FFCP PHASE1:Mm9::chr11:96143843..96143868,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15416|HGNC=|MCL_coexpression_id=249|UniProt=A2A9Z7|association_with_transcript=-1bp_to_ENSMUST00000125410_5end|description=CAGE_peak_3_at_Hoxb8_5end|id=chr11:96143843..96143868,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.08e-16!21;UBERON:0001008!3.20e-12!17;UBERON:0002113!9.54e-12!14;UBERON:0003918!9.54e-12!14;UBERON:0005095!9.54e-12!14;UBERON:0007687!9.54e-12!14;UBERON:0006554!1.56e-11!16;UBERON:0003064!5.62e-09!14;UBERON:0002342!1.05e-07!10;UBERON:0005062!1.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.80e-24,21;UBERON:0002113,1.01e-17,14;UBERON:0003918,1.01e-17,14;UBERON:0011143,1.01e-17,14;UBERON:0005095,1.01e-17,14;UBERON:0007687,1.01e-17,14;UBERON:0001008,8.39e-14,19;UBERON:0006554,9.09e-13,18;UBERON:0003064,4.34e-11,14;UBERON:0002240,1.23e-09,6;UBERON:0005174,1.23e-09,6;UBERON:0001137,1.23e-09,6;UBERON:0003103,1.59e-08,43;UBERON:0001948,2.38e-08,5;UBERON:0002315,2.38e-08,5;UBERON:0002369,7.64e-08,7;UBERON:0006858,7.64e-08,7;UBERON:0003076,4.97e-07,12;UBERON:0003057,4.97e-07,12;UBERON:0004175,6.29e-07,9;UBERON:0003104,9.77e-07,61;UBERON:0009142,9.77e-07,61|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,2.38610777810186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2798905651499,27.1668305370485,0,0,0,0,0,0,0,0,0,0,0,0,32.9984015730508,29.1861945638161,57.2246298683673,0,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,5.04703272820404,3.46970653532272,1.82679286987285,2.07553947530453,2.71300752994721,3.05730638552832,3.39299796590124,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,4.17541391786297,5.97153458928446,26.5358896355358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,4.37875387000685,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19932375802851,1.85789337488351,0.644337306610467,1.00841762311671,0,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.398282546508734,16.6907752838712,13.7098215131675,21.4144697778853,8.34970444165788,10.861339281387,8.6968416663995,7.08249215791682,2.65698266363284,3.767969468193,3.82531208157582,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.65596710964597,3.7507739709505,0,0,6.62567260774139,6.63745865304285,9.26320610251035,0,0.222798674082394,0.566153061577665,2.02405350837447,2.04579100537918,1.58115111178609,0,1.70328102249922,2.13678724400706,1.46598263418218,9.56826713240706,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0.441056796109924,4.9465875882444,0.645857706783622,2.29189114726992,1.43246812803764,1.14898629821543,0,17.4299783889879,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,3.16335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0,0.404593039154462,0.247960367176008,0,1.29614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,3.00291960721891,16.4836461840539,4.71610433973945,7.02200945649509,0,0,0,0,0,0,0,0,0,0,6.2272408550506,3.59122386060928,3.41467211508268,1.21553358534147,2.30574478890781,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,0.760437899670719,0.377252682772152,1.77918864192777,1.60062881012173,2.12511235135769,1.90517476513229,0.695305955669133,0.578727661391115,0.824171801606613,2.06078488188156,0.342869252385415,0.532427418478012,1.66905332963125,1.59881058295561,0.941093804153306,1.26921911837515,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.18635018124174,0.985044823755635,1.22769312950907,1.23949472948773,1.35034627686799,0.499621155875892,0.935726433781634,0.859484216193193,1.91288332068843,0.882365676478062,0.231867835620421|short_description=p3@Hoxb8}} | ||
|EntrezGene=15416 | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|UniProt=A2A9Z7 | |||
|association_with_transcript=-1bp_to_ENSMUST00000125410_5end | |||
|description=CAGE_peak_3_at_Hoxb8_5end | |||
|id=chr11:96143843..96143868,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.08e-16!21;UBERON:0001008!3.20e-12!17;UBERON:0002113!9.54e-12!14;UBERON:0003918!9.54e-12!14;UBERON:0005095!9.54e-12!14;UBERON:0007687!9.54e-12!14;UBERON:0006554!1.56e-11!16;UBERON:0003064!5.62e-09!14;UBERON:0002342!1.05e-07!10;UBERON:0005062!1.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.80e-24,21;UBERON:0002113,1.01e-17,14;UBERON:0003918,1.01e-17,14;UBERON:0011143,1.01e-17,14;UBERON:0005095,1.01e-17,14;UBERON:0007687,1.01e-17,14;UBERON:0001008,8.39e-14,19;UBERON:0006554,9.09e-13,18;UBERON:0003064,4.34e-11,14;UBERON:0002240,1.23e-09,6;UBERON:0005174,1.23e-09,6;UBERON:0001137,1.23e-09,6;UBERON:0003103,1.59e-08,43;UBERON:0001948,2.38e-08,5;UBERON:0002315,2.38e-08,5;UBERON:0002369,7.64e-08,7;UBERON:0006858,7.64e-08,7;UBERON:0003076,4.97e-07,12;UBERON:0003057,4.97e-07,12;UBERON:0004175,6.29e-07,9;UBERON:0003104,9.77e-07,61;UBERON:0009142,9.77e-07,61 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,2.38610777810186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2798905651499,27.1668305370485,0,0,0,0,0,0,0,0,0,0,0,0,32.9984015730508,29.1861945638161,57.2246298683673,0,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,5.04703272820404,3.46970653532272,1.82679286987285,2.07553947530453,2.71300752994721,3.05730638552832,3.39299796590124,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,4.17541391786297,5.97153458928446,26.5358896355358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,4.37875387000685,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19932375802851,1.85789337488351,0.644337306610467,1.00841762311671,0,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.398282546508734,16.6907752838712,13.7098215131675,21.4144697778853,8.34970444165788,10.861339281387,8.6968416663995,7.08249215791682,2.65698266363284,3.767969468193,3.82531208157582,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.65596710964597,3.7507739709505,0,0,6.62567260774139,6.63745865304285,9.26320610251035,0,0.222798674082394,0.566153061577665,2.02405350837447,2.04579100537918,1.58115111178609,0,1.70328102249922,2.13678724400706,1.46598263418218,9.56826713240706,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0.441056796109924,4.9465875882444,0.645857706783622,2.29189114726992,1.43246812803764,1.14898629821543,0,17.4299783889879,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,3.16335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0,0.404593039154462,0.247960367176008,0,1.29614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,3.00291960721891,16.4836461840539,4.71610433973945,7.02200945649509,0,0,0,0,0,0,0,0,0,0,6.2272408550506,3.59122386060928,3.41467211508268,1.21553358534147,2.30574478890781,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,0.760437899670719,0.377252682772152,1.77918864192777,1.60062881012173,2.12511235135769,1.90517476513229,0.695305955669133,0.578727661391115,0.824171801606613,2.06078488188156,0.342869252385415,0.532427418478012,1.66905332963125,1.59881058295561,0.941093804153306,1.26921911837515,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.18635018124174,0.985044823755635,1.22769312950907,1.23949472948773,1.35034627686799,0.499621155875892,0.935726433781634,0.859484216193193,1.91288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p3@Hoxb8 | |||
}} |
Revision as of 21:38, 12 September 2013
Short description: | p3@Hoxb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -1bp_to_ENSMUST00000125410_5end |
EntrezGene: | Hoxb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.80e-24 | 21 |
kidney | 1.01e-17 | 14 |
kidney mesenchyme | 1.01e-17 | 14 |
upper urinary tract | 1.01e-17 | 14 |
kidney rudiment | 1.01e-17 | 14 |
kidney field | 1.01e-17 | 14 |
renal system | 8.39e-14 | 19 |
urinary system structure | 9.09e-13 | 18 |
intermediate mesoderm | 4.34e-11 | 14 |
spinal cord | 1.23e-09 | 6 |
dorsal region element | 1.23e-09 | 6 |
dorsum | 1.23e-09 | 6 |
compound organ | 1.59e-08 | 43 |
regional part of spinal cord | 2.38e-08 | 5 |
gray matter of spinal cord | 2.38e-08 | 5 |
adrenal gland | 7.64e-08 | 7 |
adrenal/interrenal gland | 7.64e-08 | 7 |
posterior neural tube | 4.97e-07 | 12 |
chordal neural plate | 4.97e-07 | 12 |
internal genitalia | 6.29e-07 | 9 |
mesenchyme | 9.77e-07 | 61 |
entire embryonic mesenchyme | 9.77e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.