FFCP PHASE1:Mm9::chr13:76081148..76081208,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73296|HGNC=|UniProt=Q9CTN4,Q8BV11|association_with_transcript=63bp_to_NM_028493,uc007rfy.1,uc007rfz.1_5end|description=CAGE_peak_2_at_Rhobtb3_5end|id=chr13:76081148..76081208,-|ontology_enrichment_celltype=CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70;CL:0000055!1.11e-08!50;CL:0000393!7.96e-08!39;CL:0000211!7.96e-08!39;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0002319!3.10e-07!43|ontology_enrichment_celltype_v019_2=CL:0002321,7.71e-09,70;CL:0000393,9.44e-08,39;CL:0000211,9.44e-08,39;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44;CL:0002319,4.33e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.79e-10!75;UBERON:0001016!8.79e-10!75;UBERON:0001017!1.07e-09!73;UBERON:0005743!1.07e-09!73;UBERON:0004121!1.72e-07!102;UBERON:0000924!1.72e-07!102;UBERON:0006601!1.72e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.17e-09,75;UBERON:0001017,1.43e-09,73;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95|phase1_expression=4.96461426024861,6.2815573375085,9.09998478779072,16.030603199262,24.543890767371,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0.699561878128147,0,0.137114433605739,0.42438965179803,3.40173160604279,0.0992909512008853,0.261199789138935,1.91990907352088,1.83527424853736,1.72269589234506,6.46142994238612,1.72376986148711,1.14014051673824,1.26015064879965,0.221730510655305,0.635030673459631,0,0,2.88851619751275,3.15845826181135,3.06254034393554,0,0,0,0,0,0,11.4566104357775,13.4831318521954,8.81024410376071,0.782391344348039,18.0960879795771,5.71184075109627,4.6663175777828,6.7193482380174,12.9377307928474,0,0,0,5.65970759279083,8.30946975822394,4.12537673821954,3.43937983461316,3.1739458756322,3.80298842103708,4.40497891689872,3.55717918444456,0.449949858640699,0,0.7104801149461,4.19440154725767,5.37905627450176,4.87341177849845,4.3201900266141,4.6271491497304,4.28476476605705,5.74258206474195,3.42974237801871,3.1629005436018,0.919218786610021,11.0115880999389,10.5980490610706,10.1380311949121,3.16527090552465,2.92760459527711,2.6045668527838,8.65467296904281,6.75315132038016,7.48711414106369,2.94628585473668,3.41692033917847,4.10078780815661,4.46784540665786,3.55186332501892,2.02905142091174,0,1.3599426674155,2.15881276655127,4.54843492213368,2.68816132258401,3.37066608316204,4.77204903218562,3.11743205523443,3.88673531961374,7.04217098883402,3.84979432242953,17.8363667794652,28.4426681261332,1.29894624606728,1.77351905832569,3.0331466700887,3.4255163915718,0,3.56261133755579,2.25530924795977,3.04465478312141,1.84492397804847,2.71300752994721,3.17489509266403,2.63899841792318,0.988779870937496,4.19338135067744,1.76922110389975,6.79420769779119,3.3126227769059,1.45462575940567,0,7.90508151931177,9.63454851341893,4.85368404896324,0.718890747035522,0,0.381210681219194,14.0803201040533,11.4375150704657,2.26177833803156,5.04090528557602,5.62574006126727,12.0517065844545,7.94982189032012,5.70300437561771,2.61254638281195,5.05445516867349,4.41927897361595,1.17108398666433,5.51765050640335,4.14142898552303,3.16480117455002,3.06164246180975,3.97152532883034,3.37326208415024,3.88055056108524,2.15567992932842,5.8622884852024,6.68614271823006,6.1374805079721,5.83899223373756,4.179025998266,5.96768195583036,4.37875387000685,1.40442637462647,0,0.284163499395593,2.27838349789052,1.87620847984877,2.16074473753218,2.84093682702252,2.75469924446365,3.5481435964097,2.55787339225449,4.29237442239391,2.80236821681207,2.46839774870221,2.79084688934462,3.4859588104718,4.09359964790931,2.85415149878366,3.08674763148855,5.04695876553905,5.04232600658494,13.2167513193519,4.7601101999438,2.34617075588757,2.09013004674395,4.12375876230699,4.63872106633688,5.11469500843202,6.27744566171445,12.3377556001573,4.44687177754829,3.77002813200404,3.38226002469956,2.14460495831032,4.49409704327111,4.97117514711797,10.1562049359727,2.46568271239006,4.45569199177942,2.25415471346161,4.68398054044223,5.23671715352589,5.47059395144485,3.35153646758564,2.36176236767363,1.56998727841375,0.616985819609003,0.889357881261447,1.16791574001266,0.589676985339609,0.899448449539415,0.811440485554012,1.68824011826692,2.80088436959562,3.16465751195892,1.62135226775035,1.64736847912849,1.43768206527355,3.34926852901653,2.49630138491648,2.77836765741823,3.40855085691633,2.8946611281802,1.47802552133284,3.7898282354097,2.11854469374634,3.56464680127895,2.11221223459652,2.68010011906905,2.85652369063216,1.36593553500459,6.30540576424764,3.10050565508285,5.10255259703959,2.45794972073607,0.863424909329478,1.59113964439663,0,0,1.96705709207614,1.93155722413313,10.5963389391943,13.0104972117346,11.1475762856139,5.04941854408746,7.2566890465739,7.41833614163613,6.89354872744957,5.73525115086125,5.56996685205985,6.79383673893198,8.09621403349789,8.18316402151673,5.13874111330481,7.71171159412337,3.69044221541498,2.84904965867608,4.72372182125371,4.61916344323099,2.65490276679926,1.69946445308487,2.11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| ||
|EntrezGene=73296 | |||
|HGNC= | |||
|UniProt=Q9CTN4,Q8BV11 | |||
|association_with_transcript=63bp_to_NM_028493,uc007rfy.1,uc007rfz.1_5end | |||
|description=CAGE_peak_2_at_Rhobtb3_5end | |||
|id=chr13:76081148..76081208,- | |||
|ontology_enrichment_celltype=CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70;CL:0000055!1.11e-08!50;CL:0000393!7.96e-08!39;CL:0000211!7.96e-08!39;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0002319!3.10e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.71e-09,70;CL:0000393,9.44e-08,39;CL:0000211,9.44e-08,39;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44;CL:0002319,4.33e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.79e-10!75;UBERON:0001016!8.79e-10!75;UBERON:0001017!1.07e-09!73;UBERON:0005743!1.07e-09!73;UBERON:0004121!1.72e-07!102;UBERON:0000924!1.72e-07!102;UBERON:0006601!1.72e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.17e-09,75;UBERON:0001017,1.43e-09,73;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95 | |||
|phase1_expression=4.96461426024861,6.2815573375085,9.09998478779072,16.030603199262,24.543890767371,1.51091344720701,1.40167584357315,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0.699561878128147,0,0.137114433605739,0.42438965179803,3.40173160604279,0.0992909512008853,0.261199789138935,1.91990907352088,1.83527424853736,1.72269589234506,6.46142994238612,1.72376986148711,1.14014051673824,1.26015064879965,0.221730510655305,0.635030673459631,0,0,2.88851619751275,3.15845826181135,3.06254034393554,0,0,0,0,0,0,11.4566104357775,13.4831318521954,8.81024410376071,0.782391344348039,18.0960879795771,5.71184075109627,4.6663175777828,6.7193482380174,12.9377307928474,0,0,0,5.65970759279083,8.30946975822394,4.12537673821954,3.43937983461316,3.1739458756322,3.80298842103708,4.40497891689872,3.55717918444456,0.449949858640699,0,0.7104801149461,4.19440154725767,5.37905627450176,4.87341177849845,4.3201900266141,4.6271491497304,4.28476476605705,5.74258206474195,3.42974237801871,3.1629005436018,0.919218786610021,11.0115880999389,10.5980490610706,10.1380311949121,3.16527090552465,2.92760459527711,2.6045668527838,8.65467296904281,6.75315132038016,7.48711414106369,2.94628585473668,3.41692033917847,4.10078780815661,4.46784540665786,3.55186332501892,2.02905142091174,0,1.3599426674155,2.15881276655127,4.54843492213368,2.68816132258401,3.37066608316204,4.77204903218562,3.11743205523443,3.88673531961374,7.04217098883402,3.84979432242953,17.8363667794652,28.4426681261332,1.29894624606728,1.77351905832569,3.0331466700887,3.4255163915718,0,3.56261133755579,2.25530924795977,3.04465478312141,1.84492397804847,2.71300752994721,3.17489509266403,2.63899841792318,0.988779870937496,4.19338135067744,1.76922110389975,6.79420769779119,3.3126227769059,1.45462575940567,0,7.90508151931177,9.63454851341893,4.85368404896324,0.718890747035522,0,0.381210681219194,14.0803201040533,11.4375150704657,2.26177833803156,5.04090528557602,5.62574006126727,12.0517065844545,7.94982189032012,5.70300437561771,2.61254638281195,5.05445516867349,4.41927897361595,1.17108398666433,5.51765050640335,4.14142898552303,3.16480117455002,3.06164246180975,3.97152532883034,3.37326208415024,3.88055056108524,2.15567992932842,5.8622884852024,6.68614271823006,6.1374805079721,5.83899223373756,4.179025998266,5.96768195583036,4.37875387000685,1.40442637462647,0,0.284163499395593,2.27838349789052,1.87620847984877,2.16074473753218,2.84093682702252,2.75469924446365,3.5481435964097,2.55787339225449,4.29237442239391,2.80236821681207,2.46839774870221,2.79084688934462,3.4859588104718,4.09359964790931,2.85415149878366,3.08674763148855,5.04695876553905,5.04232600658494,13.2167513193519,4.7601101999438,2.34617075588757,2.09013004674395,4.12375876230699,4.63872106633688,5.11469500843202,6.27744566171445,12.3377556001573,4.44687177754829,3.77002813200404,3.38226002469956,2.14460495831032,4.49409704327111,4.97117514711797,10.1562049359727,2.46568271239006,4.45569199177942,2.25415471346161,4.68398054044223,5.23671715352589,5.47059395144485,3.35153646758564,2.36176236767363,1.56998727841375,0.616985819609003,0.889357881261447,1.16791574001266,0.589676985339609,0.899448449539415,0.811440485554012,1.68824011826692,2.80088436959562,3.16465751195892,1.62135226775035,1.64736847912849,1.43768206527355,3.34926852901653,2.49630138491648,2.77836765741823,3.40855085691633,2.8946611281802,1.47802552133284,3.7898282354097,2.11854469374634,3.56464680127895,2.11221223459652,2.68010011906905,2.85652369063216,1.36593553500459,6.30540576424764,3.10050565508285,5.10255259703959,2.45794972073607,0.863424909329478,1.59113964439663,0,0,1.96705709207614,1.93155722413313,10.5963389391943,13.0104972117346,11.1475762856139,5.04941854408746,7.2566890465739,7.41833614163613,6.89354872744957,5.73525115086125,5.56996685205985,6.79383673893198,8.09621403349789,8.18316402151673,5.13874111330481,7.71171159412337,3.69044221541498,2.84904965867608,4.72372182125371,4.61916344323099,2.65490276679926,1.69946445308487,2.11626489875326,3.39489143560617,2.06711325016541,3.07435147943927,4.39328098385976,7.27067458955011,3.20847640546249,3.79244109522979,1.05418608574999,3.09406629744561,4.42571487479924,1.8006109403131,2.19909762430683,4.71541477069503,2.83744373827638,3.0322698992352,3.9491764944509,2.13125464380219,1.87737366450968,0.42366414172764,1.54369878638473,3.2977250588296,5.65125493435669,3.61877549568935,2.86493625607528,1.64140899745061,4.95517422270746,13.9068976507882,0.683483523191411,1.857481811669,2.59272338317596,0.188368457004691,1.23024804948923,0.915112692826091,1.01987057996313,0.979660166265606,1.38199973804424,0,2.05618395827738,4.06638934253697,3.45617090629764,4.18176592028937,4.36725127492355,3.77620169877498,3.80205896336545,2.35580347785627,2.85152941241944,1.24267862617385,4.50954350947352,7.62534384824292,5.29467169462712,6.02798683866548,5.03723311563151,6.08242051766801,7.51086327332825,7.68205870579306,12.7928400199367,10.8712854371703,5.18454011264158,0.316011120628178,1.82452693761148,2.46506297195585,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| |||
|short_description=p2@Rhobtb3 | |||
}} | |||
Revision as of 01:07, 13 September 2013
| Short description: | p2@Rhobtb3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rhobtb3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 63bp_to_NM_028493, uc007rfy.1, uc007rfz.1_5end |
| EntrezGene: | Rhobtb3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 7.71e-09 | 70 |
| electrically responsive cell | 9.44e-08 | 39 |
| electrically active cell | 9.44e-08 | 39 |
| ectodermal cell | 1.80e-07 | 44 |
| neurectodermal cell | 1.80e-07 | 44 |
| neural cell | 4.33e-07 | 43 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.17e-09 | 75 |
| central nervous system | 1.43e-09 | 73 |
| ectoderm-derived structure | 3.18e-08 | 95 |
| ectoderm | 3.18e-08 | 95 |
| presumptive ectoderm | 3.18e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
