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FFCP PHASE1:Mm9::chr13:29045559..29045574,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20677|HGNC=|MCL_coexpression_id=667|UniProt=Q06831|association_with_transcript=7bp_to_ENSMUST00000067230_5end|description=CAGE_peak_1_at_Sox4_5end|id=chr13:29045559..29045574,-|ontology_enrichment_celltype=CL:0000393!3.25e-08!39;CL:0000211!3.25e-08!39;CL:0000221!6.77e-08!44;CL:0000133!6.77e-08!44;CL:0000540!7.57e-08!33;CL:0000047!7.57e-08!33;CL:0000031!7.57e-08!33;CL:0000404!7.57e-08!33;CL:0002319!1.02e-07!43;CL:0000055!1.45e-07!50|ontology_enrichment_celltype_v019_2=CL:0000393,3.25e-08,39;CL:0000211,3.25e-08,39;CL:0000221,6.77e-08,44;CL:0000133,6.77e-08,44;CL:0000540,7.57e-08,33;CL:0000047,7.57e-08,33;CL:0000031,7.57e-08,33;CL:0000404,7.57e-08,33;CL:0002319,1.02e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=115.787616456766,11.5161884520989,7.27998783023258,3.32710632437513,5.50985302940982,81.5893261491784,74.0552070687816,17.6898953114959,94.4692325637684,100.647746318457,4.96532107853964,6.54131703761759,19.174481752295,17.0469784717045,4.66353666541928,5.26435695213547,0,9.46386496074713,10.4206969540361,6.36584477697045,26.9587229778891,137.815840266829,132.167093304301,36.6382648196901,24.7762023552544,12.0588712464154,17.6612418425221,39.2157643488318,12.7315691035771,15.3738379153558,30.598810470432,0,0,15.8481681015439,69.3243887403059,58.1821258754723,70.0300891979926,0.418531630736908,0,0,0.588231488031014,0,1.45653105909346,174.744783350101,172.138029210736,412.61309885946,93.1045699774167,107.704427251941,29.8773208518882,20.9984291000226,50.8150710500066,56.0635001023389,6.71130424230945,29.0144856804538,15.1242209614109,66.8874533693462,57.5932214276901,48.4731766740796,595.012711388077,839.508684104716,677.565770348106,85.3888220814213,54.2469825627795,13.0485459005803,19.7773272513395,10.6572017241915,165.379261006159,172.129800784056,869.748468043511,983.653266684698,972.752946250142,79.6966246486612,96.7404209368067,903.124662611856,868.359967425221,1188.54989108676,12.1127469099328,9.44886301830389,10.2916377281683,734.73850894491,609.948119897265,639.681619043701,10.3297709630511,14.6318278608237,15.279824777681,128.458063266519,119.307468509648,330.113418556607,186.362161792966,180.767171775431,86.0897531443983,8.60423876981386,3.39985666853875,2.15881276655127,2.59910566979068,0,21.3475518600263,59.139321934586,27.5373164879041,46.6408238353649,133.801248787846,56.4636500622998,53.5091003383956,0,148.729345174704,166.710791482615,190.582715770573,15.0722721229159,8.2860122767095,31.321291342678,94.3760177607779,72.1583183599775,58.5763363030389,52.30075627176,71.0235791099657,43.8576403740567,15.0788930317968,10.9895511259133,22.1152637987469,76.5157200251245,67.5775046488804,68.3674106920663,13.0474232852686,3.80615036115011,6.70229461803056,23.5020490791904,91.7783853715349,53.3913430584133,89.9657207677298,11.3840885947665,15.0975198930147,642.093739296737,9.90798625095976,24.2929684463814,12.0517065844545,25.7963608277735,163.757697071309,68.9214617179915,32.8539585963777,7.57590681191306,148.077064091557,181.852564606877,202.209771771407,194.409215008072,335.419940816046,337.323425510009,344.072732583324,25.0942269616845,201.340505399275,227.872826602222,198.472868056934,158.697710277564,136.243152120543,96.8141022931623,92.6019613835746,173.557880665726,34.4084461783485,25.9921386185862,34.0996199274711,133.596123285399,147.751417788091,134.146235788456,182.766935871782,148.55699496929,123.56795742279,119.057379712209,150.501378185186,191.845457509259,226.763473180776,145.288205709999,94.0398190731926,57.4565950581556,88.0395962317113,68.7136864053103,9.88362758251398,433.331322729167,5.61711931072457,21.6849464664106,187.0537957194,161.868960286726,93.944379303806,55.8663363206659,57.5959133558214,54.2143034420794,36.5387377389274,39.3630501790386,54.5397403096585,60.4827675005099,58.8791543099743,40.44687338944,30.0431889325825,34.6505815462599,154.958675078668,116.876228399753,125.105586597119,102.436617906193,96.9762435838129,112.2874476444,154.739806343058,33.8027238873289,43.0176514285367,27.5175675545615,3.55743152504579,21.6898637430922,24.9629923793768,12.5922782935518,13.9973483758067,16.6412240229168,22.9163266603278,14.0971107350897,14.5921704097532,11.8061407670875,38.8174157623857,36.8419538191818,27.7713529071959,10.3557339958316,8.7904732625737,8.68398338454061,38.4286635546538,185.133109299764,184.476353332373,147.508479538638,115.232911909655,103.518867099042,89.7424526140272,124.10500003756,264.669406954295,259.778080958013,332.463192650861,96.6793556822854,123.642447015981,71.8905821150113,1.50791283939272,2.17562273527484,29.0140921081231,40.0108282141862,7.38532713943843,14.1826140776566,156.557872834725,33.3261623909772,164.695290535286,166.326905070368,255.707573108832,217.461606136822,272.70557707685,203.815102167959,187.832165577151,260.399969398979,249.821875662203,91.576575180215,186.793152134082,165.066814599546,165.0044898251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|EntrezGene=20677
|HGNC=
|MCL_coexpression_id=667
|UniProt=Q06831
|association_with_transcript=7bp_to_ENSMUST00000067230_5end
|description=CAGE_peak_1_at_Sox4_5end
|id=chr13:29045559..29045574,-
|ontology_enrichment_celltype=CL:0000393!3.25e-08!39;CL:0000211!3.25e-08!39;CL:0000221!6.77e-08!44;CL:0000133!6.77e-08!44;CL:0000540!7.57e-08!33;CL:0000047!7.57e-08!33;CL:0000031!7.57e-08!33;CL:0000404!7.57e-08!33;CL:0002319!1.02e-07!43;CL:0000055!1.45e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000393,3.25e-08,39;CL:0000211,3.25e-08,39;CL:0000221,6.77e-08,44;CL:0000133,6.77e-08,44;CL:0000540,7.57e-08,33;CL:0000047,7.57e-08,33;CL:0000031,7.57e-08,33;CL:0000404,7.57e-08,33;CL:0002319,1.02e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=115.787616456766,11.5161884520989,7.27998783023258,3.32710632437513,5.50985302940982,81.5893261491784,74.0552070687816,17.6898953114959,94.4692325637684,100.647746318457,4.96532107853964,6.54131703761759,19.174481752295,17.0469784717045,4.66353666541928,5.26435695213547,0,9.46386496074713,10.4206969540361,6.36584477697045,26.9587229778891,137.815840266829,132.167093304301,36.6382648196901,24.7762023552544,12.0588712464154,17.6612418425221,39.2157643488318,12.7315691035771,15.3738379153558,30.598810470432,0,0,15.8481681015439,69.3243887403059,58.1821258754723,70.0300891979926,0.418531630736908,0,0,0.588231488031014,0,1.45653105909346,174.744783350101,172.138029210736,412.61309885946,93.1045699774167,107.704427251941,29.8773208518882,20.9984291000226,50.8150710500066,56.0635001023389,6.71130424230945,29.0144856804538,15.1242209614109,66.8874533693462,57.5932214276901,48.4731766740796,595.012711388077,839.508684104716,677.565770348106,85.3888220814213,54.2469825627795,13.0485459005803,19.7773272513395,10.6572017241915,165.379261006159,172.129800784056,869.748468043511,983.653266684698,972.752946250142,79.6966246486612,96.7404209368067,903.124662611856,868.359967425221,1188.54989108676,12.1127469099328,9.44886301830389,10.2916377281683,734.73850894491,609.948119897265,639.681619043701,10.3297709630511,14.6318278608237,15.279824777681,128.458063266519,119.307468509648,330.113418556607,186.362161792966,180.767171775431,86.0897531443983,8.60423876981386,3.39985666853875,2.15881276655127,2.59910566979068,0,21.3475518600263,59.139321934586,27.5373164879041,46.6408238353649,133.801248787846,56.4636500622998,53.5091003383956,0,148.729345174704,166.710791482615,190.582715770573,15.0722721229159,8.2860122767095,31.321291342678,94.3760177607779,72.1583183599775,58.5763363030389,52.30075627176,71.0235791099657,43.8576403740567,15.0788930317968,10.9895511259133,22.1152637987469,76.5157200251245,67.5775046488804,68.3674106920663,13.0474232852686,3.80615036115011,6.70229461803056,23.5020490791904,91.7783853715349,53.3913430584133,89.9657207677298,11.3840885947665,15.0975198930147,642.093739296737,9.90798625095976,24.2929684463814,12.0517065844545,25.7963608277735,163.757697071309,68.9214617179915,32.8539585963777,7.57590681191306,148.077064091557,181.852564606877,202.209771771407,194.409215008072,335.419940816046,337.323425510009,344.072732583324,25.0942269616845,201.340505399275,227.872826602222,198.472868056934,158.697710277564,136.243152120543,96.8141022931623,92.6019613835746,173.557880665726,34.4084461783485,25.9921386185862,34.0996199274711,133.596123285399,147.751417788091,134.146235788456,182.766935871782,148.55699496929,123.56795742279,119.057379712209,150.501378185186,191.845457509259,226.763473180776,145.288205709999,94.0398190731926,57.4565950581556,88.0395962317113,68.7136864053103,9.88362758251398,433.331322729167,5.61711931072457,21.6849464664106,187.0537957194,161.868960286726,93.944379303806,55.8663363206659,57.5959133558214,54.2143034420794,36.5387377389274,39.3630501790386,54.5397403096585,60.4827675005099,58.8791543099743,40.44687338944,30.0431889325825,34.6505815462599,154.958675078668,116.876228399753,125.105586597119,102.436617906193,96.9762435838129,112.2874476444,154.739806343058,33.8027238873289,43.0176514285367,27.5175675545615,3.55743152504579,21.6898637430922,24.9629923793768,12.5922782935518,13.9973483758067,16.6412240229168,22.9163266603278,14.0971107350897,14.5921704097532,11.8061407670875,38.8174157623857,36.8419538191818,27.7713529071959,10.3557339958316,8.7904732625737,8.68398338454061,38.4286635546538,185.133109299764,184.476353332373,147.508479538638,115.232911909655,103.518867099042,89.7424526140272,124.10500003756,264.669406954295,259.778080958013,332.463192650861,96.6793556822854,123.642447015981,71.8905821150113,1.50791283939272,2.17562273527484,29.0140921081231,40.0108282141862,7.38532713943843,14.1826140776566,156.557872834725,33.3261623909772,164.695290535286,166.326905070368,255.707573108832,217.461606136822,272.70557707685,203.815102167959,187.832165577151,260.399969398979,249.821875662203,91.576575180215,186.793152134082,165.066814599546,165.004489825173,219.740203799417,9.2921596837974,169.218103400022,110.045774735169,64.691542356273,67.624133469697,71.3249543229912,63.5733601193824,111.604854949594,109.444695164109,33.4998963411965,20.0295356292498,27.8465966770104,62.3004478529432,197.166897964285,189.639830425518,171.255290990242,173.261408268501,166.418106822732,122.095373286774,72.7671228383892,23.9365142224985,27.114505070569,18.7449138346718,15.1695352706162,90.0971500963153,77.1402309831113,78.6663746980669,77.9669273789041,38.4754704351403,10.7546675166096,4.44264290074417,133.119529836279,45.7430482603188,19.9670564424972,12.4391747226133,13.7266903923914,131.563304815244,142.470578465484,128.940575559527,24.821436068393,185.372892238545,137.44395977775,83.9201498185396,81.3353471496283,72.0596460362386,57.4522115599336,90.5055340192428,44.7602660792691,24.8860748720242,44.1150912291717,14.6560164057889,163.122551733981,164.796656495269,159.255523253775,133.292937829018,113.876428580784,142.706402193237,127.730501531915,67.2148397768807,22.4673232368186,22.1783104818556,218.363684354071,145.151254147758,126.231766355573,130.570427092684,134.807101837614,187.356517558733,159.619556962519,179.590465044286,179.31641510791,172.83703749354,168.17807680825,192.86914598397,195.117614846588,211.780946753003,23.579959895982,22.8645531975287,3.22969883794113,10.2409615982088,47.3314505378867,46.357571436442,185.898898631274,138.910709643235,19.5613120573792,57.0399361043237,39.12764510311,48.6961186423487,29.730600545458,14.3867329151835,21.1510291269116,27.0009000092722,16.2115633160719,10.8754178156209,21.7459330935764,219.095090750197,263.356416444681,221.78295387462,126.658599592581,171.46356702969,103.687738765808,90.0099247596542,100.957178047058,102.694147069381,101.83697634081,95.0547374588399,87.3339960617533,82.7790926033761,81.8241447734229,82.0752851375714,101.926849934578,97.2269494677337,87.5807860905221,98.4885302919903,108.191206298782,88.8031363678226,82.8812014764106,83.214230291615,100.143681059674,93.5447241328386,87.0684315205351,93.8420500837323,89.9698413117423,99.6802195628625,109.422742973259,90.2812487924965,96.7314016928033,82.6646707202772,88.6238731583725,105.519916206684,261.052053945153,116.030077788923,121.18727448324,53.1781563151385,70.3686626991255,74.6614430697757
|short_description=p1@Sox4
}}

Revision as of 00:18, 13 September 2013

Short description:p1@Sox4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sox4_5end
Coexpression cluster:MCL_coexpression_mm9:667
Association with transcript: 7bp_to_ENSMUST00000067230_5end
EntrezGene:Sox4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sox4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7115.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I781.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I874.06
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E794.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2100.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.42
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2137.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9132.17
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.78
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I239.22
Ileum epithelium, pool1.CNhs13199.10252-104B912.73
Ileum epithelium, pool2.CNhs13232.10253-104C115.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C830.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F569.32
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F658.18
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F770.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8174.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9172.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3412.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B793.10
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2107.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C450.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C456.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C166.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E157.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C548.47
Mouse Granule cells, donor1.CNhs12131.11713-123C3595.01
Mouse Granule cells, donor2.CNhs12357.11731-123E3839.51
Mouse Granule cells, donor3.CNhs12108.11636-122C7677.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C685.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D154.25
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C8165.38
Mouse Microglia, donor2.CNhs12634.11736-123E8172.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5869.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5983.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9972.75
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F179.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D596.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2903.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2868.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61188.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4734.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4609.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8639.68
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6128.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6119.31
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1330.11
Mouse Schwann, donor1.CNhs12507.11728-123D9186.36
Mouse Schwann, donor2.CNhs12573.11746-123F9180.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G386.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I759.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I846.64
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6133.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H156.46
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1148.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2166.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3190.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.07
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D731.32
adrenal gland, embryo E14.CNhs11038.406-44C594.38
adrenal gland, embryo E16.CNhs11004.1254-43D672.16
adrenal gland, embryo E17.CNhs11043.1263-45I158.58
adrenal gland, embryo E18.CNhs11026.1262-18F552.30
adrenal gland, neonate N00.CNhs11191.1311-23C171.02
adrenal gland, neonate N25.CNhs11223.1377-27I343.86
amnion, adult pregnant day17.5.CNhs10488.583-22A815.08
aorta, adult.CNhs10498.46-23H110.99
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F576.52
bone (os femoris), neonate N16.CNhs11225.1525-43A667.58
bone (os femoris), neonate N20.CNhs11195.1350-25C368.37
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H723.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C791.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D153.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D489.97
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F1642.09
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B225.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1163.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A268.92
epididymis, adult.CNhs10490.58-23B232.85
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C6148.08
eyeball, embryo E14.CNhs10521.399-16E2181.85
eyeball, embryo E15.CNhs10593.426-16C9202.21
eyeball, embryo E17.CNhs11023.1261-18D4194.41
eyeball, neonate N00.CNhs11207.633-15C6335.42
eyeball, neonate N01.CNhs11140.1532-43E7337.32
eyeball, neonate N02.CNhs11205.1551-44G8344.07
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E2201.34
forelimb, embryo E12.CNhs10600.359-14H2227.87
forelimb, embryo E13.CNhs10589.384-1E2198.47
forelimb, embryo E14.CNhs10577.413-26A8158.70
forelimb, embryo E15.CNhs11007.437-20E7136.24
forelimb, embryo E17.CNhs10598.1517-43C496.81
forelimb, embryo E18.CNhs11008.1520-43B592.60
gonad, embryo E13.CNhs11044.1564-45I6173.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D534.10
heart, embryo E11.CNhs10586.331-24E9133.60
heart, embryo E12.CNhs11015.353-12F5147.75
heart, embryo E13.CNhs11013.376-3I9134.15
heart, embryo E14.CNhs10597.403-26D4182.77
heart, embryo E15.CNhs11017.431-16C8148.56
heart, embryo E16.CNhs11021.457-17C6123.57
heart, embryo E17.CNhs11025.479-18E5119.06
heart, embryo E18.CNhs11030.1283-20G3150.50
heart, neonate N00.CNhs11213.639-21E3191.85
heart, neonate N03.CNhs11221.1349-25I2226.76
heart, neonate N10.CNhs11118.749-24G1145.29
heart, neonate N16.CNhs11209.782-15G194.04
heart, neonate N20.CNhs11127.821-26I657.46
heart, neonate N25.CNhs11196.1351-25D388.04
heart, neonate N30.CNhs11202.1390-42D268.71
hippocampus, adult.CNhs10478.13-16E89.88
hippocampus, neonate N00.CNhs11228.627-43G1433.33
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A321.68
intestine, embryo E12.CNhs11019.1251-16I5187.05
intestine, embryo E13.CNhs11010.381-16D5161.87
intestine, embryo E15.CNhs10602.976-16D893.94
intestine, embryo E16.CNhs10585.463-22H455.87
intestine, embryo E17.CNhs10582.482-18D357.60
intestine, embryo E18.CNhs10526.1289-20F754.21
intestine, neonate N00.CNhs11126.644-26D136.54
intestine, neonate N01.CNhs11192.1322-23E939.36
intestine, neonate N06.CNhs11102.688-20B854.54
intestine, neonate N07.CNhs11095.720-20F260.48
intestine, neonate N10.CNhs11098.755-23A558.88
intestine, neonate N20.CNhs11187.827-18D140.45
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G134.65
kidney, embryo E14.CNhs10606.411-4I9154.96
kidney, embryo E15.CNhs10997.434-16F8116.88
kidney, embryo E16.CNhs10584.464-22A5125.11
kidney, embryo E17.CNhs11028.483-18I2102.44
kidney, embryo E18.CNhs11001.1288-20C796.98
kidney, neonate N00.CNhs11214.646-21G7112.29
kidney, neonate N10.CNhs11206.758-6D5154.74
kidney, neonate N20.CNhs11113.832-19I133.80
kidney, neonate N25.CNhs11122.1353-25F343.02
kidney, neonate N30.CNhs11203.1385-42H127.52
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F821.69
liver, embryo E13.CNhs10524.378-3H624.96
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D714.00
liver, embryo E16.CNhs10523.462-17F516.64
liver, embryo E17.CNhs10510.481-18A322.92
liver, embryo E18.CNhs10579.499-43G414.10
liver, neonate N00.CNhs11117.641-24F414.59
liver, neonate N03.CNhs11123.1345-25G211.81
liver, neonate N06.CNhs11101.684-20A838.82
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B927.77
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B138.43
lung, embryo E12.CNhs10522.354-16G2185.13
lung, embryo E14.CNhs10604.404-26F8184.48
lung, embryo E15.CNhs11020.432-17C5147.51
lung, embryo E16.CNhs10998.458-17B6115.23
lung, embryo E17.CNhs10605.480-44A6103.52
lung, embryo E18.CNhs10583.1287-20I689.74
lung, neonate N00.CNhs11224.640-42C6124.11
lung, neonate N06.CNhs11212.683-20E5264.67
lung, neonate N07.CNhs11111.715-19A3259.78
lung, neonate N10.CNhs11219.750-23E6332.46
lung, neonate N20.CNhs11109.822-18A496.68
lung, neonate N25.CNhs11119.1359-25C7123.64
lung, neonate N30.CNhs11133.1394-42H271.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H240.01
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A314.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7156.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1164.70
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2166.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3255.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7217.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8272.71
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9203.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4187.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5260.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6249.82
olfactory brain, adult.CNhs10489.18-22I991.58
ovary, adult.CNhs10507.91-2I7186.79
ovary, embryo E18.CNhs11040.505-44H7165.07
ovary, neonate N00.CNhs11217.1299-22I4165.00
oviduct, adult pregnant day01.CNhs10500.988-6G6219.74
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F4169.22
pancreas, embryo E15.CNhs11042.1556-45F2110.05
pancreas, embryo E16.CNhs11003.460-26E564.69
pancreas, embryo E17.CNhs10599.1558-45G367.62
pancreas, embryo E18.CNhs10580.1535-43I771.32
pancreas, neonate N00.CNhs11105.645-26G963.57
pancreas, neonate N01.CNhs11138.1531-43D7111.60
pancreas, neonate N02.CNhs11139.1539-43D8109.44
pancreas, neonate N16.CNhs11136.787-43B633.50
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G862.30
pituitary gland, embryo E12.CNhs11018.346-16E6197.17
pituitary gland, embryo E13.CNhs11009.370-44C7189.64
pituitary gland, embryo E14.CNhs11037.398-44A5171.26
pituitary gland, embryo E15.CNhs10592.427-16B9173.26
pituitary gland, embryo E16.CNhs11036.449-43F6166.42
pituitary gland, embryo E17.CNhs11039.1265-44F5122.10
pituitary gland, neonate N00.CNhs11190.1308-22E972.77
placenta, adult pregnant day10.CNhs10472.539-13I723.94
placenta, adult pregnant day17.CNhs10464.577-18G327.11
prostate, adult.CNhs10470.859-1F818.74
skin, adult.CNhs10492.30-1C315.17
skin, neonate N00.CNhs11124.650-25G490.10
skin, neonate N03.CNhs11215.662-22H377.14
skin, neonate N06.CNhs11097.693-20I578.67
skin, neonate N10.CNhs11108.762-6C477.97
small intestine, neonate N16.CNhs11114.790-21I138.48
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C1133.12
spleen, embryo E18.CNhs11011.1271-21F245.74
spleen, neonate N10.CNhs11116.752-24D119.97
spleen, neonate N20.CNhs11112.824-19H112.44
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6131.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9142.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3128.94
stomach, adult.CNhs10503.33-1H624.82
stomach, embryo E12.CNhs10588.356-43E3185.37
stomach, embryo E15.CNhs10603.1252-16G8137.44
stomach, embryo E16.CNhs11022.459-17D483.92
stomach, embryo E17.CNhs11006.1035-18D581.34
stomach, embryo E18.CNhs10999.1286-20C672.06
stomach, neonate N03.CNhs11193.1340-24B857.45
stomach, neonate N07.CNhs11210.718-18A990.51
stomach, neonate N25.CNhs11104.1355-25E444.76
stomach, neonate N30.CNhs11134.1386-42I124.89
submandibular gland, adult.CNhs10469.59-29C144.12
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F5163.12
testis, embryo E15.CNhs11034.443-27C5164.80
testis, embryo E16.CNhs11033.470-26G5159.26
testis, embryo E17.CNhs11029.486-18I5133.29
testis, embryo E18.CNhs11027.503-18G5113.88
testis, neonate N00.CNhs11189.1300-22B7142.71
testis, neonate N07.CNhs11222.726-26I4127.73
testis, neonate N10.CNhs11204.763-44D967.21
testis, neonate N20.CNhs11110.839-18H322.47
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B5218.36
thymus, embryo E14.CNhs11041.402-44I4145.15
thymus, embryo E15.CNhs11005.430-45I2126.23
thymus, embryo E16.CNhs11002.456-26C5130.57
thymus, embryo E17.CNhs10581.478-18C1134.81
thymus, embryo E18.CNhs10595.1273-19G4187.36
thymus, neonate N02.CNhs11181.1541-43F8159.62
thymus, neonate N03.CNhs11137.2104-43C7179.59
thymus, neonate N06.CNhs11197.681-26C4179.32
thymus, neonate N07.CNhs11211.713-19D3172.84
thymus, neonate N10.CNhs11194.748-24E4168.18
thymus, neonate N20.CNhs11186.820-7A2192.87
thymus, neonate N25.CNhs11125.1362-25G7195.12
thymus, neonate N30.CNhs11132.1393-42G2211.78
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E447.33
uterus, adult pregnant day19.CNhs10497.590-15F546.36
uterus, adult.CNhs10509.92-27E5185.90
vagina, adult.CNhs10502.89-27D5138.91
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.70
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I8219.10
whole body, embryo E12.CNhs10587.857-27C9263.36
whole body, embryo E13.CNhs10512.372-23H2221.78
whole body, embryo E14.5.CNhs10578.420-27D2126.66
whole body, embryo E14.CNhs10519.395-14B1171.46
whole body, embryo E16.CNhs10514.453-14F2103.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G590.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5100.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5102.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5101.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G595.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G587.33
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G582.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G581.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G582.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5101.93
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G597.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G587.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G598.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5108.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G588.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G582.88
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G583.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5100.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G593.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G587.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G593.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G589.97
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G599.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5109.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G590.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G596.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G582.66
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G588.62
whole body, embryo E17.5.CNhs10513.490-9F9105.52
whole body, embryo E17.CNhs10517.475-3I5261.05
whole body, embryo E18.CNhs10516.493-3B3116.03
whole body, neonate N00.CNhs10525.657-19C2121.19
whole body, neonate N01.CNhs10576.659-23C653.18
whole body, neonate N06.CNhs10515.692-21D170.37
whole body, neonate N10.CNhs10518.761-6B474.66





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell3.25e-0839
electrically active cell3.25e-0839
ectodermal cell6.77e-0844
neurectodermal cell6.77e-0844
neuron7.57e-0833
neuronal stem cell7.57e-0833
neuroblast7.57e-0833
electrically signaling cell7.57e-0833
neural cell1.02e-0743







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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