FFCP PHASE1:Hg19::chr4:120987899..120987928,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4085|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6763|TSSclassifier=S|UniProt=|association_with_transcript=47bp_to_ENST00000511295_5end|coexpression_cluster_id=C109|description=CAGE_peak_2_at_MAD2L1_5end|id=chr4:120987899..120987928,-|ontology_enrichment_celltype=CL:0000548!1.87e-12!679;CL:0000004!1.87e-12!679;CL:0000255!1.87e-12!679;CL:0000012!2.36e-12!682;CL:0000066!3.53e-11!254;CL:0000133!1.80e-08!59;CL:0000333!7.04e-08!41;CL:0002319!1.76e-07!25;CL:0000221!3.21e-07!71;CL:0000003!3.22e-07!722|ontology_enrichment_celltype_v019=CL:0002319;5.13e-08;25!CL:0000147;7.22e-07;14|ontology_enrichment_celltype_v019_2=CL:0000333,3.40e-10,41;CL:0000133,6.41e-10,59;CL:0002319,5.74e-08,25;CL:0000221,2.89e-07,72;CL:0000148,7.18e-07,10;CL:0000541,7.18e-07,10;CL:0000147,7.59e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!5.92e-52!235;DOID:14566!2.13e-50!239;DOID:0050686!7.15e-28!137;DOID:0050687!3.36e-23!143;DOID:2531!4.44e-21!51;DOID:0060083!4.44e-21!51;DOID:305!7.26e-19!106;DOID:1240!1.83e-17!39;DOID:8692!3.69e-14!31|ontology_enrichment_disease_v019=DOID:1240;1.72e-18;39!DOID:8692;2.10e-18;31!DOID:2531;1.52e-16;51!DOID:0060083;1.52e-16;51!DOID:0060058;1.69e-08;10!DOID:1036;2.38e-07;8!DOID:0050686;7.01e-07;137|ontology_enrichment_disease_v019_2=DOID:162,8.21e-44,235;DOID:14566,7.57e-42,239;DOID:2531,8.05e-28,51;DOID:0060083,8.05e-28,51;DOID:0050686,4.28e-25,137;DOID:1240,1.88e-23,39;DOID:8692,4.16e-19,31;DOID:0050687,4.10e-17,143;DOID:305,5.53e-14,106;DOID:0060058,6.38e-09,10;DOID:1036,2.76e-07,8|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0,0.261185628199839,0.982935746006035,0.697801167972428,0,0,0.37129905888014,0,0,0,0,1.46379839637152,0.861847406537515,0.408001382488506,0,4.29353980696585,3.69560947696787,3.51519390865448,1.60468152070698,1.72411237844886,1.65292640758726,0,0,0,0.919421224478927,0,0,4.49309763365749,5.2602616020346,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10707267820062,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0.552700035571697,0,0,0,0,0.566546713487831,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,1.34140171940727,0.767175371061182,2.1686349143074,0,0.144846518960824,0,0,1.70162670895322,0.886917589850256,0.702678285545008,0.0654895377488563,0,0.741568885568859,0,0,0.26591592103773,0,0,0.371457501329565,0.79504962946682,0,0,0,0,0,0.626984899610432,0.516833518338658,0,0,0.402829317109147,0,0,2.20597848207521,0,1.25019619597712,0.673588117878509,0.675668882899933,1.53316637465883,0,1.09921046358244,0,0,0.436094052142534,0,1.2663051166458,0,0,1.06400514659507,0,1.06748995729705,0,0.933633106199299,0.404132016209064,1.47115712802113,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,1.52664848236894,0.971237666208789,1.12360645361799,0.204154171254893,0.491337269247072,0.206651562351531,0,0.741800787835671,1.82032272387605,0,2.69337782326506,0.750711119231785,1.10825646193673,0,0,0.150238058906597,2.49550802952046,1.07633781413317,0.213557388818567,0.847727604638247,0.900273288253207,0.824420233907511,0,0.558350568994769,1.0126579934476,1.07180705677318,1.26216887122057,0.644349290496095,0.161646056818812,0.355009592516614,1.91428986632517,1.18692414617341,0.193260853163297,0.272746120590835,0.286804595389004,1.95157929807353,0.662648841607426,1.74290914304278,1.14027160516907,2.52320850875628,2.18986415445498,0,0,0,0,0,2.24782920075703,1.85443159085912,1.68707720918437,1.21323370005633,1.08939722046203,2.37270619111097,2.42696354688296,2.74710051175484,1.15424147083917,0,0,0.4115740113314,0,0,0,0,3.5317047953172,1.47586126251736,1.02940686179115,0.439001141634502,0,1.00528972411631,0.277765335475589,0,0,0,1.15930404975077,0.117408694235822,0.288732895522148,0.925971025153221,0,1.58040879591855,1.71697232418975,0,0.234004265139238,0.594524649154913,1.87467667973554,0.335964256397719,0.425325291727159,1.61205340865127,2.90633938513962,1.53353071666084,0.492663237895943,0.352193736052904,0,0,0,5.20682733195786,1.90994212779139,1.17217447210047,1.71072446022705,2.87916979569306,4.20480280981484,2.00078502841405,0.672786506072164,0,3.2268845761218,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,0.57191197463259,0.542621605391443,1.64648067356154,2.93162565864362,0.355391948742546,3.95975936466715,0,0,0.299918973546171,0,0,0,0.718874566474748,0,1.42636905040718,0.868687840005475,0.61642896765115,1.61154866915906,2.24170287987055,0,0.215627574859517,0.128343036279748,3.04913549066956,1.30139853857622,1.54657762555539,1.50764638800914,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,4.64957918974806,0.5531075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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4085 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6763 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000511295_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_MAD2L1_5end | |||
|id=chr4:120987899..120987928,- | |||
|ontology_enrichment_celltype=CL:0000548!1.87e-12!679;CL:0000004!1.87e-12!679;CL:0000255!1.87e-12!679;CL:0000012!2.36e-12!682;CL:0000066!3.53e-11!254;CL:0000133!1.80e-08!59;CL:0000333!7.04e-08!41;CL:0002319!1.76e-07!25;CL:0000221!3.21e-07!71;CL:0000003!3.22e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.13e-08;25!CL:0000147;7.22e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.40e-10,41;CL:0000133,6.41e-10,59;CL:0002319,5.74e-08,25;CL:0000221,2.89e-07,72;CL:0000148,7.18e-07,10;CL:0000541,7.18e-07,10;CL:0000147,7.59e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.92e-52!235;DOID:14566!2.13e-50!239;DOID:0050686!7.15e-28!137;DOID:0050687!3.36e-23!143;DOID:2531!4.44e-21!51;DOID:0060083!4.44e-21!51;DOID:305!7.26e-19!106;DOID:1240!1.83e-17!39;DOID:8692!3.69e-14!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.72e-18;39!DOID:8692;2.10e-18;31!DOID:2531;1.52e-16;51!DOID:0060083;1.52e-16;51!DOID:0060058;1.69e-08;10!DOID:1036;2.38e-07;8!DOID:0050686;7.01e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.21e-44,235;DOID:14566,7.57e-42,239;DOID:2531,8.05e-28,51;DOID:0060083,8.05e-28,51;DOID:0050686,4.28e-25,137;DOID:1240,1.88e-23,39;DOID:8692,4.16e-19,31;DOID:0050687,4.10e-17,143;DOID:305,5.53e-14,106;DOID:0060058,6.38e-09,10;DOID:1036,2.76e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@MAD2L1 | |||
}} |
Revision as of 02:15, 13 September 2013
Short description: | p2@MAD2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MAD2L1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 47bp_to_ENST00000511295_5end |
EntrezGene: | MAD2L1 |
HGNC: | 6763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.40e-10 | 41 |
neurectodermal cell | 6.41e-10 | 59 |
neural cell | 5.74e-08 | 25 |
ectodermal cell | 2.89e-07 | 72 |
melanocyte | 7.18e-07 | 10 |
melanoblast | 7.18e-07 | 10 |
pigment cell | 7.59e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.21e-44 | 235 |
disease of cellular proliferation | 7.57e-42 | 239 |
hematologic cancer | 8.05e-28 | 51 |
immune system cancer | 8.05e-28 | 51 |
organ system cancer | 4.28e-25 | 137 |
leukemia | 1.88e-23 | 39 |
myeloid leukemia | 4.16e-19 | 31 |
cell type cancer | 4.10e-17 | 143 |
carcinoma | 5.53e-14 | 106 |
lymphoma | 6.38e-09 | 10 |
chronic leukemia | 2.76e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.