FFCP PHASE1:Mm9::chr12:60112864..60112937,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20334|HGNC=|MCL_coexpression_id=12|UniProt=Q01405,Q8C1E4|association_with_transcript=66bp_to_ENSMUST00000021375,ENSMUST00000134223,NM_009147,uc007npw.1_5end|description=CAGE_peak_1_at_Sec23a_5end|id=chr12:60112864..60112937,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.98e-09!43;UBERON:0005409!2.86e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-13,31;UBERON:0005409,6.17e-10,47|phase1_expression=37.4748302225218,225.438113335027,185.639689670931,227.755551114043,225.903974205803,60.2686586163684,62.1409623984098,23.3713215429253,23.3709278771767,23.1723881058774,12.8413476169129,12.7635454392538,17.9760766427766,23.2538270434533,11.9919514253639,10.9336644390506,11.8925519281785,14.3535285237998,17.5506475015346,11.8829102503448,21.5159524082207,14.7943517289319,18.5451850288644,158.552490988266,136.727931516033,182.605764588576,136.982314778586,156.21664369727,165.320374927045,147.941686169079,87.5835517088454,8.89042942843484,6.76571266343027,15.8481681015439,24.2635360591071,23.4390849955474,21.2336130512864,44.7828844888491,19.533383613095,27.2232346866375,40.58797267414,38.9335926426314,34.9567454182431,31.8518949478211,29.3993100536592,34.3232426542344,14.8654355426127,13.9536100083486,17.7945808014922,24.1093074852111,28.6972164331993,11.5002051491977,14.5970867270231,15.9579671242496,25.8792225339697,105.733628210774,72.2064268645667,63.9433394424028,18.8154308599426,29.6234948392338,18.3811107016792,26.0910289693232,16.0073063300005,3.5995988691256,6.92206453796882,3.5524005747305,8.98800331555214,6.14749288514487,23.8486108309499,19.0358373047684,23.9770455940576,17.9960120174396,22.5285911770646,20.2109818704674,17.3480302543008,27.5765635983006,15.4162233399144,23.8775322219301,23.962619187974,22.9482140650537,24.4272008418434,19.7947080811569,16.7509799400829,30.3891809417107,33.4628162631214,32.1145158166298,36.020035242173,30.9423080069999,26.3527152799481,41.4132149385185,29.2763133588695,45.6024654800135,49.6379073606658,87.4319170453264,111.111767383551,134.408066129201,61.6551004378391,55.9011458056029,37.9287566720188,30.0338638333789,24.7884418806958,14.115912515575,2.54805239706646,0,12.7729714196616,16.7217511213565,13.1436355703844,104.249882183502,31.5904218049549,31.321291342678,41.2895077703403,46.5832181817576,42.8944824896269,41.7501714330764,45.3892409543821,28.5263162318363,82.8103141910153,46.7055922851315,28.307537662396,71.5009476767549,33.7887523244402,51.8816520854688,68.9649516507052,25.4719293400046,18.6407569063975,199.256503062701,11.6220670770743,13.7977628128484,13.9777249780371,25.6141993382247,16.4700217014706,19.476424577494,32.1574992355711,31.9644321662913,26.3890816590641,23.8494656709604,53.8730234768173,46.2793930669546,39.4247503156533,22.7277204357392,38.2554102310349,41.6122809024586,43.9351596725052,46.7184935290717,34.3584320714206,42.7899825751398,33.170410494144,35.7010651619842,38.1555347491131,70.158355742261,69.5006940447598,67.0738941228379,88.4190252537401,91.2420676288076,88.6921007918236,44.1856072337055,16.1509033082044,12.0953516343916,11.0823764764281,57.1667132197985,61.4458277150472,53.8385563768434,59.4229286318878,50.174879095588,55.8446948652309,43.4838476683263,42.3871974211398,37.1313788727599,42.2918814277645,47.7727320470167,35.9134826288141,36.4037968689077,39.5190207523891,35.027875296457,37.4316108444146,30.4597652642682,415.00599142765,257.574851930292,45.8569738650753,49.4664111062734,61.0831766666722,109.312470345852,127.644997166956,160.360202812887,190.760682740894,229.096246021099,159.849192796971,168.516131818855,169.813719880754,186.055617591424,182.204376044367,180.421993568457,42.4856098134903,43.5286833043067,55.2267904798094,48.4690160271848,46.1606919458949,32.8235637086691,28.013785946046,27.8983179681448,28.2597710114475,26.4069930792653,108.501661513896,27.6962875488716,25.7492283598296,30.1315230595704,28.8061372371674,41.7236486371681,46.5965308759998,58.1146197650637,121.601420081277,81.2701783036721,67.5710570678566,97.1287873414794,75.8251545668382,71.7324013369797,62.7890947326693,115.304001605845,27.1587189544909,42.4460762365886,52.3117574378903,46.1706633308512,43.8870764299499,44.8916769944066,43.3239426412545,36.0997248536928,46.8176377995387,42.299755722916,42.7338780002065,36.2137925521781,32.1194066270566,31.2441966536065,16.5870412333199,17.9488875660174,23.6046851049137,35.043966780701,22.4770825982909,21.5669503329654,57.3772308818364,55.5436039849621,28.0802315280468,34.3586094981042,40.2841753760334,32.021818925642,37.6529759199246,26.3261173633614,27.5271277138928,38.8700291022045,34.3900366813475,23.1351347823701,48.9693293968527,40.4208920324669,45.6083486190013,38.2730685296282,29.2039304347918,27.9197731578229,28.7207379116513,36.5893854726442,29.825491180958,43.6557910080377,81.4049123479897,38.1710415951381,35.6497378384721,24.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| ||
|EntrezGene=20334 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q01405,Q8C1E4 | |||
|association_with_transcript=66bp_to_ENSMUST00000021375,ENSMUST00000134223,NM_009147,uc007npw.1_5end | |||
|description=CAGE_peak_1_at_Sec23a_5end | |||
|id=chr12:60112864..60112937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.98e-09!43;UBERON:0005409!2.86e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-13,31;UBERON:0005409,6.17e-10,47 | |||
|phase1_expression=37.4748302225218,225.438113335027,185.639689670931,227.755551114043,225.903974205803,60.2686586163684,62.1409623984098,23.3713215429253,23.3709278771767,23.1723881058774,12.8413476169129,12.7635454392538,17.9760766427766,23.2538270434533,11.9919514253639,10.9336644390506,11.8925519281785,14.3535285237998,17.5506475015346,11.8829102503448,21.5159524082207,14.7943517289319,18.5451850288644,158.552490988266,136.727931516033,182.605764588576,136.982314778586,156.21664369727,165.320374927045,147.941686169079,87.5835517088454,8.89042942843484,6.76571266343027,15.8481681015439,24.2635360591071,23.4390849955474,21.2336130512864,44.7828844888491,19.533383613095,27.2232346866375,40.58797267414,38.9335926426314,34.9567454182431,31.8518949478211,29.3993100536592,34.3232426542344,14.8654355426127,13.9536100083486,17.7945808014922,24.1093074852111,28.6972164331993,11.5002051491977,14.5970867270231,15.9579671242496,25.8792225339697,105.733628210774,72.2064268645667,63.9433394424028,18.8154308599426,29.6234948392338,18.3811107016792,26.0910289693232,16.0073063300005,3.5995988691256,6.92206453796882,3.5524005747305,8.98800331555214,6.14749288514487,23.8486108309499,19.0358373047684,23.9770455940576,17.9960120174396,22.5285911770646,20.2109818704674,17.3480302543008,27.5765635983006,15.4162233399144,23.8775322219301,23.962619187974,22.9482140650537,24.4272008418434,19.7947080811569,16.7509799400829,30.3891809417107,33.4628162631214,32.1145158166298,36.020035242173,30.9423080069999,26.3527152799481,41.4132149385185,29.2763133588695,45.6024654800135,49.6379073606658,87.4319170453264,111.111767383551,134.408066129201,61.6551004378391,55.9011458056029,37.9287566720188,30.0338638333789,24.7884418806958,14.115912515575,2.54805239706646,0,12.7729714196616,16.7217511213565,13.1436355703844,104.249882183502,31.5904218049549,31.321291342678,41.2895077703403,46.5832181817576,42.8944824896269,41.7501714330764,45.3892409543821,28.5263162318363,82.8103141910153,46.7055922851315,28.307537662396,71.5009476767549,33.7887523244402,51.8816520854688,68.9649516507052,25.4719293400046,18.6407569063975,199.256503062701,11.6220670770743,13.7977628128484,13.9777249780371,25.6141993382247,16.4700217014706,19.476424577494,32.1574992355711,31.9644321662913,26.3890816590641,23.8494656709604,53.8730234768173,46.2793930669546,39.4247503156533,22.7277204357392,38.2554102310349,41.6122809024586,43.9351596725052,46.7184935290717,34.3584320714206,42.7899825751398,33.170410494144,35.7010651619842,38.1555347491131,70.158355742261,69.5006940447598,67.0738941228379,88.4190252537401,91.2420676288076,88.6921007918236,44.1856072337055,16.1509033082044,12.0953516343916,11.0823764764281,57.1667132197985,61.4458277150472,53.8385563768434,59.4229286318878,50.174879095588,55.8446948652309,43.4838476683263,42.3871974211398,37.1313788727599,42.2918814277645,47.7727320470167,35.9134826288141,36.4037968689077,39.5190207523891,35.027875296457,37.4316108444146,30.4597652642682,415.00599142765,257.574851930292,45.8569738650753,49.4664111062734,61.0831766666722,109.312470345852,127.644997166956,160.360202812887,190.760682740894,229.096246021099,159.849192796971,168.516131818855,169.813719880754,186.055617591424,182.204376044367,180.421993568457,42.4856098134903,43.5286833043067,55.2267904798094,48.4690160271848,46.1606919458949,32.8235637086691,28.013785946046,27.8983179681448,28.2597710114475,26.4069930792653,108.501661513896,27.6962875488716,25.7492283598296,30.1315230595704,28.8061372371674,41.7236486371681,46.5965308759998,58.1146197650637,121.601420081277,81.2701783036721,67.5710570678566,97.1287873414794,75.8251545668382,71.7324013369797,62.7890947326693,115.304001605845,27.1587189544909,42.4460762365886,52.3117574378903,46.1706633308512,43.8870764299499,44.8916769944066,43.3239426412545,36.0997248536928,46.8176377995387,42.299755722916,42.7338780002065,36.2137925521781,32.1194066270566,31.2441966536065,16.5870412333199,17.9488875660174,23.6046851049137,35.043966780701,22.4770825982909,21.5669503329654,57.3772308818364,55.5436039849621,28.0802315280468,34.3586094981042,40.2841753760334,32.021818925642,37.6529759199246,26.3261173633614,27.5271277138928,38.8700291022045,34.3900366813475,23.1351347823701,48.9693293968527,40.4208920324669,45.6083486190013,38.2730685296282,29.2039304347918,27.9197731578229,28.7207379116513,36.5893854726442,29.825491180958,43.6557910080377,81.4049123479897,38.1710415951381,35.6497378384721,24.3348303610578,16.8669773719998,18.5643977846736,55.4916557378674,33.1312413017611,29.2350625349025,35.5799478152443,41.8522951395766,37.4574516964348,42.9472943771536,32.5777495552621,64.0653763013929,59.3129798418696,31.3150325238046,25.5573692059294,55.2208339299997,52.7738093121364,38.5572671130131,30.0377846533462,200.538815601337,23.9198639593557,13.6696704638282,33.8474463459685,35.0017656728755,20.3437933565066,12.0290920394502,12.5827995263587,20.2274331692688,20.7128149439014,22.1119958087078,25.7761066864081,39.7001671944325,52.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| |||
|short_description=p1@Sec23a | |||
}} | |||
Revision as of 23:00, 12 September 2013
| Short description: | p1@Sec23a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sec23a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 66bp_to_ENSMUST00000021375, ENSMUST00000134223, NM_009147, uc007npw.1_5end |
| EntrezGene: | Sec23a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.95e-13 | 31 |
| gastrointestinal system | 6.17e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
