FFCP PHASE1:Mm9::chr13:4278603..4278619,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=622402|HGNC=|MCL_coexpression_id=195|UniProt=Q9JLI0,Q571M4|association_with_transcript=25bp_to_NM_013777,uc007pjn.1_5end|description=CAGE_peak_2_at_Akr1c12_5end|id=chr13:4278603..4278619,-|ontology_enrichment_celltype=CL:0002563!3.86e-08!9;CL:0002251!3.86e-08!9;CL:0000066!6.73e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,7.19e-14,9;CL:0002251,7.19e-14,9;CL:0000066,3.25e-10,25;CL:0002076,2.96e-09,15;CL:0000239,4.01e-09,6;CL:0000677,4.01e-09,6;CL:0000584,4.01e-09,6;CL:0000223,7.61e-08,20;CL:0000075,1.03e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!6.89e-29!128;UBERON:0001555!6.89e-29!128;UBERON:0007026!6.89e-29!128;UBERON:0004119!5.45e-28!130;UBERON:0000925!5.45e-28!130;UBERON:0006595!5.45e-28!130;UBERON:0005409!3.80e-27!59;UBERON:0004921!4.79e-27!126;UBERON:0004185!4.79e-27!126;UBERON:0000160!7.52e-23!43;UBERON:0000344!3.07e-13!15;UBERON:0003929!8.64e-12!55;UBERON:0001242!2.23e-11!13;UBERON:0000060!2.23e-11!13;UBERON:0001262!2.23e-11!13;UBERON:0004786!2.23e-11!13;UBERON:0005911!1.48e-08!69;UBERON:0000490!2.42e-08!66;UBERON:0003350!3.86e-08!9;UBERON:0004808!3.86e-08!9;UBERON:0001277!3.86e-08!9;UBERON:0001041!6.37e-08!92;UBERON:0004923!1.18e-07!24;UBERON:0000481!2.16e-07!230;UBERON:0000077!2.80e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-36,31;UBERON:0005409,2.10e-33,47;UBERON:0000344,2.04e-23,15;UBERON:0001007,6.61e-22,116;UBERON:0001555,6.61e-22,116;UBERON:0007026,6.61e-22,116;UBERON:0004119,2.40e-21,118;UBERON:0000925,2.40e-21,118;UBERON:0006595,2.40e-21,118;UBERON:0001242,6.30e-20,13;UBERON:0001262,6.30e-20,13;UBERON:0004786,6.30e-20,13;UBERON:0004921,1.28e-19,114;UBERON:0003350,7.19e-14,9;UBERON:0004808,7.19e-14,9;UBERON:0001277,7.19e-14,9;UBERON:0004923,3.85e-13,24;UBERON:0000485,5.23e-11,11;UBERON:0011216,3.91e-07,194;UBERON:0003929,3.94e-07,55;UBERON:0002108,4.35e-07,4|phase1_expression=0,2.44282785347553,4.09499315450582,1.20985684522732,1.00179145989269,2.51818907867835,1.16806320297763,0,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0,0,5.27974995218242,4.12936705920906,3.44539178469012,3.01533397311352,4.09395342103189,1.90023419456374,2.26827116783938,3.54768817048488,0,0,0,2.88851619751275,3.82339684324532,4.69589519403449,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,0,2.15881276655127,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,9.31958806090611,0,0,1.78819938646014,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,10.2429822724977,1.32225283331772,0.213288250535234,0.464473343720877,0.515469845288373,2.42020229548011,1.77902435075896,4.94586627892654,5.21981967698963,3.62337700392824,8.04272668160862,6.76452004939913,3.70431765526328,0.898819408654221,2.16138049874694,7.36822711041159,0,0,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0.123397163921801,1.1858105083486,0.333690211432188,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,1.64736847912849,1.43768206527355,0,0.624075346229121,1.26289438973556,1.07638448113147,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,1.88605079755898,0,0,2.32585463851399,1.45413491791002,2.85197902707777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.33184669303881,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.559805809294632,0.276399947608848,0.954670618015114,0.474503990371703,0.813277868507395,1.51207477150522,2.09088296014469,2.40198820120795,0.809186078308924,1.32245529160537,1.83229159388821,26.5710695248175,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0.316011120628178,4.05450430580328,5.44368072973584,3.11809975146708,0.358053391334963,0,0.360586348559907,0.590758108698309,0,0.304827226619999,0,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0.754505365544305,0.468207537349412,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.25384382367503,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p2@Akr1c12}} | ||
|EntrezGene=622402 | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|UniProt=Q9JLI0,Q571M4 | |||
|association_with_transcript=25bp_to_NM_013777,uc007pjn.1_5end | |||
|description=CAGE_peak_2_at_Akr1c12_5end | |||
|id=chr13:4278603..4278619,- | |||
|ontology_enrichment_celltype=CL:0002563!3.86e-08!9;CL:0002251!3.86e-08!9;CL:0000066!6.73e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.19e-14,9;CL:0002251,7.19e-14,9;CL:0000066,3.25e-10,25;CL:0002076,2.96e-09,15;CL:0000239,4.01e-09,6;CL:0000677,4.01e-09,6;CL:0000584,4.01e-09,6;CL:0000223,7.61e-08,20;CL:0000075,1.03e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!6.89e-29!128;UBERON:0001555!6.89e-29!128;UBERON:0007026!6.89e-29!128;UBERON:0004119!5.45e-28!130;UBERON:0000925!5.45e-28!130;UBERON:0006595!5.45e-28!130;UBERON:0005409!3.80e-27!59;UBERON:0004921!4.79e-27!126;UBERON:0004185!4.79e-27!126;UBERON:0000160!7.52e-23!43;UBERON:0000344!3.07e-13!15;UBERON:0003929!8.64e-12!55;UBERON:0001242!2.23e-11!13;UBERON:0000060!2.23e-11!13;UBERON:0001262!2.23e-11!13;UBERON:0004786!2.23e-11!13;UBERON:0005911!1.48e-08!69;UBERON:0000490!2.42e-08!66;UBERON:0003350!3.86e-08!9;UBERON:0004808!3.86e-08!9;UBERON:0001277!3.86e-08!9;UBERON:0001041!6.37e-08!92;UBERON:0004923!1.18e-07!24;UBERON:0000481!2.16e-07!230;UBERON:0000077!2.80e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-36,31;UBERON:0005409,2.10e-33,47;UBERON:0000344,2.04e-23,15;UBERON:0001007,6.61e-22,116;UBERON:0001555,6.61e-22,116;UBERON:0007026,6.61e-22,116;UBERON:0004119,2.40e-21,118;UBERON:0000925,2.40e-21,118;UBERON:0006595,2.40e-21,118;UBERON:0001242,6.30e-20,13;UBERON:0001262,6.30e-20,13;UBERON:0004786,6.30e-20,13;UBERON:0004921,1.28e-19,114;UBERON:0003350,7.19e-14,9;UBERON:0004808,7.19e-14,9;UBERON:0001277,7.19e-14,9;UBERON:0004923,3.85e-13,24;UBERON:0000485,5.23e-11,11;UBERON:0011216,3.91e-07,194;UBERON:0003929,3.94e-07,55;UBERON:0002108,4.35e-07,4 | |||
|phase1_expression=0,2.44282785347553,4.09499315450582,1.20985684522732,1.00179145989269,2.51818907867835,1.16806320297763,0,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0,0,5.27974995218242,4.12936705920906,3.44539178469012,3.01533397311352,4.09395342103189,1.90023419456374,2.26827116783938,3.54768817048488,0,0,0,2.88851619751275,3.82339684324532,4.69589519403449,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,0,2.15881276655127,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,9.31958806090611,0,0,1.78819938646014,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,10.2429822724977,1.32225283331772,0.213288250535234,0.464473343720877,0.515469845288373,2.42020229548011,1.77902435075896,4.94586627892654,5.21981967698963,3.62337700392824,8.04272668160862,6.76452004939913,3.70431765526328,0.898819408654221,2.16138049874694,7.36822711041159,0,0,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0.123397163921801,1.1858105083486,0.333690211432188,0,0,0.202860121388503,0.482354319504834,0,0,0.162135226775035,1.64736847912849,1.43768206527355,0,0.624075346229121,1.26289438973556,1.07638448113147,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,1.88605079755898,0,0,2.32585463851399,1.45413491791002,2.85197902707777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,2.33184669303881,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.559805809294632,0.276399947608848,0.954670618015114,0.474503990371703,0.813277868507395,1.51207477150522,2.09088296014469,2.40198820120795,0.809186078308924,1.32245529160537,1.83229159388821,26.5710695248175,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0.316011120628178,4.05450430580328,5.44368072973584,3.11809975146708,0.358053391334963,0,0.360586348559907,0.590758108698309,0,0.304827226619999,0,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0.754505365544305,0.468207537349412,0.320125762024346,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.25384382367503,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p2@Akr1c12 | |||
}} |
Revision as of 00:33, 13 September 2013
Short description: | p2@Akr1c12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Akr1c12_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 25bp_to_NM_013777, uc007pjn.1_5end |
EntrezGene: | Akr1c12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.19e-14 | 9 |
epithelial cell of alimentary canal | 7.19e-14 | 9 |
epithelial cell | 3.25e-10 | 25 |
endo-epithelial cell | 2.96e-09 | 15 |
brush border epithelial cell | 4.01e-09 | 6 |
gut absorptive cell | 4.01e-09 | 6 |
enterocyte | 4.01e-09 | 6 |
endodermal cell | 7.61e-08 | 20 |
columnar/cuboidal epithelial cell | 1.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.48e-36 | 31 |
gastrointestinal system | 2.10e-33 | 47 |
mucosa | 2.04e-23 | 15 |
digestive system | 6.61e-22 | 116 |
digestive tract | 6.61e-22 | 116 |
primitive gut | 6.61e-22 | 116 |
endoderm-derived structure | 2.40e-21 | 118 |
endoderm | 2.40e-21 | 118 |
presumptive endoderm | 2.40e-21 | 118 |
intestinal mucosa | 6.30e-20 | 13 |
wall of intestine | 6.30e-20 | 13 |
gastrointestinal system mucosa | 6.30e-20 | 13 |
subdivision of digestive tract | 1.28e-19 | 114 |
epithelium of mucosa | 7.19e-14 | 9 |
gastrointestinal system epithelium | 7.19e-14 | 9 |
intestinal epithelium | 7.19e-14 | 9 |
organ component layer | 3.85e-13 | 24 |
simple columnar epithelium | 5.23e-11 | 11 |
organ system subdivision | 3.91e-07 | 194 |
gut epithelium | 3.94e-07 | 55 |
small intestine | 4.35e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.