FFCP PHASE1:Mm9::chr13:112280043..112280098,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73274|HGNC=|MCL_coexpression_id=298|UniProt=Q6NXH3|association_with_transcript=137bp_to_ENSMUST00000091236_5end|description=CAGE_peak_1_at_Gpbp1_5end|id=chr13:112280043..112280098,-|ontology_enrichment_celltype=CL:0000838!2.15e-07!12;CL:0000542!9.18e-07!13;CL:0000051!9.18e-07!13|ontology_enrichment_celltype_v019_2=CL:0000838,2.15e-07,12;CL:0000542,9.18e-07,13;CL:0000051,9.18e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.34e-07,43;UBERON:0007811,8.14e-07,36|phase1_expression=34.7522998217403,40.4811472861659,33.6699437148257,26.616850595001,30.5546395267272,34.4152507419374,27.566291590272,40.4156002372134,67.4377979106484,51.9623248434826,40.9210944058957,40.3647124516402,49.8194124099809,43.7102012094987,25.3163418979904,48.5940641735582,48.2697695908421,42.1141990753247,49.4983105316717,47.9560306531774,39.2900000497942,31.5745224818815,30.0379757509776,22.3989391910769,23.8585652309857,31.5827580263261,32.3071497119306,36.845580789287,25.2731147876977,36.7963989449499,25.0555477040494,6.35030673459631,11.6862309641068,0,23.9746844393558,29.4235322284531,23.6836453264348,33.9010620896895,39.06676722619,59.681706813013,49.4114449946052,51.2284113718834,50.49307671524,14.8558245211181,18.9574861380492,22.5762505158868,3.9119567217402,3.48840250208714,3.95435128922049,6.80504646759992,4.05960622713551,1.43752564364972,81.5423465440599,36.9934692425786,38.9868807005258,13.8920095459411,18.3381401560804,11.3447860301037,15.1737345644698,9.52183762689659,8.23980824558033,6.09920157724438,3.55717918444456,4.94944844504769,2.96659908770092,4.2628806896766,3.29560121570245,4.61061966385865,25.0928861786516,12.0155285115205,17.6672967535161,13.7112472513826,10.6016899656774,20.5784542681123,15.3352753629178,10.1114066527102,18.7196997698961,28.2189017168265,29.4924543851987,16.8814448294648,18.3890163640843,16.6692278578163,19.821992929098,21.3849791812038,29.6428600687012,20.0347438122094,26.1963892670349,24.2319279572891,30.44192971994,22.2180386713949,28.1168554040627,17.2084775396277,10.879541339324,14.5719861742211,12.3457519315057,12.0967259516281,30.0551059081949,23.0080935480378,17.4056623083922,11.3068663843309,26.6194063377926,11.5493829672886,10.1922095882658,14.2213340630666,14.7213907887626,15.9616715249312,18.704404465547,27.4041311325744,68.1006633992062,20.0396887737513,19.2568712710411,11.5696881758614,15.681853813412,19.8953885529462,25.5167494484479,24.379318717957,44.7422891599217,20.9669067533872,30.0767587662957,23.1326595424795,38.4264242121085,41.2143965164939,11.1835056730873,37.475942017478,40.8421078286237,23.5020490791904,43.3730750711431,26.9956228947033,43.203877204842,25.6141993382247,22.8750301409313,27.5183031127173,25.0307021076878,28.8958466783273,26.5968697036237,26.76980840618,28.8205399696395,29.1112311227618,19.2069296409593,28.1992086887875,27.8457747940186,30.5769798896519,30.6105620669094,29.8395539314716,32.9296655892427,29.85049682637,33.9200242906218,18.1092359517311,25.2214551731425,34.4173065905431,28.3281309903958,25.2075092291711,20.5754964426942,30.2979384874285,23.6649456869135,27.864797354589,12.6398373716382,32.1684883893394,24.438060948021,25.6835957944022,16.1822981386956,22.1476335597048,25.0949419720323,19.0861304794982,27.6138132068407,26.5088697015465,21.4618721119695,24.4039565547384,21.5573403386659,24.4609521477852,23.6720923873899,27.1931976611118,21.9550115291051,27.2439030083555,31.333202336055,28.0929591795446,23.7901523748335,16.3959351331397,21.9686898051291,27.6361639513922,26.0312271870629,27.2272758241512,25.1287189544703,20.1639163679313,26.0990983849481,17.6227881554692,20.6094871216221,17.7071260116624,23.5906545414135,33.2563181202062,24.2074615859658,21.9055400579804,7.58671603812327,25.3631697993598,20.2873924211545,17.3103628668517,17.8436288194216,23.2149563836954,23.5239918102237,23.0271830848179,17.7408562460754,17.5223972768957,22.8268522857105,26.3615267031429,22.4077254429051,27.4331777109522,18.2574109249653,25.8059560935086,24.1894559192349,26.7557407829254,25.1309601501305,18.6701760967895,33.0666875012915,18.9791883310937,19.3463357331028,17.4279425783507,20.2719077279761,16.4030797263545,27.1587189544909,21.9810037653762,32.2670653355211,21.8971160649993,23.4690248288502,31.4911763990614,26.4228441383475,30.8311163615322,20.1772984455924,23.2537924131214,23.7587605299656,28.6760800752541,34.5369963731791,32.6906872394216,16.5870412333199,13.5976420954677,20.1623351937805,24.8343071674259,22.4770825982909,27.7791697223522,13.4426655208874,25.752034574846,23.347608236803,21.8645696806118,19.1726823982191,23.1799734013975,23.6166594527338,24.6276581786284,16.5972387686707,21.6269334854371,19.3691011193797,33.0960955914461,21.8587731220734,11.3961986347043,29.3196526836437,26.2302495526331,18.5843193675948,18.2085477116236,16.3254720760966,21.8781892516842,10.0402643579463,21.213025208131,18.6068371081119,18.54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| ||
|EntrezGene=73274 | |||
|HGNC= | |||
|MCL_coexpression_id=298 | |||
|UniProt=Q6NXH3 | |||
|association_with_transcript=137bp_to_ENSMUST00000091236_5end | |||
|description=CAGE_peak_1_at_Gpbp1_5end | |||
|id=chr13:112280043..112280098,- | |||
|ontology_enrichment_celltype=CL:0000838!2.15e-07!12;CL:0000542!9.18e-07!13;CL:0000051!9.18e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.15e-07,12;CL:0000542,9.18e-07,13;CL:0000051,9.18e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.34e-07,43;UBERON:0007811,8.14e-07,36 | |||
|phase1_expression=34.7522998217403,40.4811472861659,33.6699437148257,26.616850595001,30.5546395267272,34.4152507419374,27.566291590272,40.4156002372134,67.4377979106484,51.9623248434826,40.9210944058957,40.3647124516402,49.8194124099809,43.7102012094987,25.3163418979904,48.5940641735582,48.2697695908421,42.1141990753247,49.4983105316717,47.9560306531774,39.2900000497942,31.5745224818815,30.0379757509776,22.3989391910769,23.8585652309857,31.5827580263261,32.3071497119306,36.845580789287,25.2731147876977,36.7963989449499,25.0555477040494,6.35030673459631,11.6862309641068,0,23.9746844393558,29.4235322284531,23.6836453264348,33.9010620896895,39.06676722619,59.681706813013,49.4114449946052,51.2284113718834,50.49307671524,14.8558245211181,18.9574861380492,22.5762505158868,3.9119567217402,3.48840250208714,3.95435128922049,6.80504646759992,4.05960622713551,1.43752564364972,81.5423465440599,36.9934692425786,38.9868807005258,13.8920095459411,18.3381401560804,11.3447860301037,15.1737345644698,9.52183762689659,8.23980824558033,6.09920157724438,3.55717918444456,4.94944844504769,2.96659908770092,4.2628806896766,3.29560121570245,4.61061966385865,25.0928861786516,12.0155285115205,17.6672967535161,13.7112472513826,10.6016899656774,20.5784542681123,15.3352753629178,10.1114066527102,18.7196997698961,28.2189017168265,29.4924543851987,16.8814448294648,18.3890163640843,16.6692278578163,19.821992929098,21.3849791812038,29.6428600687012,20.0347438122094,26.1963892670349,24.2319279572891,30.44192971994,22.2180386713949,28.1168554040627,17.2084775396277,10.879541339324,14.5719861742211,12.3457519315057,12.0967259516281,30.0551059081949,23.0080935480378,17.4056623083922,11.3068663843309,26.6194063377926,11.5493829672886,10.1922095882658,14.2213340630666,14.7213907887626,15.9616715249312,18.704404465547,27.4041311325744,68.1006633992062,20.0396887737513,19.2568712710411,11.5696881758614,15.681853813412,19.8953885529462,25.5167494484479,24.379318717957,44.7422891599217,20.9669067533872,30.0767587662957,23.1326595424795,38.4264242121085,41.2143965164939,11.1835056730873,37.475942017478,40.8421078286237,23.5020490791904,43.3730750711431,26.9956228947033,43.203877204842,25.6141993382247,22.8750301409313,27.5183031127173,25.0307021076878,28.8958466783273,26.5968697036237,26.76980840618,28.8205399696395,29.1112311227618,19.2069296409593,28.1992086887875,27.8457747940186,30.5769798896519,30.6105620669094,29.8395539314716,32.9296655892427,29.85049682637,33.9200242906218,18.1092359517311,25.2214551731425,34.4173065905431,28.3281309903958,25.2075092291711,20.5754964426942,30.2979384874285,23.6649456869135,27.864797354589,12.6398373716382,32.1684883893394,24.438060948021,25.6835957944022,16.1822981386956,22.1476335597048,25.0949419720323,19.0861304794982,27.6138132068407,26.5088697015465,21.4618721119695,24.4039565547384,21.5573403386659,24.4609521477852,23.6720923873899,27.1931976611118,21.9550115291051,27.2439030083555,31.333202336055,28.0929591795446,23.7901523748335,16.3959351331397,21.9686898051291,27.6361639513922,26.0312271870629,27.2272758241512,25.1287189544703,20.1639163679313,26.0990983849481,17.6227881554692,20.6094871216221,17.7071260116624,23.5906545414135,33.2563181202062,24.2074615859658,21.9055400579804,7.58671603812327,25.3631697993598,20.2873924211545,17.3103628668517,17.8436288194216,23.2149563836954,23.5239918102237,23.0271830848179,17.7408562460754,17.5223972768957,22.8268522857105,26.3615267031429,22.4077254429051,27.4331777109522,18.2574109249653,25.8059560935086,24.1894559192349,26.7557407829254,25.1309601501305,18.6701760967895,33.0666875012915,18.9791883310937,19.3463357331028,17.4279425783507,20.2719077279761,16.4030797263545,27.1587189544909,21.9810037653762,32.2670653355211,21.8971160649993,23.4690248288502,31.4911763990614,26.4228441383475,30.8311163615322,20.1772984455924,23.2537924131214,23.7587605299656,28.6760800752541,34.5369963731791,32.6906872394216,16.5870412333199,13.5976420954677,20.1623351937805,24.8343071674259,22.4770825982909,27.7791697223522,13.4426655208874,25.752034574846,23.347608236803,21.8645696806118,19.1726823982191,23.1799734013975,23.6166594527338,24.6276581786284,16.5972387686707,21.6269334854371,19.3691011193797,33.0960955914461,21.8587731220734,11.3961986347043,29.3196526836437,26.2302495526331,18.5843193675948,18.2085477116236,16.3254720760966,21.8781892516842,10.0402643579463,21.213025208131,18.6068371081119,18.5402202033528,17.1118741624666,25.5989773928011,11.5960469432499,14.4389760547462,45.9593467767614,26.8291030106652,6.46793418913772,20.1476812929697,28.7291178500483,18.0152505778091,26.8214903581457,9.74287837166718,31.2113371724735,26.4790088579775,24.2581237860458,20.940554123568,21.4747687505554,25.5726801695381,24.7100752086493,18.0554989719567,26.8162369699463,30.0388989257026,28.0228244508478,17.9556575128004,29.4459298517842,35.0365330028725,34.5836396134194,41.6376275235871,40.6248447685314,38.3466979366823,37.0375929795856,16.2294005062569,27.2048954479776,33.54771207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| |||
|short_description=p1@Gpbp1 | |||
}} | |||
Revision as of 23:52, 12 September 2013
| Short description: | p1@Gpbp1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gpbp1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:298 |
| Association with transcript: | 137bp_to_ENSMUST00000091236_5end |
| EntrezGene: | Gpbp1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 2.15e-07 | 12 |
| lymphocyte | 9.18e-07 | 13 |
| common lymphoid progenitor | 9.18e-07 | 13 |
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 5.34e-07 | 43 |
| craniocervical region | 8.14e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
