FFCP PHASE1:Mm9::chr13:30776511..30776542,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:30776511..30776542,-|id=chr13:30776511..30776542,-|ontology_enrichment_celltype=CL:0000553!6.61e-14!6;CL:0000556!6.61e-14!6;CL:0000050!2.51e-09!9;CL:0002027!1.13e-07!3;CL:0002006!1.13e-07!3;CL:0002024!1.13e-07!3;CL:0000414!1.18e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,2.21e-15,6;CL:0000556,2.21e-15,6;CL:0000050,1.26e-10,9;CL:0002027,1.88e-08,3;CL:0002006,1.88e-08,3;CL:0002024,1.88e-08,3;CL:0000839,1.13e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!6.53e-16!3;UBERON:0001962!6.92e-11!2;UBERON:0001961!6.92e-11!2;UBERON:0001744!6.92e-11!2;UBERON:0002193!3.57e-09!48;UBERON:0002106!4.57e-08!6;UBERON:0004457!4.57e-08!6;UBERON:0000042!4.57e-08!6;UBERON:0004854!4.57e-08!6;UBERON:0009034!4.57e-08!6;UBERON:0002095!4.57e-08!6;UBERON:0004782!4.57e-08!6;UBERON:0003281!4.57e-08!6;UBERON:0009664!4.57e-08!6;UBERON:0002296!4.57e-08!6;UBERON:0005602!4.57e-08!6;UBERON:0001179!4.57e-08!6;UBERON:0006293!4.57e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.06e-23,1;UBERON:0001097,3.06e-23,1;UBERON:0003968,3.06e-23,1;UBERON:0001467,3.06e-23,1;UBERON:0002465,1.13e-08,3;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0.630924330716475,1.50825876966313,0,0.0850432901510698,0,0,0.319984845586813,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.50919862576798,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:30776511..30776542,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:30776511..30776542,- | |||
|id=chr13:30776511..30776542,- | |||
|ontology_enrichment_celltype=CL:0000553!6.61e-14!6;CL:0000556!6.61e-14!6;CL:0000050!2.51e-09!9;CL:0002027!1.13e-07!3;CL:0002006!1.13e-07!3;CL:0002024!1.13e-07!3;CL:0000414!1.18e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.21e-15,6;CL:0000556,2.21e-15,6;CL:0000050,1.26e-10,9;CL:0002027,1.88e-08,3;CL:0002006,1.88e-08,3;CL:0002024,1.88e-08,3;CL:0000839,1.13e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!6.53e-16!3;UBERON:0001962!6.92e-11!2;UBERON:0001961!6.92e-11!2;UBERON:0001744!6.92e-11!2;UBERON:0002193!3.57e-09!48;UBERON:0002106!4.57e-08!6;UBERON:0004457!4.57e-08!6;UBERON:0000042!4.57e-08!6;UBERON:0004854!4.57e-08!6;UBERON:0009034!4.57e-08!6;UBERON:0002095!4.57e-08!6;UBERON:0004782!4.57e-08!6;UBERON:0003281!4.57e-08!6;UBERON:0009664!4.57e-08!6;UBERON:0002296!4.57e-08!6;UBERON:0005602!4.57e-08!6;UBERON:0001179!4.57e-08!6;UBERON:0006293!4.57e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.06e-23,1;UBERON:0001097,3.06e-23,1;UBERON:0003968,3.06e-23,1;UBERON:0001467,3.06e-23,1;UBERON:0002465,1.13e-08,3;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0.630924330716475,1.50825876966313,0,0.0850432901510698,0,0,0.319984845586813,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.50919862576798,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:30776511..30776542,- | |||
}} |
Revision as of 00:19, 13 September 2013
Short description: | p@chr13:30776511..30776542, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30776511..30776542, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.21e-15 | 6 |
megakaryocyte | 2.21e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 1.26e-10 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.88e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.88e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.88e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.13e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.06e-23 | 1 |
axillary lymph node | 3.06e-23 | 1 |
peripheral lymph node | 3.06e-23 | 1 |
shoulder | 3.06e-23 | 1 |
lymphoid system | 1.13e-08 | 3 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.