FFCP PHASE1:Mm9::chr12:74203533..74203537,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:74203533..74203537,-|id=chr12:74203533..74203537,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002374,1.47e-08,1;CL:0000202,1.47e-08,1;CL:0000199,1.47e-08,1;CL:0000855,1.47e-08,1;CL:0000589,1.47e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001894!2.15e-07!10;UBERON:0006222!2.15e-07!10;UBERON:0000007!4.57e-07!8;UBERON:0003296!4.57e-07!8;UBERON:0010133!4.57e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002102,4.03e-10,7;UBERON:0004710,4.03e-10,7;UBERON:0005419,4.03e-10,7;UBERON:0005417,4.03e-10,7;UBERON:0005729,4.03e-10,7;UBERON:0000026,4.78e-10,12;UBERON:0004708,4.78e-10,12;UBERON:0002101,4.78e-10,12;UBERON:0004357,4.78e-10,12;UBERON:0004347,4.78e-10,12;UBERON:0005732,4.78e-10,12;UBERON:0005733,4.78e-10,12;UBERON:0010707,2.71e-09,13;UBERON:0010708,6.32e-09,8;UBERON:0001374,2.44e-08,1;UBERON:0004252,2.44e-08,1;UBERON:0003663,2.44e-08,1;UBERON:0005090,2.44e-08,1;UBERON:0001630,2.44e-08,1;UBERON:0003661,2.44e-08,1;UBERON:0010890,2.44e-08,1;UBERON:0001383,2.44e-08,1;UBERON:0000998,2.89e-08,1;UBERON:0007194,2.89e-08,1;UBERON:0006868,2.89e-08,1|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0,0.704217098883403,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,0,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0,0,0.910843100738926,0,0,0.30140963567143,0.0680364991513279,0,0,0,1.29340795759705,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,0,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,0,0.407302655690628,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,4.42624352517024,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,1.26042765821917,0.905510786479282,1.28602221018955,0.532020700926821,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.496375471371293,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.924398614483445,0.77952493786677,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0.503653849092235,0.19318959403219,0,0,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.45302286617847,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.73171189149109,0.526139422875686,0.543216455383447,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr12:74203533..74203537,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:74203533..74203537,- | |||
|id=chr12:74203533..74203537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002374,1.47e-08,1;CL:0000202,1.47e-08,1;CL:0000199,1.47e-08,1;CL:0000855,1.47e-08,1;CL:0000589,1.47e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!2.15e-07!10;UBERON:0006222!2.15e-07!10;UBERON:0000007!4.57e-07!8;UBERON:0003296!4.57e-07!8;UBERON:0010133!4.57e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,4.03e-10,7;UBERON:0004710,4.03e-10,7;UBERON:0005419,4.03e-10,7;UBERON:0005417,4.03e-10,7;UBERON:0005729,4.03e-10,7;UBERON:0000026,4.78e-10,12;UBERON:0004708,4.78e-10,12;UBERON:0002101,4.78e-10,12;UBERON:0004357,4.78e-10,12;UBERON:0004347,4.78e-10,12;UBERON:0005732,4.78e-10,12;UBERON:0005733,4.78e-10,12;UBERON:0010707,2.71e-09,13;UBERON:0010708,6.32e-09,8;UBERON:0001374,2.44e-08,1;UBERON:0004252,2.44e-08,1;UBERON:0003663,2.44e-08,1;UBERON:0005090,2.44e-08,1;UBERON:0001630,2.44e-08,1;UBERON:0003661,2.44e-08,1;UBERON:0010890,2.44e-08,1;UBERON:0001383,2.44e-08,1;UBERON:0000998,2.89e-08,1;UBERON:0007194,2.89e-08,1;UBERON:0006868,2.89e-08,1 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0,0.704217098883403,0,0,0,0.865964164044856,0.760079596425296,2.02209778005913,0,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0,0,0.910843100738926,0,0,0.30140963567143,0.0680364991513279,0,0,0,1.29340795759705,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,0,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,0,0.407302655690628,0.387904974335251,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,4.42624352517024,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,1.26042765821917,0.905510786479282,1.28602221018955,0.532020700926821,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0.496375471371293,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.924398614483445,0.77952493786677,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0.503653849092235,0.19318959403219,0,0,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.45302286617847,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.73171189149109,0.526139422875686,0.543216455383447,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr12:74203533..74203537,- | |||
}} |
Revision as of 23:09, 12 September 2013
Short description: | p@chr12:74203533..74203537, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74203533..74203537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ear hair cell | 1.47e-08 | 1 |
auditory hair cell | 1.47e-08 | 1 |
mechanoreceptor cell | 1.47e-08 | 1 |
sensory hair cell | 1.47e-08 | 1 |
cochlear inner hair cell | 1.47e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
forelimb | 4.03e-10 | 7 |
pectoral appendage | 4.03e-10 | 7 |
pectoral appendage bud | 4.03e-10 | 7 |
forelimb bud | 4.03e-10 | 7 |
forelimb/pectoral fin field | 4.03e-10 | 7 |
appendage | 4.78e-10 | 12 |
paired limb/fin | 4.78e-10 | 12 |
limb | 4.78e-10 | 12 |
paired limb/fin bud | 4.78e-10 | 12 |
limb bud | 4.78e-10 | 12 |
limb/fin field | 4.78e-10 | 12 |
limb field | 4.78e-10 | 12 |
appendage girdle complex | 2.71e-09 | 13 |
pectoral complex | 6.32e-09 | 8 |
biceps femoris | 2.44e-08 | 1 |
hindlimb stylopod muscle | 2.44e-08 | 1 |
hindlimb muscle | 2.44e-08 | 1 |
muscle structure | 2.44e-08 | 1 |
muscle organ | 2.44e-08 | 1 |
limb muscle | 2.44e-08 | 1 |
pelvic complex muscle | 2.44e-08 | 1 |
muscle of leg | 2.44e-08 | 1 |
seminal vesicle | 2.89e-08 | 1 |
vesicular gland | 2.89e-08 | 1 |
seminal fluid secreting gland | 2.89e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.