FFCP PHASE1:Mm9::chr14:55432981..55432993,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=70|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:55432981..55432993,+|id=chr14:55432981..55432993,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.33e-52!18;UBERON:0005564!2.33e-52!18;UBERON:0004176!6.21e-48!17;UBERON:0009196!6.21e-48!17;UBERON:0009117!6.21e-48!17;UBERON:0003133!1.45e-44!24;UBERON:0000473!4.67e-42!14;UBERON:0005156!5.46e-41!26;UBERON:0000990!5.46e-41!26;UBERON:0003135!3.70e-39!15;UBERON:0003101!1.27e-36!16;UBERON:0000079!1.27e-36!16;UBERON:0002323!1.67e-24!37;UBERON:0004458!1.67e-24!37;UBERON:0003886!8.30e-24!38;UBERON:0002553!3.80e-23!39;UBERON:0000464!3.37e-15!57;UBERON:0000466!2.23e-10!79;UBERON:0000992!2.23e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.92e-31,17;UBERON:0009196,1.92e-31,17;UBERON:0009117,1.92e-31,17;UBERON:0000991,1.04e-29,18;UBERON:0005564,1.04e-29,18;UBERON:0000473,3.13e-28,14;UBERON:0003135,2.28e-26,15;UBERON:0003101,9.77e-25,16;UBERON:0000079,9.77e-25,16;UBERON:0003133,2.52e-22,24;UBERON:0005156,1.28e-20,26;UBERON:0000990,1.28e-20,26;UBERON:0002323,1.64e-14,37;UBERON:0004458,1.64e-14,37;UBERON:0003886,3.93e-14,38;UBERON:0002553,9.04e-14,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,1.04661582230785,0.66183396182839,2.91676782516071,0.904118764344118,0.337912250981556,0.821500670520278,0.911430693907651,4.92838918800841,8.21386010808421,5.18454011264158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:55432981..55432993,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:55432981..55432993,+ | |||
|id=chr14:55432981..55432993,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.33e-52!18;UBERON:0005564!2.33e-52!18;UBERON:0004176!6.21e-48!17;UBERON:0009196!6.21e-48!17;UBERON:0009117!6.21e-48!17;UBERON:0003133!1.45e-44!24;UBERON:0000473!4.67e-42!14;UBERON:0005156!5.46e-41!26;UBERON:0000990!5.46e-41!26;UBERON:0003135!3.70e-39!15;UBERON:0003101!1.27e-36!16;UBERON:0000079!1.27e-36!16;UBERON:0002323!1.67e-24!37;UBERON:0004458!1.67e-24!37;UBERON:0003886!8.30e-24!38;UBERON:0002553!3.80e-23!39;UBERON:0000464!3.37e-15!57;UBERON:0000466!2.23e-10!79;UBERON:0000992!2.23e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.92e-31,17;UBERON:0009196,1.92e-31,17;UBERON:0009117,1.92e-31,17;UBERON:0000991,1.04e-29,18;UBERON:0005564,1.04e-29,18;UBERON:0000473,3.13e-28,14;UBERON:0003135,2.28e-26,15;UBERON:0003101,9.77e-25,16;UBERON:0000079,9.77e-25,16;UBERON:0003133,2.52e-22,24;UBERON:0005156,1.28e-20,26;UBERON:0000990,1.28e-20,26;UBERON:0002323,1.64e-14,37;UBERON:0004458,1.64e-14,37;UBERON:0003886,3.93e-14,38;UBERON:0002553,9.04e-14,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,1.04661582230785,0.66183396182839,2.91676782516071,0.904118764344118,0.337912250981556,0.821500670520278,0.911430693907651,4.92838918800841,8.21386010808421,5.18454011264158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:55432981..55432993,+ | |||
}} |
Revision as of 02:26, 13 September 2013
Short description: | p@chr14:55432981..55432993, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55432981..55432993, + |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 1.92e-31 | 17 |
indifferent external genitalia | 1.92e-31 | 17 |
indifferent gonad | 1.92e-31 | 17 |
gonad | 1.04e-29 | 18 |
gonad primordium | 1.04e-29 | 18 |
testis | 3.13e-28 | 14 |
male reproductive organ | 2.28e-26 | 15 |
male organism | 9.77e-25 | 16 |
male reproductive system | 9.77e-25 | 16 |
reproductive organ | 2.52e-22 | 24 |
reproductive structure | 1.28e-20 | 26 |
reproductive system | 1.28e-20 | 26 |
body cavity | 1.64e-14 | 37 |
body cavity or lining | 1.64e-14 | 37 |
body cavity precursor | 3.93e-14 | 38 |
anatomical cavity | 9.04e-14 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.