FFCP PHASE1:Mm9::chr13:115879700..115879724,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=597|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:115879700..115879724,+|id=chr13:115879700..115879724,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,6.24e-08,25;CL:0000223,4.15e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.30e-18!130;UBERON:0000925!9.30e-18!130;UBERON:0006595!9.30e-18!130;UBERON:0000160!5.16e-17!43;UBERON:0001007!7.08e-17!128;UBERON:0001555!7.08e-17!128;UBERON:0007026!7.08e-17!128;UBERON:0004921!8.04e-16!126;UBERON:0004185!8.04e-16!126;UBERON:0005409!8.10e-16!59;UBERON:0002365!1.31e-12!25;UBERON:0002330!1.31e-12!25;UBERON:0005177!5.34e-12!85;UBERON:0009854!8.46e-12!23;UBERON:0009856!8.46e-12!23;UBERON:0002107!2.37e-11!22;UBERON:0007499!2.37e-11!22;UBERON:0006925!2.37e-11!22;UBERON:0009497!2.37e-11!22;UBERON:0000015!2.37e-11!22;UBERON:0002423!2.37e-11!22;UBERON:0006235!2.37e-11!22;UBERON:0008835!2.37e-11!22;UBERON:0003894!2.37e-11!22;UBERON:0004161!2.37e-11!22;UBERON:0008836!2.37e-11!22;UBERON:0002100!6.37e-11!98;UBERON:0005172!6.62e-11!49;UBERON:0005173!6.62e-11!49;UBERON:0002417!6.62e-11!49;UBERON:0000916!6.62e-11!49;UBERON:0009569!1.43e-09!66;UBERON:0002108!1.37e-08!16;UBERON:0000466!2.05e-08!79;UBERON:0005256!2.83e-08!47;UBERON:0000344!1.22e-07!15;UBERON:0004923!3.26e-07!24;UBERON:0003104!4.26e-07!131;UBERON:0009142!4.26e-07!131;UBERON:0001045!7.02e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.41e-16,25;UBERON:0002330,1.41e-16,25;UBERON:0009854,1.78e-15,23;UBERON:0009856,1.78e-15,23;UBERON:0000160,2.19e-15,31;UBERON:0002107,7.24e-15,22;UBERON:0007499,7.24e-15,22;UBERON:0006925,7.24e-15,22;UBERON:0009497,7.24e-15,22;UBERON:0000015,7.24e-15,22;UBERON:0002423,7.24e-15,22;UBERON:0006235,7.24e-15,22;UBERON:0008835,7.24e-15,22;UBERON:0003894,7.24e-15,22;UBERON:0004161,7.24e-15,22;UBERON:0008836,7.24e-15,22;UBERON:0004119,5.50e-13,118;UBERON:0000925,5.50e-13,118;UBERON:0006595,5.50e-13,118;UBERON:0005177,7.84e-13,79;UBERON:0001007,4.39e-12,116;UBERON:0001555,4.39e-12,116;UBERON:0007026,4.39e-12,116;UBERON:0004921,5.08e-11,114;UBERON:0002100,1.79e-10,90;UBERON:0005172,2.88e-10,49;UBERON:0005173,2.88e-10,49;UBERON:0002417,2.88e-10,49;UBERON:0000916,2.88e-10,49;UBERON:0005409,3.11e-10,47;UBERON:0000344,1.31e-09,15;UBERON:0005256,2.03e-08,45;UBERON:0001242,3.78e-08,13;UBERON:0001262,3.78e-08,13;UBERON:0004786,3.78e-08,13;UBERON:0009569,5.05e-08,66;UBERON:0003104,7.89e-08,61;UBERON:0009142,7.89e-08,61;UBERON:0001264,1.78e-07,12;UBERON:0004923,9.17e-07,24|phase1_expression=0.320297694209588,11.8651638597383,11.8299802241279,8.77146212789807,10.0179145989269,8.2260843236826,8.87728034262997,0,0.140788722151667,0,0.34243593645101,0.159544317990673,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.315462165358238,0.822686601634433,0,0.595303031057488,0,0,12.6394014006791,6.42345986988076,13.2073351746455,7.32295393470427,11.2045040996662,9.31114755336232,7.81293402255785,8.64748991555688,1.90509202037889,0,0,0.288851619751275,1.32987716286794,1.02084678131185,0,0.7813353445238,0.523523743973798,0,0,0,0.503587271902309,0.709638518536602,0.367093504323363,0,0,1.5378032791413,2.13872888981712,0.279972843250725,0,0,0,0,1.28629718017973,0,0.515672092277442,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.37863096666592,0.302286240427142,3.76823835312181,6.0229671388697,14.2793980078628,12.4131734076698,15.5946340187441,18.3691023709908,5.61777680527007,0.170430322578058,0,0,0.14084341977668,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,7.76450382089608,3.36619248741323,1.03909497345377,0.173485326766136,1.21786191324856,0.230615497256059,1.05505848386836,1.05829836422134,0.502666365318702,2.71914464507811,0.433798070759735,0,0,1.32504911076236,0.484875253135222,5.59175283654366,0,0,9.70736809792647,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0.407357455401265,1.36847667671102,4.54900965180614,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.0937017245597288,0,0.646703978798527,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,1.54408744268829,0,0.414251545071004,1.40715635988658,0.540186184383045,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.493679549740441,0.656669856316381,0.729619285912702,0.730999937126662,0.878200461164203,0.939444931322602,0.210289948564127,0,8.26046957459495,15.6025834331491,0.213288250535234,0,1.28867461322093,3.02525286935014,3.11329261382818,3.42406127002606,10.4396393539793,5.59976446061637,1.75934646160189,2.58643413653496,3.70431765526328,7.19055526923377,7.5648317456143,5.17767310461355,0.569003702859245,0.342745537829186,1.1270773567308,0.814605311381257,1.16371492300575,1.4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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=597 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:115879700..115879724,+ | |||
|id=chr13:115879700..115879724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.24e-08,25;CL:0000223,4.15e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.30e-18!130;UBERON:0000925!9.30e-18!130;UBERON:0006595!9.30e-18!130;UBERON:0000160!5.16e-17!43;UBERON:0001007!7.08e-17!128;UBERON:0001555!7.08e-17!128;UBERON:0007026!7.08e-17!128;UBERON:0004921!8.04e-16!126;UBERON:0004185!8.04e-16!126;UBERON:0005409!8.10e-16!59;UBERON:0002365!1.31e-12!25;UBERON:0002330!1.31e-12!25;UBERON:0005177!5.34e-12!85;UBERON:0009854!8.46e-12!23;UBERON:0009856!8.46e-12!23;UBERON:0002107!2.37e-11!22;UBERON:0007499!2.37e-11!22;UBERON:0006925!2.37e-11!22;UBERON:0009497!2.37e-11!22;UBERON:0000015!2.37e-11!22;UBERON:0002423!2.37e-11!22;UBERON:0006235!2.37e-11!22;UBERON:0008835!2.37e-11!22;UBERON:0003894!2.37e-11!22;UBERON:0004161!2.37e-11!22;UBERON:0008836!2.37e-11!22;UBERON:0002100!6.37e-11!98;UBERON:0005172!6.62e-11!49;UBERON:0005173!6.62e-11!49;UBERON:0002417!6.62e-11!49;UBERON:0000916!6.62e-11!49;UBERON:0009569!1.43e-09!66;UBERON:0002108!1.37e-08!16;UBERON:0000466!2.05e-08!79;UBERON:0005256!2.83e-08!47;UBERON:0000344!1.22e-07!15;UBERON:0004923!3.26e-07!24;UBERON:0003104!4.26e-07!131;UBERON:0009142!4.26e-07!131;UBERON:0001045!7.02e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.41e-16,25;UBERON:0002330,1.41e-16,25;UBERON:0009854,1.78e-15,23;UBERON:0009856,1.78e-15,23;UBERON:0000160,2.19e-15,31;UBERON:0002107,7.24e-15,22;UBERON:0007499,7.24e-15,22;UBERON:0006925,7.24e-15,22;UBERON:0009497,7.24e-15,22;UBERON:0000015,7.24e-15,22;UBERON:0002423,7.24e-15,22;UBERON:0006235,7.24e-15,22;UBERON:0008835,7.24e-15,22;UBERON:0003894,7.24e-15,22;UBERON:0004161,7.24e-15,22;UBERON:0008836,7.24e-15,22;UBERON:0004119,5.50e-13,118;UBERON:0000925,5.50e-13,118;UBERON:0006595,5.50e-13,118;UBERON:0005177,7.84e-13,79;UBERON:0001007,4.39e-12,116;UBERON:0001555,4.39e-12,116;UBERON:0007026,4.39e-12,116;UBERON:0004921,5.08e-11,114;UBERON:0002100,1.79e-10,90;UBERON:0005172,2.88e-10,49;UBERON:0005173,2.88e-10,49;UBERON:0002417,2.88e-10,49;UBERON:0000916,2.88e-10,49;UBERON:0005409,3.11e-10,47;UBERON:0000344,1.31e-09,15;UBERON:0005256,2.03e-08,45;UBERON:0001242,3.78e-08,13;UBERON:0001262,3.78e-08,13;UBERON:0004786,3.78e-08,13;UBERON:0009569,5.05e-08,66;UBERON:0003104,7.89e-08,61;UBERON:0009142,7.89e-08,61;UBERON:0001264,1.78e-07,12;UBERON:0004923,9.17e-07,24 | |||
|phase1_expression=0.320297694209588,11.8651638597383,11.8299802241279,8.77146212789807,10.0179145989269,8.2260843236826,8.87728034262997,0,0.140788722151667,0,0.34243593645101,0.159544317990673,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.315462165358238,0.822686601634433,0,0.595303031057488,0,0,12.6394014006791,6.42345986988076,13.2073351746455,7.32295393470427,11.2045040996662,9.31114755336232,7.81293402255785,8.64748991555688,1.90509202037889,0,0,0.288851619751275,1.32987716286794,1.02084678131185,0,0.7813353445238,0.523523743973798,0,0,0,0.503587271902309,0.709638518536602,0.367093504323363,0,0,1.5378032791413,2.13872888981712,0.279972843250725,0,0,0,0,1.28629718017973,0,0.515672092277442,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.37863096666592,0.302286240427142,3.76823835312181,6.0229671388697,14.2793980078628,12.4131734076698,15.5946340187441,18.3691023709908,5.61777680527007,0.170430322578058,0,0,0.14084341977668,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,7.76450382089608,3.36619248741323,1.03909497345377,0.173485326766136,1.21786191324856,0.230615497256059,1.05505848386836,1.05829836422134,0.502666365318702,2.71914464507811,0.433798070759735,0,0,1.32504911076236,0.484875253135222,5.59175283654366,0,0,9.70736809792647,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0.407357455401265,1.36847667671102,4.54900965180614,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.0937017245597288,0,0.646703978798527,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,1.54408744268829,0,0.414251545071004,1.40715635988658,0.540186184383045,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.493679549740441,0.656669856316381,0.729619285912702,0.730999937126662,0.878200461164203,0.939444931322602,0.210289948564127,0,8.26046957459495,15.6025834331491,0.213288250535234,0,1.28867461322093,3.02525286935014,3.11329261382818,3.42406127002606,10.4396393539793,5.59976446061637,1.75934646160189,2.58643413653496,3.70431765526328,7.19055526923377,7.5648317456143,5.17767310461355,0.569003702859245,0.342745537829186,1.1270773567308,0.814605311381257,1.16371492300575,1.40271639780637,1.20149420536089,2.06654207171443,4.86696056308262,3.45512058981041,16.008441862706,1.00107063429656,1.37591296579242,3.14806957338795,2.23146133527353,3.37648023653384,4.32863948028414,4.89083433666378,5.35046248357617,9.88421087477093,5.75072826109418,5.58211421502755,6.55279113540577,7.57736633841335,16.325164630494,6.75420929908714,2.58654466233247,0.189491411770485,0.488894929326078,0,0.469380496577004,0.502518772325447,0.238043640886014,0.390267295715598,0.472905432318573,0.44292937929755,0.159454768657487,1.14704320301017,1.20879487306127,1.01254341007058,0,0,10.3270497333998,4.69092468718045,0.160550589987792,0.468846746368813,0.163934945376675,0.252470927204373,0,0,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0,0,0.283880170416537,0,0.162886959353576,0.659880491890142,29.2039304347918,0.728341908464944,1.209294227859,8.48722858901541,7.67784921490009,6.7635732547664,3.35956781118687,2.90826983582004,4.63446591900138,11.6933600436252,17.9211634577498,13.4076206222643,1.36175842301515,0,0,0,0.354680467284547,0.535106452806212,0.658196082408484,0.608929898229199,6.57080782578389,2.75381692122966,4.6310963591542,0.8244312647074,0.645857706783622,0.422190474497091,0.119372344003136,0,7.28702091574627,0.370850604021019,0.854354403989263,0.412773735926445,0.925972636848558,0.753473828018764,0.136694227721025,0.457556346413045,0,0,0.138199973804424,1.90934123603023,0,0.813277868507395,0.648032044930808,0.627264888043406,1.09181281873089,0.809186078308924,2.14898984885873,2.09404753587224,1.8146096260851,1.86401793926078,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.506868376472335,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.948033361884535,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0,0.443068581523732,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0.665957860122194,1.25599399253266,0.671538465456314,0.772758376128762,4.129014459926,0.183151624267265,0.857473516316263,5.517293144389,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,1.45864030240976,1.04806581313991,1.65459157605013,1.11123363900808,0.206035057238894,1.60459604795908,2.02157769411038,2.02783439912192,0.377252682772152,1.21733959710847,1.15245274328765,1.26358031702349,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,1.32479028120958,0.342869252385415,0.532427418478012,0.476872379894642,1.30811774969096,1.41164070622996,0.846146078916765,1.82927972872773,0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| |||
|short_description=p@chr13:115879700..115879724,+ | |||
}} |
Revision as of 23:56, 12 September 2013
Short description: | p@chr13:115879700..115879724, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:115879700..115879724, + |
Coexpression cluster: | MCL_coexpression_mm9:597 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.24e-08 | 25 |
endodermal cell | 4.15e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.