FFCP PHASE1:Mm9::chr14:66598681..66598692,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=290|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66598681..66598692,+|id=chr14:66598681..66598692,+|ontology_enrichment_celltype=CL:0002453!5.45e-07!8|ontology_enrichment_celltype_v019_2=CL:0000182,1.02e-13,5;CL:0000068,1.50e-09,3;CL:0002202,1.50e-09,3;CL:0000069,1.50e-09,3;CL:0002632,1.50e-09,3;CL:0002368,1.50e-09,3;CL:0000307,1.50e-09,3;CL:0000377,1.50e-09,3;CL:0002321,2.63e-09,70;CL:0002453,5.06e-08,8;CL:0002614,5.29e-08,3;CL:0000223,8.89e-08,20;CL:0000066,1.94e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!1.99e-09!269;UBERON:0002020!1.33e-08!34;UBERON:0000480!8.31e-08!308;UBERON:0000467!8.31e-08!308;UBERON:0000025!1.89e-07!114;UBERON:0001049!2.12e-07!52;UBERON:0005068!2.12e-07!52;UBERON:0006241!2.12e-07!52;UBERON:0007135!2.12e-07!52;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0002791!2.16e-07!29;UBERON:0003528!2.16e-07!29;UBERON:0001893!2.16e-07!29;UBERON:0002619!2.16e-07!17;UBERON:0001017!2.40e-07!73;UBERON:0005743!2.40e-07!73;UBERON:0002616!2.41e-07!49;UBERON:0000955!5.37e-07!50;UBERON:0006238!5.37e-07!50;UBERON:0000073!8.28e-07!75;UBERON:0001016!8.28e-07!75;UBERON:0004111!8.54e-07!122;UBERON:0004121!9.85e-07!102;UBERON:0000924!9.85e-07!102;UBERON:0006601!9.85e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.50e-09,3;UBERON:0001005,1.50e-09,3;UBERON:0007196,1.50e-09,3;UBERON:0001558,1.50e-09,3;UBERON:0002038,5.29e-08,3;UBERON:0009663,5.29e-08,3;UBERON:0009661,5.29e-08,3;UBERON:0000125,5.29e-08,3;UBERON:0002308,5.29e-08,3|phase1_expression=0,0,0.909998478779072,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.19984845586813,1.60586496747019,0,0,0.861884930743556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.09012578190223,0.878744730937887,3.4997381833371,0.55994568650145,5.75010257459886,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,1.0165335962074,0,0,0,0,2.39680088414724,4.61061966385865,0,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.893811366596314,0.46081959976873,0.131886287730194,0.182975287204819,0,1.95428099300967,1.68828783009504,1.98637722109853,0.589257170947335,0.284743361598206,0,0,0,5.79728977403356,9.46466264679525,9.51959867190851,2.15881276655127,3.89865850468601,3.58421509677868,0.421333260395256,0,0,0,1.97180787687353,0,0,0,22.2985772241551,18.2419103142071,22.7486000256652,0.79928715803342,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,0,0.695297280769106,0.255715457330331,0.41557608911912,0.162241263067758,0,0.373220911830279,9.60346482047964,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0.584799949701329,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,5.75072826109418,0.372140947668503,0,1.01031551178845,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.851640511249612,0,0,0.164970122972535,0,0,0.302323556964751,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,0,1.06949213515416,0.948110273807448,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,2.86401185404534,0,0.406638934253697,0.432021363287205,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0,0,0.165458490457098,0,0.258319646955462,0.506868376472335,0.704143431874524,0.39061315453185,1.04859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0,1.6942555278512,0.460325236507177,0.572895513439397,0.343706364687375,2.05524755931193,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p@chr14:66598681..66598692,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=290 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:66598681..66598692,+ | |||
|id=chr14:66598681..66598692,+ | |||
|ontology_enrichment_celltype=CL:0002453!5.45e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.02e-13,5;CL:0000068,1.50e-09,3;CL:0002202,1.50e-09,3;CL:0000069,1.50e-09,3;CL:0002632,1.50e-09,3;CL:0002368,1.50e-09,3;CL:0000307,1.50e-09,3;CL:0000377,1.50e-09,3;CL:0002321,2.63e-09,70;CL:0002453,5.06e-08,8;CL:0002614,5.29e-08,3;CL:0000223,8.89e-08,20;CL:0000066,1.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.99e-09!269;UBERON:0002020!1.33e-08!34;UBERON:0000480!8.31e-08!308;UBERON:0000467!8.31e-08!308;UBERON:0000025!1.89e-07!114;UBERON:0001049!2.12e-07!52;UBERON:0005068!2.12e-07!52;UBERON:0006241!2.12e-07!52;UBERON:0007135!2.12e-07!52;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0002791!2.16e-07!29;UBERON:0003528!2.16e-07!29;UBERON:0001893!2.16e-07!29;UBERON:0002619!2.16e-07!17;UBERON:0001017!2.40e-07!73;UBERON:0005743!2.40e-07!73;UBERON:0002616!2.41e-07!49;UBERON:0000955!5.37e-07!50;UBERON:0006238!5.37e-07!50;UBERON:0000073!8.28e-07!75;UBERON:0001016!8.28e-07!75;UBERON:0004111!8.54e-07!122;UBERON:0004121!9.85e-07!102;UBERON:0000924!9.85e-07!102;UBERON:0006601!9.85e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.50e-09,3;UBERON:0001005,1.50e-09,3;UBERON:0007196,1.50e-09,3;UBERON:0001558,1.50e-09,3;UBERON:0002038,5.29e-08,3;UBERON:0009663,5.29e-08,3;UBERON:0009661,5.29e-08,3;UBERON:0000125,5.29e-08,3;UBERON:0002308,5.29e-08,3 | |||
|phase1_expression=0,0,0.909998478779072,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.19984845586813,1.60586496747019,0,0,0.861884930743556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.09012578190223,0.878744730937887,3.4997381833371,0.55994568650145,5.75010257459886,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,1.0165335962074,0,0,0,0,2.39680088414724,4.61061966385865,0,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.893811366596314,0.46081959976873,0.131886287730194,0.182975287204819,0,1.95428099300967,1.68828783009504,1.98637722109853,0.589257170947335,0.284743361598206,0,0,0,5.79728977403356,9.46466264679525,9.51959867190851,2.15881276655127,3.89865850468601,3.58421509677868,0.421333260395256,0,0,0,1.97180787687353,0,0,0,22.2985772241551,18.2419103142071,22.7486000256652,0.79928715803342,0.776813650941515,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0.457500602818626,0,0.695297280769106,0.255715457330331,0.41557608911912,0.162241263067758,0,0.373220911830279,9.60346482047964,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0.584799949701329,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,5.75072826109418,0.372140947668503,0,1.01031551178845,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.851640511249612,0,0,0.164970122972535,0,0,0.302323556964751,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,0,1.06949213515416,0.948110273807448,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,2.86401185404534,0,0.406638934253697,0.432021363287205,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0,0,0.165458490457098,0,0.258319646955462,0.506868376472335,0.704143431874524,0.39061315453185,1.04859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0,1.6942555278512,0.460325236507177,0.572895513439397,0.343706364687375,2.05524755931193,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr14:66598681..66598692,+ | |||
}} |
Revision as of 02:49, 13 September 2013
Short description: | p@chr14:66598681..66598692, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66598681..66598692, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.02e-13 | 5 |
duct epithelial cell | 1.50e-09 | 3 |
epithelial cell of tracheobronchial tree | 1.50e-09 | 3 |
branched duct epithelial cell | 1.50e-09 | 3 |
epithelial cell of lower respiratory tract | 1.50e-09 | 3 |
respiratory epithelial cell | 1.50e-09 | 3 |
tracheal epithelial cell | 1.50e-09 | 3 |
tracheoblast | 1.50e-09 | 3 |
embryonic cell | 2.63e-09 | 70 |
oligodendrocyte precursor cell | 5.06e-08 | 8 |
neuron of the substantia nigra | 5.29e-08 | 3 |
endodermal cell | 8.89e-08 | 20 |
epithelial cell | 1.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.50e-09 | 3 |
respiratory airway | 1.50e-09 | 3 |
tracheobronchial tree | 1.50e-09 | 3 |
lower respiratory tract | 1.50e-09 | 3 |
substantia nigra | 5.29e-08 | 3 |
telencephalic nucleus | 5.29e-08 | 3 |
midbrain nucleus | 5.29e-08 | 3 |
neural nucleus | 5.29e-08 | 3 |
nucleus of brain | 5.29e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.