FFCP PHASE1:Mm9::chr14:47896665..47896684,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67296|HGNC=|MCL_coexpression_id=1230|UniProt=Q91ZA6|association_with_transcript=59bp_to_ENSMUST00000065562_5end|description=CAGE_peak_2_at_Socs4_5end|id=chr14:47896665..47896684,+|ontology_enrichment_celltype=CL:0000063!4.53e-10!66;CL:0002076!8.77e-08!15;CL:0000838!2.36e-07!12;CL:0000066!4.67e-07!25;CL:0000542!6.46e-07!13;CL:0000051!6.46e-07!13;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11|ontology_enrichment_celltype_v019_2=CL:0002076,8.77e-08,15;CL:0000838,2.36e-07,12;CL:0000066,4.67e-07,25;CL:0000542,6.46e-07,13;CL:0000051,6.46e-07,13;CL:0000084,8.72e-07,11;CL:0000827,8.72e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.18e-20!128;UBERON:0001555!1.18e-20!128;UBERON:0007026!1.18e-20!128;UBERON:0004119!7.05e-20!130;UBERON:0000925!7.05e-20!130;UBERON:0006595!7.05e-20!130;UBERON:0004921!1.19e-19!126;UBERON:0004185!1.19e-19!126;UBERON:0000160!5.90e-13!43;UBERON:0005409!1.03e-12!59;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0003408!7.25e-11!24;UBERON:0005911!8.52e-11!69;UBERON:0004177!9.14e-11!29;UBERON:0003929!1.07e-10!55;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000072!2.05e-10!27;UBERON:0000490!2.87e-10!66;UBERON:0000065!1.71e-09!41;UBERON:0001041!2.24e-09!92;UBERON:0001004!3.78e-09!42;UBERON:0000344!4.76e-09!15;UBERON:0002193!5.43e-09!48;UBERON:0001242!3.37e-08!13;UBERON:0000060!3.37e-08!13;UBERON:0001262!3.37e-08!13;UBERON:0004786!3.37e-08!13;UBERON:0000077!7.67e-08!97;UBERON:0002390!9.73e-08!45;UBERON:0003061!9.73e-08!45;UBERON:0005057!1.85e-07!51;UBERON:0002405!2.83e-07!70;UBERON:0000063!8.09e-07!35;UBERON:0004923!8.76e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.70e-18,116;UBERON:0001555,1.70e-18,116;UBERON:0007026,1.70e-18,116;UBERON:0004119,9.95e-18,118;UBERON:0000925,9.95e-18,118;UBERON:0006595,9.95e-18,118;UBERON:0004921,1.52e-17,114;UBERON:0000160,2.94e-12,31;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0005409,1.82e-11,47;UBERON:0003408,7.24e-11,24;UBERON:0005911,8.52e-11,69;UBERON:0004177,9.13e-11,29;UBERON:0005057,9.13e-11,29;UBERON:0003929,1.07e-10,55;UBERON:0006562,1.80e-10,24;UBERON:0001557,1.80e-10,24;UBERON:0001042,1.80e-10,24;UBERON:0008814,1.80e-10,24;UBERON:0009145,1.80e-10,24;UBERON:0000072,2.05e-10,27;UBERON:0000490,2.87e-10,66;UBERON:0000065,1.71e-09,41;UBERON:0001004,3.78e-09,42;UBERON:0000344,4.76e-09,15;UBERON:0002193,5.41e-09,48;UBERON:0002405,5.41e-09,48;UBERON:0001242,3.37e-08,13;UBERON:0001262,3.37e-08,13;UBERON:0004786,3.37e-08,13;UBERON:0000077,5.72e-08,35;UBERON:0001041,7.03e-08,80;UBERON:0002390,9.69e-08,45;UBERON:0003061,9.69e-08,45;UBERON:0004923,8.76e-07,24|phase1_expression=4.32401887182944,32.4547129104606,38.6749353481106,28.7341000741489,29.5528480668345,18.8024784541317,12.1478573109673,15.236552166106,15.20518199238,14.7460651582856,14.2110913627169,15.4757988450953,16.606470803327,12.8507991555926,9.66018309265422,8.09901069559304,5.59649502502517,12.7762176970086,14.9454732630255,14.8536378129311,3.40173160604279,10.2269679736912,8.61959304158487,13.5993559374396,10.782236210157,21.8208146363708,21.5380998079537,15.513928753384,9.69119439227507,15.3738379153558,11.5299865540758,6.98533740805594,4.30545351309199,15.8481681015439,10.9763615505484,8.6442015586416,11.2293145944303,7.53356935326434,11.720030167857,6.80580867165938,11.1763982725893,8.19654581950135,12.62326917881,6.04304726282771,4.8660926985367,6.60768307782054,3.9119567217402,2.61630187656536,2.63623419281366,3.30530828426282,1.95980990275508,1.43752564364972,15.4359997573117,13.0565185562042,14.7881271622684,4.88792928468299,5.44413535883638,3.6097046459421,4.04632921719196,3.1739458756322,5.70448263155561,3.04960078862219,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,2.39680088414724,0.768436610643109,3.21437798156281,2.70011876663381,2.10324961351382,1.42825492201902,1.32521124570968,2.69479758272899,3.25874601462004,0.919218786610021,1.10115880999389,2.042997409363,1.99688493233117,3.56092976871523,3.47653045689157,4.68822033501084,0.558365998002762,0.56276261003168,1.22238598221448,2.35702868378934,2.70506193518296,4.28718725398191,7.72407171998477,5.66786700800891,11.0148505706638,7.74381489283248,4.75979933595425,2.69851595818909,3.24888208723835,7.16843019355737,6.17955448579708,8.18065548374677,6.49465011507172,6.36011234118612,4.64783285263046,17.9657068380045,15.2883143823987,21.3320010945999,7.14420435337007,7.600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| ||
|EntrezGene=67296 | |||
|HGNC= | |||
|MCL_coexpression_id=1230 | |||
|UniProt=Q91ZA6 | |||
|association_with_transcript=59bp_to_ENSMUST00000065562_5end | |||
|description=CAGE_peak_2_at_Socs4_5end | |||
|id=chr14:47896665..47896684,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.53e-10!66;CL:0002076!8.77e-08!15;CL:0000838!2.36e-07!12;CL:0000066!4.67e-07!25;CL:0000542!6.46e-07!13;CL:0000051!6.46e-07!13;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.77e-08,15;CL:0000838,2.36e-07,12;CL:0000066,4.67e-07,25;CL:0000542,6.46e-07,13;CL:0000051,6.46e-07,13;CL:0000084,8.72e-07,11;CL:0000827,8.72e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.18e-20!128;UBERON:0001555!1.18e-20!128;UBERON:0007026!1.18e-20!128;UBERON:0004119!7.05e-20!130;UBERON:0000925!7.05e-20!130;UBERON:0006595!7.05e-20!130;UBERON:0004921!1.19e-19!126;UBERON:0004185!1.19e-19!126;UBERON:0000160!5.90e-13!43;UBERON:0005409!1.03e-12!59;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0003408!7.25e-11!24;UBERON:0005911!8.52e-11!69;UBERON:0004177!9.14e-11!29;UBERON:0003929!1.07e-10!55;UBERON:0006562!1.81e-10!24;UBERON:0001557!1.81e-10!24;UBERON:0001042!1.81e-10!24;UBERON:0008814!1.81e-10!24;UBERON:0009145!1.81e-10!24;UBERON:0000072!2.05e-10!27;UBERON:0000490!2.87e-10!66;UBERON:0000065!1.71e-09!41;UBERON:0001041!2.24e-09!92;UBERON:0001004!3.78e-09!42;UBERON:0000344!4.76e-09!15;UBERON:0002193!5.43e-09!48;UBERON:0001242!3.37e-08!13;UBERON:0000060!3.37e-08!13;UBERON:0001262!3.37e-08!13;UBERON:0004786!3.37e-08!13;UBERON:0000077!7.67e-08!97;UBERON:0002390!9.73e-08!45;UBERON:0003061!9.73e-08!45;UBERON:0005057!1.85e-07!51;UBERON:0002405!2.83e-07!70;UBERON:0000063!8.09e-07!35;UBERON:0004923!8.76e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.70e-18,116;UBERON:0001555,1.70e-18,116;UBERON:0007026,1.70e-18,116;UBERON:0004119,9.95e-18,118;UBERON:0000925,9.95e-18,118;UBERON:0006595,9.95e-18,118;UBERON:0004921,1.52e-17,114;UBERON:0000160,2.94e-12,31;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0005409,1.82e-11,47;UBERON:0003408,7.24e-11,24;UBERON:0005911,8.52e-11,69;UBERON:0004177,9.13e-11,29;UBERON:0005057,9.13e-11,29;UBERON:0003929,1.07e-10,55;UBERON:0006562,1.80e-10,24;UBERON:0001557,1.80e-10,24;UBERON:0001042,1.80e-10,24;UBERON:0008814,1.80e-10,24;UBERON:0009145,1.80e-10,24;UBERON:0000072,2.05e-10,27;UBERON:0000490,2.87e-10,66;UBERON:0000065,1.71e-09,41;UBERON:0001004,3.78e-09,42;UBERON:0000344,4.76e-09,15;UBERON:0002193,5.41e-09,48;UBERON:0002405,5.41e-09,48;UBERON:0001242,3.37e-08,13;UBERON:0001262,3.37e-08,13;UBERON:0004786,3.37e-08,13;UBERON:0000077,5.72e-08,35;UBERON:0001041,7.03e-08,80;UBERON:0002390,9.69e-08,45;UBERON:0003061,9.69e-08,45;UBERON:0004923,8.76e-07,24 | |||
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| |||
|short_description=p2@Socs4 | |||
}} |
Revision as of 02:11, 13 September 2013
Short description: | p2@Socs4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Socs4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1230 |
Association with transcript: | 59bp_to_ENSMUST00000065562_5end |
EntrezGene: | Socs4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.77e-08 | 15 |
lymphoid lineage restricted progenitor cell | 2.36e-07 | 12 |
epithelial cell | 4.67e-07 | 25 |
lymphocyte | 6.46e-07 | 13 |
common lymphoid progenitor | 6.46e-07 | 13 |
T cell | 8.72e-07 | 11 |
pro-T cell | 8.72e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.