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FFCP PHASE1:Mm9::chr13:12199105..12199121,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20191|HGNC=|MCL_coexpression_id=10|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6|association_with_transcript=90bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end|description=CAGE_peak_1_at_Ryr2_5end|id=chr13:12199105..12199121,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.53e-12!71;UBERON:0003075!4.53e-12!71;UBERON:0007284!4.53e-12!71;UBERON:0007100!2.88e-11!18;UBERON:0000948!2.88e-11!18;UBERON:0005498!2.88e-11!18;UBERON:0004140!2.88e-11!18;UBERON:0009881!2.88e-11!18;UBERON:0004141!2.88e-11!18;UBERON:0003084!2.88e-11!18;UBERON:0007005!2.88e-11!18;UBERON:0004139!2.88e-11!18;UBERON:0004291!2.88e-11!18;UBERON:0001017!8.96e-11!73;UBERON:0005743!8.96e-11!73;UBERON:0000025!1.51e-10!114;UBERON:0000073!6.14e-10!75;UBERON:0001016!6.14e-10!75;UBERON:0001049!8.92e-10!52;UBERON:0005068!8.92e-10!52;UBERON:0006241!8.92e-10!52;UBERON:0007135!8.92e-10!52;UBERON:0004121!1.12e-09!102;UBERON:0000924!1.12e-09!102;UBERON:0006601!1.12e-09!102;UBERON:0004111!2.43e-09!122;UBERON:0002020!2.58e-09!34;UBERON:0000955!4.43e-09!50;UBERON:0006238!4.43e-09!50;UBERON:0002616!1.28e-08!49;UBERON:0000033!1.51e-08!63;UBERON:0000468!2.04e-08!333;UBERON:0004535!3.80e-08!23;UBERON:0001009!3.80e-08!23;UBERON:0002021!3.46e-07!10;UBERON:0000411!3.46e-07!10;UBERON:0001950!3.46e-07!10;UBERON:0002791!3.62e-07!29;UBERON:0003528!3.62e-07!29;UBERON:0001893!3.62e-07!29;UBERON:0003056!5.99e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.08e-18,92;UBERON:0007100,1.07e-12,18;UBERON:0000948,1.07e-12,18;UBERON:0005498,1.07e-12,18;UBERON:0004140,1.07e-12,18;UBERON:0009881,1.07e-12,18;UBERON:0004141,1.07e-12,18;UBERON:0003084,1.07e-12,18;UBERON:0007005,1.07e-12,18;UBERON:0004139,1.07e-12,18;UBERON:0004291,1.07e-12,18;UBERON:0000025,2.46e-11,114;UBERON:0004111,1.20e-09,122;UBERON:0004535,3.61e-09,23;UBERON:0001009,3.61e-09,23;UBERON:0002346,5.00e-09,64;UBERON:0003075,5.00e-09,64;UBERON:0007284,5.00e-09,64;UBERON:0000073,8.37e-09,54;UBERON:0001017,1.02e-08,73;UBERON:0002021,3.50e-08,10;UBERON:0000411,3.50e-08,10;UBERON:0001950,3.50e-08,10;UBERON:0001016,4.75e-08,75;UBERON:0002020,5.72e-08,34;UBERON:0001049,7.31e-08,52;UBERON:0005068,7.31e-08,52;UBERON:0006241,7.31e-08,52;UBERON:0007135,7.31e-08,52|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.685572168028694,1.27316895539409,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,1.1665793944457,0.55994568650145,0,0.335565212115473,0,0,0.257259436035947,2.29226751951005,29.9089813520917,4.04632921719196,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.270011876663381,0.210324961351382,9.42648248532552,8.39300455616131,0.489963196859816,0.670918297127655,0.919218786610021,12.1127469099328,13.6625451751151,7.98753972932466,2.1101806036831,1.64677758484337,3.12548022334056,10.0505879640497,11.2552522006336,12.5294563176984,10.606629077052,11.2473627831291,5.21918448310842,0.151452386666368,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0.258937883647172,3.41416919849097,1.73485326766136,0.913396434936424,2.7673859670727,2.26083960828934,3.17489509266403,1.63366568728578,3.21353458054686,3.90418263683761,0,0.161766849947409,0.220841518460394,0,0,21.0802173848314,29.5319856606972,1.78819938646014,0,0,0,4.19413790333504,6.40500843946077,1.13088916901578,14.6012428961512,16.6215047264715,3.74018480207208,5.02947915510049,0.203678727700633,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.360124259610698,1.80845781402858,2.17716797284249,3.33095672740609,3.37326208415024,4.65666067330228,0.215567992932842,0,0.351902248327898,0,0.556094498451196,1.0447564995665,0.411564272815887,2.18937693500343,0,0,0,71.2512657522126,51.126681075879,44.8354533037927,70.5499312043926,90.7083108355532,97.0340140061609,134.637154010486,188.059654381133,267.392634020818,280.903663802311,257.5787511401,414.261616779323,408.190364891528,286.952000685403,395.103696830534,14.930586348053,0.92614151141356,0,0.793351699990633,0.853153002140936,1.62565670302307,2.44848176511977,1.81515172161008,1.77902435075896,1.71203063501303,2.37264530772256,2.30578536613615,2.76468729680296,1.39269530428806,2.53453313254856,2.69645822596266,2.37751854862164,1.1948476395262,0,0.571242563048644,1.1270773567308,2.44381593414377,0.193952487167626,0,1.83385957660346,0.442830443938806,0.784993639206874,0.246794327843601,0,1.50160595144485,0.196558995113203,0,0.202860121388503,0,0,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,3.14080423283228,6.253216588426,4.07412441105065,2.03694102930226,2.34690248288502,9.88286918906713,8.56957107189649,5.26860849216057,4.25614889086716,2.87904096543407,5.10255259703959,3.93271955317771,4.14443956478149,4.19482269886384,0,0,0,0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|EntrezGene=20191
|HGNC=
|MCL_coexpression_id=10
|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6
|association_with_transcript=90bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end
|description=CAGE_peak_1_at_Ryr2_5end
|id=chr13:12199105..12199121,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.53e-12!71;UBERON:0003075!4.53e-12!71;UBERON:0007284!4.53e-12!71;UBERON:0007100!2.88e-11!18;UBERON:0000948!2.88e-11!18;UBERON:0005498!2.88e-11!18;UBERON:0004140!2.88e-11!18;UBERON:0009881!2.88e-11!18;UBERON:0004141!2.88e-11!18;UBERON:0003084!2.88e-11!18;UBERON:0007005!2.88e-11!18;UBERON:0004139!2.88e-11!18;UBERON:0004291!2.88e-11!18;UBERON:0001017!8.96e-11!73;UBERON:0005743!8.96e-11!73;UBERON:0000025!1.51e-10!114;UBERON:0000073!6.14e-10!75;UBERON:0001016!6.14e-10!75;UBERON:0001049!8.92e-10!52;UBERON:0005068!8.92e-10!52;UBERON:0006241!8.92e-10!52;UBERON:0007135!8.92e-10!52;UBERON:0004121!1.12e-09!102;UBERON:0000924!1.12e-09!102;UBERON:0006601!1.12e-09!102;UBERON:0004111!2.43e-09!122;UBERON:0002020!2.58e-09!34;UBERON:0000955!4.43e-09!50;UBERON:0006238!4.43e-09!50;UBERON:0002616!1.28e-08!49;UBERON:0000033!1.51e-08!63;UBERON:0000468!2.04e-08!333;UBERON:0004535!3.80e-08!23;UBERON:0001009!3.80e-08!23;UBERON:0002021!3.46e-07!10;UBERON:0000411!3.46e-07!10;UBERON:0001950!3.46e-07!10;UBERON:0002791!3.62e-07!29;UBERON:0003528!3.62e-07!29;UBERON:0001893!3.62e-07!29;UBERON:0003056!5.99e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.08e-18,92;UBERON:0007100,1.07e-12,18;UBERON:0000948,1.07e-12,18;UBERON:0005498,1.07e-12,18;UBERON:0004140,1.07e-12,18;UBERON:0009881,1.07e-12,18;UBERON:0004141,1.07e-12,18;UBERON:0003084,1.07e-12,18;UBERON:0007005,1.07e-12,18;UBERON:0004139,1.07e-12,18;UBERON:0004291,1.07e-12,18;UBERON:0000025,2.46e-11,114;UBERON:0004111,1.20e-09,122;UBERON:0004535,3.61e-09,23;UBERON:0001009,3.61e-09,23;UBERON:0002346,5.00e-09,64;UBERON:0003075,5.00e-09,64;UBERON:0007284,5.00e-09,64;UBERON:0000073,8.37e-09,54;UBERON:0001017,1.02e-08,73;UBERON:0002021,3.50e-08,10;UBERON:0000411,3.50e-08,10;UBERON:0001950,3.50e-08,10;UBERON:0001016,4.75e-08,75;UBERON:0002020,5.72e-08,34;UBERON:0001049,7.31e-08,52;UBERON:0005068,7.31e-08,52;UBERON:0006241,7.31e-08,52;UBERON:0007135,7.31e-08,52
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.685572168028694,1.27316895539409,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,1.1665793944457,0.55994568650145,0,0.335565212115473,0,0,0.257259436035947,2.29226751951005,29.9089813520917,4.04632921719196,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.270011876663381,0.210324961351382,9.42648248532552,8.39300455616131,0.489963196859816,0.670918297127655,0.919218786610021,12.1127469099328,13.6625451751151,7.98753972932466,2.1101806036831,1.64677758484337,3.12548022334056,10.0505879640497,11.2552522006336,12.5294563176984,10.606629077052,11.2473627831291,5.21918448310842,0.151452386666368,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0,0,0,0.79928715803342,0.258937883647172,3.41416919849097,1.73485326766136,0.913396434936424,2.7673859670727,2.26083960828934,3.17489509266403,1.63366568728578,3.21353458054686,3.90418263683761,0,0.161766849947409,0.220841518460394,0,0,21.0802173848314,29.5319856606972,1.78819938646014,0,0,0,4.19413790333504,6.40500843946077,1.13088916901578,14.6012428961512,16.6215047264715,3.74018480207208,5.02947915510049,0.203678727700633,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.360124259610698,1.80845781402858,2.17716797284249,3.33095672740609,3.37326208415024,4.65666067330228,0.215567992932842,0,0.351902248327898,0,0.556094498451196,1.0447564995665,0.411564272815887,2.18937693500343,0,0,0,71.2512657522126,51.126681075879,44.8354533037927,70.5499312043926,90.7083108355532,97.0340140061609,134.637154010486,188.059654381133,267.392634020818,280.903663802311,257.5787511401,414.261616779323,408.190364891528,286.952000685403,395.103696830534,14.930586348053,0.92614151141356,0,0.793351699990633,0.853153002140936,1.62565670302307,2.44848176511977,1.81515172161008,1.77902435075896,1.71203063501303,2.37264530772256,2.30578536613615,2.76468729680296,1.39269530428806,2.53453313254856,2.69645822596266,2.37751854862164,1.1948476395262,0,0.571242563048644,1.1270773567308,2.44381593414377,0.193952487167626,0,1.83385957660346,0.442830443938806,0.784993639206874,0.246794327843601,0,1.50160595144485,0.196558995113203,0,0.202860121388503,0,0,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,3.14080423283228,6.253216588426,4.07412441105065,2.03694102930226,2.34690248288502,9.88286918906713,8.56957107189649,5.26860849216057,4.25614889086716,2.87904096543407,5.10255259703959,3.93271955317771,4.14443956478149,4.19482269886384,0,0,0,0,6.74312477948726,7.03270119553219,0,0.252470927204373,3.15508219416257,6.63745865304285,6.24727853425117,1.43381278771531,0.668396022247182,2.83076530788832,0.404810701674894,0,0.395287777946524,17.3513510867776,3.40656204499845,1.78065603667255,3.58351310577867,0.164970122972535,0,0.242780636154981,0,0,0,0.614870295887855,1.29214146584111,0.727067458955011,1.06949213515416,1.58018378967908,0,1.03135543248187,1.70219802876894,0.36012218806262,0,0.428674070063185,0.886701168211368,1.60531935841864,0.329098041204242,0.913394847343798,0.704015124191131,0.63549621259146,0,0.98931751764888,0.807322133479528,0.844380948994182,0.238744688006273,0.492422699235184,1.45740418314925,6.48988557036784,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,2.21435195506795,0.203319467126849,2.05210147561422,2.09088296014469,0.87345025498471,3.2367443132357,3.2234847732881,1.04702376793612,2.46268449254406,0,0,0.149516546043979,0.496375471371293,0,0.516639293910924,0,0.352071715937262,0.781226309063701,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0.405450430580328,0.718976700153791,0.909445760844565,0.358053391334963,1.98681354781265,0.721172697119813,1.47689527174577,0.706765149637033,0.381034033274999,0.907435666231565,0.0974578807397524,0,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,1.35232715822533,0,0.915758121336325,0.214368379079066,0.501572104035363,25.9785847603851,18.8733346967943,21.1971339972577,20.6223818812425,22.6077231524312,23.4172108190807,23.6257875081132,17.1122057225204,25.8291173120997,15.5328093525546,0.518936737920883,0.399024873401031,1.19513524027894,1.45864030240976,0,1.47074806760011,4.00044110042907,3.7086310303001,4.1719497246936,2.52697211763797,2.78827229879264,4.33840585187975,3.55837728385553,3.45735822986294,4.19278923375977,4.28664322154766,3.47652977834566,4.24400285020151,4.53294490883637,4.26876868389752,1.37147700954166,2.30718548007139,3.57654284920981,1.74415699958794,4.51725025993587,2.36920902096694,2.92684756596436,4.20911538300549,3.66671107383827,2.24456908663095,3.08451047122853,4.23569274214923,3.6830793885272,3.40861050609125,3.66522560864169,1.74867404556562,3.04111090979031,5.15690529715916,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p1@Ryr2
}}

Revision as of 00:00, 13 September 2013

Short description:p1@Ryr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ryr2_5end
Coexpression cluster:MCL_coexpression_mm9:10
Association with transcript: 90bp_to_ENSMUST00000021750, ENSMUST00000170156, NM_023868, uc007pld.1, uc007plf.1, uc011ywc.1_5end
EntrezGene:Ryr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ryr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.08
cerebellum, neonate N30.CNhs11135.1395-42I229.53
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E971.25
heart, embryo E12.CNhs11015.353-12F551.13
heart, embryo E13.CNhs11013.376-3I944.84
heart, embryo E14.CNhs10597.403-26D470.55
heart, embryo E15.CNhs11017.431-16C890.71
heart, embryo E16.CNhs11021.457-17C697.03
heart, embryo E17.CNhs11025.479-18E5134.64
heart, embryo E18.CNhs11030.1283-20G3188.06
heart, neonate N00.CNhs11213.639-21E3267.39
heart, neonate N03.CNhs11221.1349-25I2280.90
heart, neonate N10.CNhs11118.749-24G1257.58
heart, neonate N16.CNhs11209.782-15G1414.26
heart, neonate N20.CNhs11127.821-26I6408.19
heart, neonate N25.CNhs11196.1351-25D3286.95
heart, neonate N30.CNhs11202.1390-42D2395.10
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.08e-1892
primary circulatory organ1.07e-1218
heart1.07e-1218
primitive heart tube1.07e-1218
primary heart field1.07e-1218
anterior lateral plate mesoderm1.07e-1218
heart tube1.07e-1218
heart primordium1.07e-1218
cardiac mesoderm1.07e-1218
cardiogenic plate1.07e-1218
heart rudiment1.07e-1218
tube2.46e-11114
anatomical conduit1.20e-09122
cardiovascular system3.61e-0923
circulatory system3.61e-0923
neurectoderm5.00e-0964
neural plate5.00e-0964
presumptive neural plate5.00e-0964
regional part of nervous system8.37e-0954
central nervous system1.02e-0873
occipital lobe3.50e-0810
visual cortex3.50e-0810
neocortex3.50e-0810
nervous system4.75e-0875
gray matter5.72e-0834
neural tube7.31e-0852
neural rod7.31e-0852
future spinal cord7.31e-0852
neural keel7.31e-0852







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