FFCP PHASE1:Mm9::chr13:24419284..24419330,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12763|HGNC=|MCL_coexpression_id=8|UniProt=Q61419|association_with_transcript=0bp_to_ENSMUST00000167746,NM_001111110,uc007pvq.2,uc011yxl.1_5end|description=CAGE_peak_2_at_Cmah_5end|id=chr13:24419284..24419330,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.80e-23!49;UBERON:0005173!2.80e-23!49;UBERON:0002417!2.80e-23!49;UBERON:0000916!2.80e-23!49;UBERON:0002107!2.28e-20!22;UBERON:0007499!2.28e-20!22;UBERON:0006925!2.28e-20!22;UBERON:0009497!2.28e-20!22;UBERON:0000015!2.28e-20!22;UBERON:0002423!2.28e-20!22;UBERON:0006235!2.28e-20!22;UBERON:0008835!2.28e-20!22;UBERON:0003894!2.28e-20!22;UBERON:0004161!2.28e-20!22;UBERON:0008836!2.28e-20!22;UBERON:0009854!4.00e-19!23;UBERON:0009856!4.00e-19!23;UBERON:0002365!6.05e-17!25;UBERON:0002330!6.05e-17!25;UBERON:0009569!8.20e-15!66;UBERON:0005256!9.44e-12!47;UBERON:0005177!1.28e-10!85;UBERON:0006554!5.27e-09!16;UBERON:0002113!2.55e-08!14;UBERON:0003918!2.55e-08!14;UBERON:0005095!2.55e-08!14;UBERON:0007687!2.55e-08!14;UBERON:0001008!3.07e-08!17;UBERON:0002100!4.42e-08!98;UBERON:0003914!1.53e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-24,22;UBERON:0007499,1.05e-24,22;UBERON:0006925,1.05e-24,22;UBERON:0009497,1.05e-24,22;UBERON:0000015,1.05e-24,22;UBERON:0002423,1.05e-24,22;UBERON:0006235,1.05e-24,22;UBERON:0008835,1.05e-24,22;UBERON:0003894,1.05e-24,22;UBERON:0004161,1.05e-24,22;UBERON:0008836,1.05e-24,22;UBERON:0009854,2.27e-23,23;UBERON:0009856,2.27e-23,23;UBERON:0005172,3.06e-23,49;UBERON:0005173,3.06e-23,49;UBERON:0002417,3.06e-23,49;UBERON:0000916,3.06e-23,49;UBERON:0002365,5.08e-21,25;UBERON:0002330,5.08e-21,25;UBERON:0003104,6.45e-17,61;UBERON:0009142,6.45e-17,61;UBERON:0009569,5.64e-15,66;UBERON:0005256,2.05e-12,45;UBERON:0005177,4.08e-11,79;UBERON:0002100,9.21e-09,90;UBERON:0003914,1.49e-08,47;UBERON:0002368,8.54e-08,60;UBERON:0002530,9.30e-07,65|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,71.4151817894551,25.8389106808945,163.530067066259,216.375547010074,209.676583161553,40.0266597375493,0,0,0,0,0,0,0,0,0,0,58.1195947770015,0,1.33597925158342,0,0,0,1.05505848386836,0.352766121407114,1.50799909595611,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0.452114453507145,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0.379335801906163,0.685491075658373,2.25415471346161,1.62921062276251,3.68509725618489,3.43665517462561,12.3943612763544,28.0459281161244,26.375786277351,19.8669433914099,119.173956089034,0,1.17935397067922,0.224862112384854,1.82574109249653,2.65294875727659,4.58326533206556,21.5772103088108,4.53978634970099,49.4210543738547,67.5710570678566,79.6381628010597,107.652997224523,98.2531835214265,190.520053160271,102.278026529034,0,0,0,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.218362563746178,1.61837215661785,6.77758336947755,0.26175594198403,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,1.23621034343337,1.60459604795908,1.51618327058278,2.78827229879264,1.13175804831646,2.34103768674706,1.98477972455095,1.66562859971278,2.38146845641537,1.50649623728312,2.12200142510076,2.88460130562315,1.76638704161277,1.37147700954166,1.95223386775271,0.476872379894642,1.30811774969096,1.50575008664529,1.35383372626682,1.28049581010941,1.31534855718921,1.62964936615034,0,1.06771516311757,1.57607171800902,1.22769312950907,1.23949472948773,0.771626443924566,0,1.87145286756327,1.28922632428979,0,0.441182838239031,0|short_description=p2@Cmah}} | ||
|EntrezGene=12763 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q61419 | |||
|association_with_transcript=0bp_to_ENSMUST00000167746,NM_001111110,uc007pvq.2,uc011yxl.1_5end | |||
|description=CAGE_peak_2_at_Cmah_5end | |||
|id=chr13:24419284..24419330,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.80e-23!49;UBERON:0005173!2.80e-23!49;UBERON:0002417!2.80e-23!49;UBERON:0000916!2.80e-23!49;UBERON:0002107!2.28e-20!22;UBERON:0007499!2.28e-20!22;UBERON:0006925!2.28e-20!22;UBERON:0009497!2.28e-20!22;UBERON:0000015!2.28e-20!22;UBERON:0002423!2.28e-20!22;UBERON:0006235!2.28e-20!22;UBERON:0008835!2.28e-20!22;UBERON:0003894!2.28e-20!22;UBERON:0004161!2.28e-20!22;UBERON:0008836!2.28e-20!22;UBERON:0009854!4.00e-19!23;UBERON:0009856!4.00e-19!23;UBERON:0002365!6.05e-17!25;UBERON:0002330!6.05e-17!25;UBERON:0009569!8.20e-15!66;UBERON:0005256!9.44e-12!47;UBERON:0005177!1.28e-10!85;UBERON:0006554!5.27e-09!16;UBERON:0002113!2.55e-08!14;UBERON:0003918!2.55e-08!14;UBERON:0005095!2.55e-08!14;UBERON:0007687!2.55e-08!14;UBERON:0001008!3.07e-08!17;UBERON:0002100!4.42e-08!98;UBERON:0003914!1.53e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-24,22;UBERON:0007499,1.05e-24,22;UBERON:0006925,1.05e-24,22;UBERON:0009497,1.05e-24,22;UBERON:0000015,1.05e-24,22;UBERON:0002423,1.05e-24,22;UBERON:0006235,1.05e-24,22;UBERON:0008835,1.05e-24,22;UBERON:0003894,1.05e-24,22;UBERON:0004161,1.05e-24,22;UBERON:0008836,1.05e-24,22;UBERON:0009854,2.27e-23,23;UBERON:0009856,2.27e-23,23;UBERON:0005172,3.06e-23,49;UBERON:0005173,3.06e-23,49;UBERON:0002417,3.06e-23,49;UBERON:0000916,3.06e-23,49;UBERON:0002365,5.08e-21,25;UBERON:0002330,5.08e-21,25;UBERON:0003104,6.45e-17,61;UBERON:0009142,6.45e-17,61;UBERON:0009569,5.64e-15,66;UBERON:0005256,2.05e-12,45;UBERON:0005177,4.08e-11,79;UBERON:0002100,9.21e-09,90;UBERON:0003914,1.49e-08,47;UBERON:0002368,8.54e-08,60;UBERON:0002530,9.30e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,71.4151817894551,25.8389106808945,163.530067066259,216.375547010074,209.676583161553,40.0266597375493,0,0,0,0,0,0,0,0,0,0,58.1195947770015,0,1.33597925158342,0,0,0,1.05505848386836,0.352766121407114,1.50799909595611,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0.452114453507145,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0.379335801906163,0.685491075658373,2.25415471346161,1.62921062276251,3.68509725618489,3.43665517462561,12.3943612763544,28.0459281161244,26.375786277351,19.8669433914099,119.173956089034,0,1.17935397067922,0.224862112384854,1.82574109249653,2.65294875727659,4.58326533206556,21.5772103088108,4.53978634970099,49.4210543738547,67.5710570678566,79.6381628010597,107.652997224523,98.2531835214265,190.520053160271,102.278026529034,0,0,0,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.218362563746178,1.61837215661785,6.77758336947755,0.26175594198403,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,1.23621034343337,1.60459604795908,1.51618327058278,2.78827229879264,1.13175804831646,2.34103768674706,1.98477972455095,1.66562859971278,2.38146845641537,1.50649623728312,2.12200142510076,2.88460130562315,1.76638704161277,1.37147700954166,1.95223386775271,0.476872379894642,1.30811774969096,1.50575008664529,1.35383372626682,1.28049581010941,1.31534855718921,1.62964936615034,0,1.06771516311757,1.57607171800902,1.22769312950907,1.23949472948773,0.771626443924566,0,1.87145286756327,1.28922632428979,0,0.441182838239031,0 | |||
|short_description=p2@Cmah | |||
}} |
Revision as of 00:12, 13 September 2013
Short description: | p2@Cmah |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cmah_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000167746, NM_001111110, uc007pvq.2, uc011yxl.1_5end |
EntrezGene: | Cmah |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.05e-24 | 22 |
epithelial sac | 1.05e-24 | 22 |
digestive gland | 1.05e-24 | 22 |
epithelium of foregut-midgut junction | 1.05e-24 | 22 |
anatomical boundary | 1.05e-24 | 22 |
hepatobiliary system | 1.05e-24 | 22 |
foregut-midgut junction | 1.05e-24 | 22 |
hepatic diverticulum | 1.05e-24 | 22 |
liver primordium | 1.05e-24 | 22 |
septum transversum | 1.05e-24 | 22 |
liver bud | 1.05e-24 | 22 |
digestive tract diverticulum | 2.27e-23 | 23 |
sac | 2.27e-23 | 23 |
abdomen element | 3.06e-23 | 49 |
abdominal segment element | 3.06e-23 | 49 |
abdominal segment of trunk | 3.06e-23 | 49 |
abdomen | 3.06e-23 | 49 |
exocrine gland | 5.08e-21 | 25 |
exocrine system | 5.08e-21 | 25 |
mesenchyme | 6.45e-17 | 61 |
entire embryonic mesenchyme | 6.45e-17 | 61 |
subdivision of trunk | 5.64e-15 | 66 |
trunk mesenchyme | 2.05e-12 | 45 |
trunk region element | 4.08e-11 | 79 |
trunk | 9.21e-09 | 90 |
epithelial tube | 1.49e-08 | 47 |
endocrine gland | 8.54e-08 | 60 |
gland | 9.30e-07 | 65 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.