FFCP PHASE1:Mm9::chr14:31973812..31973825,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:31973812..31973825,-|id=chr14:31973812..31973825,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000473,6.49e-19,7;CL:0002194,2.90e-12,4;CL:0000766,2.90e-12,4;CL:0000234,2.90e-12,4;CL:0000576,2.90e-12,4;CL:0000235,2.90e-12,4;CL:0000864,2.90e-12,4;CL:0002009,2.90e-12,4;CL:0000040,2.90e-12,4;CL:0000559,2.90e-12,4;CL:0000239,4.58e-11,6;CL:0000677,4.58e-11,6;CL:0000584,4.58e-11,6;CL:0000066,2.40e-10,25;CL:0002092,1.47e-09,3;CL:0002540,1.47e-09,3;CL:0000075,1.96e-09,7;CL:0000682,2.71e-08,3;CL:0002076,1.24e-07,15;CL:0002563,2.95e-07,9;CL:0002251,2.95e-07,9;CL:0002476,4.56e-07,2;CL:0000223,4.75e-07,20;CL:0000557,5.70e-07,7;CL:0000878,8.12e-07,2;CL:0000129,8.12e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.46e-08,16;UBERON:0000344,4.93e-08,15;UBERON:0000160,5.94e-08,31;UBERON:0003350,2.95e-07,9;UBERON:0004808,2.95e-07,9;UBERON:0001277,2.95e-07,9;UBERON:0001242,6.09e-07,13;UBERON:0001262,6.09e-07,13;UBERON:0004786,6.09e-07,13|phase1_expression=0,3.48975407639361,3.18499467572675,1.51232105653415,1.50268718983904,0.839396359559449,1.63528848416868,0.387369970324729,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,3.67982572424835,0.91763712426868,2.8711598205751,1.29228598847722,1.50829862880122,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,1.45653105909346,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0.338844532069132,0,4.49949858640699,5.93319817540185,7.104801149461,4.49400165777607,4.61061966385865,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.0755715601067855,0,0.860423876981386,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,0.760079596425296,1.01104889002957,0,0,0.890652834388949,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,1.78819938646014,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.63460661282178,1.05780226665418,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.795825888164603,0,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.592905254174298,0,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,1.15078454980324,2.10775794807546,1.09824565275233,0,2.97712758134803,0.936113019343682,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.345369963731791,0,15.0791283939272,19.5806046174735,0,0.551873492609465,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0.457556346413045,0.679913719975421,1.39951452323658,1.38199973804424,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0.335769232728157,0.386379188064381,0.563047426353546,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.419226325255965,0,0,0.618105171716683,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.689531376628944,0,0.464810523557898,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0|short_description=p@chr14:31973812..31973825,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:31973812..31973825,- | |||
|id=chr14:31973812..31973825,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.49e-19,7;CL:0002194,2.90e-12,4;CL:0000766,2.90e-12,4;CL:0000234,2.90e-12,4;CL:0000576,2.90e-12,4;CL:0000235,2.90e-12,4;CL:0000864,2.90e-12,4;CL:0002009,2.90e-12,4;CL:0000040,2.90e-12,4;CL:0000559,2.90e-12,4;CL:0000239,4.58e-11,6;CL:0000677,4.58e-11,6;CL:0000584,4.58e-11,6;CL:0000066,2.40e-10,25;CL:0002092,1.47e-09,3;CL:0002540,1.47e-09,3;CL:0000075,1.96e-09,7;CL:0000682,2.71e-08,3;CL:0002076,1.24e-07,15;CL:0002563,2.95e-07,9;CL:0002251,2.95e-07,9;CL:0002476,4.56e-07,2;CL:0000223,4.75e-07,20;CL:0000557,5.70e-07,7;CL:0000878,8.12e-07,2;CL:0000129,8.12e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.46e-08,16;UBERON:0000344,4.93e-08,15;UBERON:0000160,5.94e-08,31;UBERON:0003350,2.95e-07,9;UBERON:0004808,2.95e-07,9;UBERON:0001277,2.95e-07,9;UBERON:0001242,6.09e-07,13;UBERON:0001262,6.09e-07,13;UBERON:0004786,6.09e-07,13 | |||
|phase1_expression=0,3.48975407639361,3.18499467572675,1.51232105653415,1.50268718983904,0.839396359559449,1.63528848416868,0.387369970324729,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,3.67982572424835,0.91763712426868,2.8711598205751,1.29228598847722,1.50829862880122,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,1.45653105909346,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0.338844532069132,0,4.49949858640699,5.93319817540185,7.104801149461,4.49400165777607,4.61061966385865,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.0755715601067855,0,0.860423876981386,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,0.760079596425296,1.01104889002957,0,0,0.890652834388949,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,1.78819938646014,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.63460661282178,1.05780226665418,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.795825888164603,0,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.592905254174298,0,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,1.15078454980324,2.10775794807546,1.09824565275233,0,2.97712758134803,0.936113019343682,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.345369963731791,0,15.0791283939272,19.5806046174735,0,0.551873492609465,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0.457556346413045,0.679913719975421,1.39951452323658,1.38199973804424,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0.335769232728157,0.386379188064381,0.563047426353546,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.419226325255965,0,0,0.618105171716683,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.689531376628944,0,0.464810523557898,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p@chr14:31973812..31973825,- | |||
}} |
Revision as of 01:58, 13 September 2013
Short description: | p@chr14:31973812..31973825, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:31973812..31973825, - |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.49e-19 | 7 |
monopoietic cell | 2.90e-12 | 4 |
myeloid leukocyte | 2.90e-12 | 4 |
phagocyte | 2.90e-12 | 4 |
monocyte | 2.90e-12 | 4 |
macrophage | 2.90e-12 | 4 |
tissue-resident macrophage | 2.90e-12 | 4 |
macrophage dendritic cell progenitor | 2.90e-12 | 4 |
monoblast | 2.90e-12 | 4 |
promonocyte | 2.90e-12 | 4 |
brush border epithelial cell | 4.58e-11 | 6 |
gut absorptive cell | 4.58e-11 | 6 |
enterocyte | 4.58e-11 | 6 |
epithelial cell | 2.40e-10 | 25 |
bone marrow cell | 1.47e-09 | 3 |
mesenchymal stem cell of the bone marrow | 1.47e-09 | 3 |
columnar/cuboidal epithelial cell | 1.96e-09 | 7 |
M cell of gut | 2.71e-08 | 3 |
endo-epithelial cell | 1.24e-07 | 15 |
intestinal epithelial cell | 2.95e-07 | 9 |
epithelial cell of alimentary canal | 2.95e-07 | 9 |
bone marrow macrophage | 4.56e-07 | 2 |
endodermal cell | 4.75e-07 | 20 |
granulocyte monocyte progenitor cell | 5.70e-07 | 7 |
central nervous system macrophage | 8.12e-07 | 2 |
microglial cell | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.46e-08 | 16 |
mucosa | 4.93e-08 | 15 |
intestine | 5.94e-08 | 31 |
epithelium of mucosa | 2.95e-07 | 9 |
gastrointestinal system epithelium | 2.95e-07 | 9 |
intestinal epithelium | 2.95e-07 | 9 |
intestinal mucosa | 6.09e-07 | 13 |
wall of intestine | 6.09e-07 | 13 |
gastrointestinal system mucosa | 6.09e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.