FFCP PHASE1:Mm9::chr12:60167927..60167988,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18949|HGNC=|MCL_coexpression_id=1595|UniProt=Q3TUQ5,O35691,Q9CV89|association_with_transcript=21bp_to_ENSMUST00000021381,NM_008891,uc007nqa.1,uc007nqb.1_5end|description=CAGE_peak_1_at_Pnn_5end|id=chr12:60167927..60167988,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.19e-08!23;UBERON:0000974!2.19e-08!23;UBERON:0004807!2.19e-08!23;UBERON:0005058!2.19e-08!23;UBERON:0003351!2.19e-08!23;UBERON:0009113!2.19e-08!23;UBERON:0003295!2.19e-08!23;UBERON:0009722!2.19e-08!23;UBERON:0005562!2.19e-08!23;UBERON:0007690!2.19e-08!23;UBERON:0004177!2.86e-08!29;UBERON:0003408!4.05e-08!24;UBERON:0006562!6.99e-08!24;UBERON:0001557!6.99e-08!24;UBERON:0001042!6.99e-08!24;UBERON:0008814!6.99e-08!24;UBERON:0009145!6.99e-08!24;UBERON:0000065!4.59e-07!41;UBERON:0001004!6.01e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0007811,6.97e-09,36;UBERON:0000153,8.11e-09,43;UBERON:0002370,2.19e-08,23;UBERON:0000974,2.19e-08,23;UBERON:0004807,2.19e-08,23;UBERON:0005058,2.19e-08,23;UBERON:0003351,2.19e-08,23;UBERON:0009113,2.19e-08,23;UBERON:0003295,2.19e-08,23;UBERON:0009722,2.19e-08,23;UBERON:0005562,2.19e-08,23;UBERON:0007690,2.19e-08,23;UBERON:0004177,2.86e-08,29;UBERON:0005057,2.86e-08,29;UBERON:0003408,4.05e-08,24;UBERON:0006562,6.99e-08,24;UBERON:0001557,6.99e-08,24;UBERON:0001042,6.99e-08,24;UBERON:0008814,6.99e-08,24;UBERON:0009145,6.99e-08,24;UBERON:0000065,4.59e-07,41;UBERON:0001004,6.01e-07,42|phase1_expression=94.3276709447236,50.252458700068,35.9449399117733,79.2456233623895,64.1146534331324,62.6189684231349,60.9728991954322,104.84813863456,108.12573861248,115.627876003065,74.8222521145457,83.7607669451032,105.802051097485,112.684898718088,81.6118916448374,99.2128810210147,76.252244715968,92.5881455326428,91.1810983478163,81.9072027970198,61.4862987792234,92.1420027144216,101.606717975046,38.558173893211,38.9995777814189,25.2662064210609,30.5841017272943,36.845580789287,42.3752225387714,48.3897849139067,34.1464986409169,53.342576570609,43.6695999185045,63.3926724061755,74.5237178958288,49.0392203807552,68.600903704156,40.59756818148,43.7547792933328,42.9289470058515,28.2351114254887,36.2014107027976,46.6089938909907,41.5459499319405,36.1915644453667,28.0826530807373,8.60630478782843,6.75877984779384,5.71184075109627,9.3326351555656,6.7193482380174,1.43752564364972,71.1398249684802,102.2760620236,105.869546729876,30.6138728882777,28.9398774338144,31.455997628924,26.7057728334669,21.1596391708813,17.747279298173,8.80995783379743,4.4464739805557,4.49949858640699,5.93319817540185,7.104801149461,5.99200221036809,11.5265491596466,45.6234294157302,25.2461104680262,33.2313438935184,17.9960120174396,19.6573001446936,40.5444545401498,26.357504530015,25.7381260250806,44.0463523997555,60.523798252379,65.4363831671597,24.6627358055462,28.7271200911566,38.0266760506435,25.1264699101243,48.3975844627245,58.0633341551878,50.9707452869445,62.0740528284089,44.3630681064215,39.5290729199221,52.9000920747499,60.0019491612473,59.3692475117157,14.2793980078628,25.9057531986152,37.0372557945171,41.6665005000522,42.2737704596573,54.1968425798224,39.4874726996361,43.8141072392822,84.7877387055617,51.3305909657271,124.854567456256,56.8853362522665,33.7726023977494,41.8043778033913,33.3646133709757,51.8394813924532,288.974678150244,59.0799713478003,55.1683339116312,55.7171825311218,41.7414050033466,47.0254638524182,78.7844337809222,40.2133092254962,52.4053331596873,87.9164090073063,74.3072863637894,84.1187619726528,80.3863127195832,80.0044167673117,52.1896931410742,109.207237285307,96.9738252546297,61.5651503052705,68.2946209683746,38.9936775145715,64.4246051260438,90.9229181187274,97.4476284003674,77.6543896057502,91.9530653817143,101.519036560141,72.5180275512865,89.8816597395377,91.5535881014343,78.6252054255788,73.795045462633,59.7654870717586,101.233704624983,79.7760302384151,82.4684554508499,96.3003785970219,131.922771854425,132.469586774535,72.4314330846704,122.366694359554,51.5207503109493,107.223147455154,82.8729794812199,66.6355026579827,101.209198718118,91.938571961852,86.8400615641521,85.5847347319521,61.7947604835647,48.8961023517959,54.2752283845582,78.2935420184197,95.9211585322684,72.204886645867,94.4611494984989,88.7406685180791,84.3841107493959,98.1293246846721,73.7751853848953,91.4272630734937,94.4573538503378,95.2171291658752,82.6901857367728,72.8075937378155,68.9387362013899,64.6874938424992,99.4671456708322,103.624944665939,74.6746449543383,51.8323110660547,95.76642449032,107.293342399523,91.7536324613305,87.5306496865307,67.8253033726855,63.7255847477073,53.6217839545298,34.5867804920423,73.641216178479,71.226416990732,69.797143188645,66.5126362404124,73.2707989075213,63.7252074413975,22.9498160153229,105.45137713878,104.818194175965,97.7526373657508,88.8302391227726,115.794238638916,96.1827729659953,96.2418164827006,82.4243321167218,49.1120712408766,43.2820835547237,81.9209469066022,86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| ||
|EntrezGene=18949 | |||
|HGNC= | |||
|MCL_coexpression_id=1595 | |||
|UniProt=Q3TUQ5,O35691,Q9CV89 | |||
|association_with_transcript=21bp_to_ENSMUST00000021381,NM_008891,uc007nqa.1,uc007nqb.1_5end | |||
|description=CAGE_peak_1_at_Pnn_5end | |||
|id=chr12:60167927..60167988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.19e-08!23;UBERON:0000974!2.19e-08!23;UBERON:0004807!2.19e-08!23;UBERON:0005058!2.19e-08!23;UBERON:0003351!2.19e-08!23;UBERON:0009113!2.19e-08!23;UBERON:0003295!2.19e-08!23;UBERON:0009722!2.19e-08!23;UBERON:0005562!2.19e-08!23;UBERON:0007690!2.19e-08!23;UBERON:0004177!2.86e-08!29;UBERON:0003408!4.05e-08!24;UBERON:0006562!6.99e-08!24;UBERON:0001557!6.99e-08!24;UBERON:0001042!6.99e-08!24;UBERON:0008814!6.99e-08!24;UBERON:0009145!6.99e-08!24;UBERON:0000065!4.59e-07!41;UBERON:0001004!6.01e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,6.97e-09,36;UBERON:0000153,8.11e-09,43;UBERON:0002370,2.19e-08,23;UBERON:0000974,2.19e-08,23;UBERON:0004807,2.19e-08,23;UBERON:0005058,2.19e-08,23;UBERON:0003351,2.19e-08,23;UBERON:0009113,2.19e-08,23;UBERON:0003295,2.19e-08,23;UBERON:0009722,2.19e-08,23;UBERON:0005562,2.19e-08,23;UBERON:0007690,2.19e-08,23;UBERON:0004177,2.86e-08,29;UBERON:0005057,2.86e-08,29;UBERON:0003408,4.05e-08,24;UBERON:0006562,6.99e-08,24;UBERON:0001557,6.99e-08,24;UBERON:0001042,6.99e-08,24;UBERON:0008814,6.99e-08,24;UBERON:0009145,6.99e-08,24;UBERON:0000065,4.59e-07,41;UBERON:0001004,6.01e-07,42 | |||
|phase1_expression=94.3276709447236,50.252458700068,35.9449399117733,79.2456233623895,64.1146534331324,62.6189684231349,60.9728991954322,104.84813863456,108.12573861248,115.627876003065,74.8222521145457,83.7607669451032,105.802051097485,112.684898718088,81.6118916448374,99.2128810210147,76.252244715968,92.5881455326428,91.1810983478163,81.9072027970198,61.4862987792234,92.1420027144216,101.606717975046,38.558173893211,38.9995777814189,25.2662064210609,30.5841017272943,36.845580789287,42.3752225387714,48.3897849139067,34.1464986409169,53.342576570609,43.6695999185045,63.3926724061755,74.5237178958288,49.0392203807552,68.600903704156,40.59756818148,43.7547792933328,42.9289470058515,28.2351114254887,36.2014107027976,46.6089938909907,41.5459499319405,36.1915644453667,28.0826530807373,8.60630478782843,6.75877984779384,5.71184075109627,9.3326351555656,6.7193482380174,1.43752564364972,71.1398249684802,102.2760620236,105.869546729876,30.6138728882777,28.9398774338144,31.455997628924,26.7057728334669,21.1596391708813,17.747279298173,8.80995783379743,4.4464739805557,4.49949858640699,5.93319817540185,7.104801149461,5.99200221036809,11.5265491596466,45.6234294157302,25.2461104680262,33.2313438935184,17.9960120174396,19.6573001446936,40.5444545401498,26.357504530015,25.7381260250806,44.0463523997555,60.523798252379,65.4363831671597,24.6627358055462,28.7271200911566,38.0266760506435,25.1264699101243,48.3975844627245,58.0633341551878,50.9707452869445,62.0740528284089,44.3630681064215,39.5290729199221,52.9000920747499,60.0019491612473,59.3692475117157,14.2793980078628,25.9057531986152,37.0372557945171,41.6665005000522,42.2737704596573,54.1968425798224,39.4874726996361,43.8141072392822,84.7877387055617,51.3305909657271,124.854567456256,56.8853362522665,33.7726023977494,41.8043778033913,33.3646133709757,51.8394813924532,288.974678150244,59.0799713478003,55.1683339116312,55.7171825311218,41.7414050033466,47.0254638524182,78.7844337809222,40.2133092254962,52.4053331596873,87.9164090073063,74.3072863637894,84.1187619726528,80.3863127195832,80.0044167673117,52.1896931410742,109.207237285307,96.9738252546297,61.5651503052705,68.2946209683746,38.9936775145715,64.4246051260438,90.9229181187274,97.4476284003674,77.6543896057502,91.9530653817143,101.519036560141,72.5180275512865,89.8816597395377,91.5535881014343,78.6252054255788,73.795045462633,59.7654870717586,101.233704624983,79.7760302384151,82.4684554508499,96.3003785970219,131.922771854425,132.469586774535,72.4314330846704,122.366694359554,51.5207503109493,107.223147455154,82.8729794812199,66.6355026579827,101.209198718118,91.938571961852,86.8400615641521,85.5847347319521,61.7947604835647,48.8961023517959,54.2752283845582,78.2935420184197,95.9211585322684,72.204886645867,94.4611494984989,88.7406685180791,84.3841107493959,98.1293246846721,73.7751853848953,91.4272630734937,94.4573538503378,95.2171291658752,82.6901857367728,72.8075937378155,68.9387362013899,64.6874938424992,99.4671456708322,103.624944665939,74.6746449543383,51.8323110660547,95.76642449032,107.293342399523,91.7536324613305,87.5306496865307,67.8253033726855,63.7255847477073,53.6217839545298,34.5867804920423,73.641216178479,71.226416990732,69.797143188645,66.5126362404124,73.2707989075213,63.7252074413975,22.9498160153229,105.45137713878,104.818194175965,97.7526373657508,88.8302391227726,115.794238638916,96.1827729659953,96.2418164827006,82.4243321167218,49.1120712408766,43.2820835547237,81.9209469066022,86.6825168449225,78.0271529975442,81.1440485554012,71.147262126963,57.8000683543823,63.86854251408,75.0686099968414,61.2271951409422,218.527673921579,70.3346391093471,69.2723634314325,64.4076138765135,55.254403364749,59.8229966490575,64.1093569878118,91.1453690616032,101.038285394056,99.8101104358106,95.7536213017089,97.1536293162531,74.9837468790943,84.6880031702847,118.699263511962,104.088404134924,99.180866104957,87.9946000023513,87.723970787875,66.5385669474953,57.3006878969235,34.8099637643974,49.1764273019036,72.2954275318399,74.816574934311,81.4621221815812,41.4755411802989,57.0584295481883,88.6578096559681,82.7730137908873,99.0947629570875,80.0545473141049,94.6894364850175,110.399847007645,90.2727864735014,72.4794527620054,99.2172322645774,106.357355735618,87.2931524030852,50.926762648835,79.6517231238987,93.7030298484001,80.9745343873773,71.6202876657195,65.3018883043862,77.70529285943,46.9530009680429,72.5546949147669,88.6409045566999,98.1541069589265,80.2119101365623,99.551578749782,75.9013981739991,64.9753922463577,94.6422103995531,103.715190162035,40.6186267077849,55.5132920731824,92.2169214939823,52.0836947398046,68.2878435498802,29.5331000641161,52.3317908982074,36.8587803303047,94.1656259694687,181.209991982687,122.551499862192,96.6816186598338,70.4296829618505,94.7092991529003,74.6190941772418,84.7393630188029,73.9870913854702,67.4885058239738,83.52273184374,97.3864922714253,118.923978117292,84.1903677400003,81.4196679670567,78.6527162058958,82.2289844136322,93.5577205654811,85.8852222572782,92.510357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| |||
|short_description=p1@Pnn | |||
}} |
Revision as of 23:00, 12 September 2013
Short description: | p1@Pnn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pnn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1595 |
Association with transcript: | 21bp_to_ENSMUST00000021381, NM_008891, uc007nqa.1, uc007nqb.1_5end |
EntrezGene: | Pnn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
craniocervical region | 6.97e-09 | 36 |
anterior region of body | 8.11e-09 | 43 |
thymus | 2.19e-08 | 23 |
neck | 2.19e-08 | 23 |
respiratory system epithelium | 2.19e-08 | 23 |
hemolymphoid system gland | 2.19e-08 | 23 |
pharyngeal epithelium | 2.19e-08 | 23 |
thymic region | 2.19e-08 | 23 |
pharyngeal gland | 2.19e-08 | 23 |
entire pharyngeal arch endoderm | 2.19e-08 | 23 |
thymus primordium | 2.19e-08 | 23 |
early pharyngeal endoderm | 2.19e-08 | 23 |
hemopoietic organ | 2.86e-08 | 29 |
immune organ | 2.86e-08 | 29 |
gland of gut | 4.05e-08 | 24 |
pharynx | 6.99e-08 | 24 |
upper respiratory tract | 6.99e-08 | 24 |
chordate pharynx | 6.99e-08 | 24 |
pharyngeal arch system | 6.99e-08 | 24 |
pharyngeal region of foregut | 6.99e-08 | 24 |
respiratory tract | 4.59e-07 | 41 |
respiratory system | 6.01e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.