FFCP PHASE1:Mm9::chr12:68053211..68053223,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=64|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:68053211..68053223,+|id=chr12:68053211..68053223,+|ontology_enrichment_celltype=CL:0000839!9.27e-07!13|ontology_enrichment_celltype_v019_2=CL:0002476,6.19e-10,2;CL:0000764,3.18e-07,3;CL:0000765,3.18e-07,3;CL:0000038,3.18e-07,3;CL:0000547,3.18e-07,3;CL:0002610,3.64e-07,3;CL:0002614,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,3.18e-07,3;DOID:0060083,3.18e-07,3;DOID:1240,3.18e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.64e-07,3;UBERON:0002275,3.64e-07,3;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,364.507866335509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,13.2139057199266,0.127687338085188,0,0,0,0,0,1.12552522006336,0.15279824777681,0.589257170947335,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr12:68053211..68053223,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:68053211..68053223,+ | |||
|id=chr12:68053211..68053223,+ | |||
|ontology_enrichment_celltype=CL:0000839!9.27e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,6.19e-10,2;CL:0000764,3.18e-07,3;CL:0000765,3.18e-07,3;CL:0000038,3.18e-07,3;CL:0000547,3.18e-07,3;CL:0002610,3.64e-07,3;CL:0002614,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.18e-07,3;DOID:0060083,3.18e-07,3;DOID:1240,3.18e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.64e-07,3;UBERON:0002275,3.64e-07,3;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,364.507866335509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,13.2139057199266,0.127687338085188,0,0,0,0,0,1.12552522006336,0.15279824777681,0.589257170947335,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr12:68053211..68053223,+ | |||
}} |
Revision as of 23:02, 12 September 2013
Short description: | p@chr12:68053211..68053223, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:68053211..68053223, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 6.19e-10 | 2 |
erythroid lineage cell | 3.18e-07 | 3 |
erythroblast | 3.18e-07 | 3 |
erythroid progenitor cell | 3.18e-07 | 3 |
proerythroblast | 3.18e-07 | 3 |
raphe nuclei neuron | 3.64e-07 | 3 |
neuron of the substantia nigra | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.64e-07 | 3 |
reticular formation | 3.64e-07 | 3 |
substantia nigra | 5.46e-07 | 3 |
telencephalic nucleus | 5.46e-07 | 3 |
midbrain nucleus | 5.46e-07 | 3 |
neural nucleus | 5.46e-07 | 3 |
nucleus of brain | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.18e-07 | 3 |
immune system cancer | 3.18e-07 | 3 |
leukemia | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.