FFCP PHASE1:Hg19::chr3:78719667..78719679,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6091|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10249|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000498428,uc011bgl.1_5end|coexpression_cluster_id=C361|description=CAGE_peak_17_at_ROBO1_5end|id=chr3:78719667..78719679,-|ontology_enrichment_celltype=CL:0002605!5.68e-12!3;CL:0000047!2.70e-08!8|ontology_enrichment_celltype_v019=CL:0000047;2.03e-45;2!CL:0002319;4.32e-08;25|ontology_enrichment_celltype_v019_2=CL:0000047,1.12e-25,8;CL:0002319,4.32e-08,25|ontology_enrichment_development_v019=UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;4.59e-23;1!DOID:1357;4.59e-23;1|ontology_enrichment_disease_v019_2=DOID:0050619,5.13e-23,1;DOID:1357,5.13e-23,1|ontology_enrichment_uberon=UBERON:0001049!8.53e-93!57;UBERON:0005068!8.53e-93!57;UBERON:0006241!8.53e-93!57;UBERON:0007135!8.53e-93!57;UBERON:0001017!7.72e-88!82;UBERON:0005743!2.21e-83!86;UBERON:0002780!5.75e-83!41;UBERON:0001890!5.75e-83!41;UBERON:0006240!5.75e-83!41;UBERON:0003080!7.53e-81!42;UBERON:0002616!6.63e-80!59;UBERON:0001893!7.13e-77!34;UBERON:0002020!2.21e-76!34;UBERON:0003528!2.21e-76!34;UBERON:0000073!1.06e-74!94;UBERON:0001016!1.06e-74!94;UBERON:0002791!1.77e-73!33;UBERON:0001869!3.04e-70!32;UBERON:0000955!6.68e-70!69;UBERON:0006238!6.68e-70!69;UBERON:0003075!2.87e-65!86;UBERON:0007284!2.87e-65!86;UBERON:0002346!5.65e-62!90;UBERON:0000956!3.27e-58!25;UBERON:0000203!3.27e-58!25;UBERON:0003056!1.35e-53!61;UBERON:0002619!3.12e-48!22;UBERON:0001950!1.42e-41!20;UBERON:0000033!2.45e-40!123;UBERON:0000153!4.75e-38!129;UBERON:0007811!4.75e-38!129;UBERON:0004121!1.21e-37!169;UBERON:0007023!4.89e-37!115;UBERON:0000924!1.49e-36!173;UBERON:0006601!1.49e-36!173;UBERON:0000025!8.73e-24!194;UBERON:0001871!2.98e-21!7;UBERON:0002420!6.70e-20!9;UBERON:0007245!6.70e-20!9;UBERON:0010009!6.70e-20!9;UBERON:0010011!6.70e-20!9;UBERON:0000454!6.70e-20!9;UBERON:0000349!1.32e-19!5;UBERON:0002308!4.11e-19!9;UBERON:0000125!4.11e-19!9;UBERON:0004111!2.74e-17!241;UBERON:0002298!1.53e-15!8;UBERON:0000200!5.59e-15!6;UBERON:0003076!4.62e-14!15;UBERON:0003057!4.62e-14!15;UBERON:0000477!4.65e-14!286;UBERON:0009663!3.08e-13!7;UBERON:0000483!4.01e-13!309;UBERON:0000119!6.66e-13!312;UBERON:0001872!1.22e-12!5;UBERON:0000064!3.95e-12!219;UBERON:0000988!2.66e-11!3;UBERON:0006331!3.30e-11!3;UBERON:0002771!5.08e-11!3;UBERON:0000475!2.07e-10!365;UBERON:0004733!5.11e-10!12;UBERON:0002028!5.11e-10!12;UBERON:0007277!5.11e-10!12;UBERON:0000369!3.13e-09!4;UBERON:0002435!3.13e-09!4;UBERON:0000204!3.13e-09!4;UBERON:0010082!3.13e-09!4;UBERON:0004732!3.35e-09!13;UBERON:0001876!5.72e-09!2;UBERON:0001954!1.06e-08!2;UBERON:0003022!1.06e-08!2;UBERON:0002421!1.06e-08!2;UBERON:0002600!1.06e-08!2;UBERON:0001894!2.10e-08!7;UBERON:0006222!2.10e-08!7;UBERON:0002360!5.24e-08!2;UBERON:0000094!5.24e-08!2;UBERON:0007645!5.24e-08!2;UBERON:0002148!6.28e-08!2;UBERON:0009662!6.28e-08!2;UBERON:0002021!2.86e-07!5|ontology_enrichment_uberon_v019=UBERON:0001764;4.59e-23;1!UBERON:0001825;4.59e-23;1!UBERON:0002114;1.04e-08;2!UBERON:0002240;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0001137;1.35e-08;3!UBERON:0001016;3.68e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.13e-23,1;UBERON:0001825,5.13e-23,1;UBERON:0001017,1.43e-09,81;UBERON:0002114,1.12e-08,2;UBERON:0001016,1.25e-08,89;UBERON:0002240,1.51e-08,3;UBERON:0005174,1.51e-08,3;UBERON:0001137,1.51e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.90969034467607,13.0139853857622,0.773288812777695,2.84777651068393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99424864653152,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8230403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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000498428,uc011bgl.1_5end | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_17_at_ROBO1_5end | |||
|id=chr3:78719667..78719679,- | |||
|ontology_enrichment_celltype=CL:0002605!5.68e-12!3;CL:0000047!2.70e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.03e-45;2!CL:0002319;4.32e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.12e-25,8;CL:0002319,4.32e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.59e-23;1!DOID:1357;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.13e-23,1;DOID:1357,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.53e-93!57;UBERON:0005068!8.53e-93!57;UBERON:0006241!8.53e-93!57;UBERON:0007135!8.53e-93!57;UBERON:0001017!7.72e-88!82;UBERON:0005743!2.21e-83!86;UBERON:0002780!5.75e-83!41;UBERON:0001890!5.75e-83!41;UBERON:0006240!5.75e-83!41;UBERON:0003080!7.53e-81!42;UBERON:0002616!6.63e-80!59;UBERON:0001893!7.13e-77!34;UBERON:0002020!2.21e-76!34;UBERON:0003528!2.21e-76!34;UBERON:0000073!1.06e-74!94;UBERON:0001016!1.06e-74!94;UBERON:0002791!1.77e-73!33;UBERON:0001869!3.04e-70!32;UBERON:0000955!6.68e-70!69;UBERON:0006238!6.68e-70!69;UBERON:0003075!2.87e-65!86;UBERON:0007284!2.87e-65!86;UBERON:0002346!5.65e-62!90;UBERON:0000956!3.27e-58!25;UBERON:0000203!3.27e-58!25;UBERON:0003056!1.35e-53!61;UBERON:0002619!3.12e-48!22;UBERON:0001950!1.42e-41!20;UBERON:0000033!2.45e-40!123;UBERON:0000153!4.75e-38!129;UBERON:0007811!4.75e-38!129;UBERON:0004121!1.21e-37!169;UBERON:0007023!4.89e-37!115;UBERON:0000924!1.49e-36!173;UBERON:0006601!1.49e-36!173;UBERON:0000025!8.73e-24!194;UBERON:0001871!2.98e-21!7;UBERON:0002420!6.70e-20!9;UBERON:0007245!6.70e-20!9;UBERON:0010009!6.70e-20!9;UBERON:0010011!6.70e-20!9;UBERON:0000454!6.70e-20!9;UBERON:0000349!1.32e-19!5;UBERON:0002308!4.11e-19!9;UBERON:0000125!4.11e-19!9;UBERON:0004111!2.74e-17!241;UBERON:0002298!1.53e-15!8;UBERON:0000200!5.59e-15!6;UBERON:0003076!4.62e-14!15;UBERON:0003057!4.62e-14!15;UBERON:0000477!4.65e-14!286;UBERON:0009663!3.08e-13!7;UBERON:0000483!4.01e-13!309;UBERON:0000119!6.66e-13!312;UBERON:0001872!1.22e-12!5;UBERON:0000064!3.95e-12!219;UBERON:0000988!2.66e-11!3;UBERON:0006331!3.30e-11!3;UBERON:0002771!5.08e-11!3;UBERON:0000475!2.07e-10!365;UBERON:0004733!5.11e-10!12;UBERON:0002028!5.11e-10!12;UBERON:0007277!5.11e-10!12;UBERON:0000369!3.13e-09!4;UBERON:0002435!3.13e-09!4;UBERON:0000204!3.13e-09!4;UBERON:0010082!3.13e-09!4;UBERON:0004732!3.35e-09!13;UBERON:0001876!5.72e-09!2;UBERON:0001954!1.06e-08!2;UBERON:0003022!1.06e-08!2;UBERON:0002421!1.06e-08!2;UBERON:0002600!1.06e-08!2;UBERON:0001894!2.10e-08!7;UBERON:0006222!2.10e-08!7;UBERON:0002360!5.24e-08!2;UBERON:0000094!5.24e-08!2;UBERON:0007645!5.24e-08!2;UBERON:0002148!6.28e-08!2;UBERON:0009662!6.28e-08!2;UBERON:0002021!2.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;4.59e-23;1!UBERON:0001825;4.59e-23;1!UBERON:0002114;1.04e-08;2!UBERON:0002240;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0001137;1.35e-08;3!UBERON:0001016;3.68e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.13e-23,1;UBERON:0001825,5.13e-23,1;UBERON:0001017,1.43e-09,81;UBERON:0002114,1.12e-08,2;UBERON:0001016,1.25e-08,89;UBERON:0002240,1.51e-08,3;UBERON:0005174,1.51e-08,3;UBERON:0001137,1.51e-08,3 | |||
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|short_description=p17@ROBO1 | |||
}} |
Revision as of 01:26, 13 September 2013
Short description: | p17@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_ROBO1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 10bp_to_ENST00000498428, uc011bgl.1_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.12e-25 | 8 |
neural cell | 4.32e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.13e-23 | 1 |
paranasal sinus | 5.13e-23 | 1 |
central nervous system | 1.43e-09 | 81 |
duodenum | 1.12e-08 | 2 |
nervous system | 1.25e-08 | 89 |
spinal cord | 1.51e-08 | 3 |
dorsal region element | 1.51e-08 | 3 |
dorsum | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.13e-23 | 1 |
maxillary sinus cancer | 5.13e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.