Personal tools

FFCP PHASE1:Mm9::chr14:70577475..70577503,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=213019|HGNC=|MCL_coexpression_id=12|UniProt=Q8R1G6|association_with_transcript=0bp_to_ENSMUST00000022681,NM_145978,uc007uni.1_5end|description=CAGE_peak_3_at_Pdlim2_5end|id=chr14:70577475..70577503,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,9.23e-08,6;CL:0000677,9.23e-08,6;CL:0000584,9.23e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.00e-10!59;UBERON:0000344!2.00e-10!15;UBERON:0001242!5.07e-09!13;UBERON:0000060!5.07e-09!13;UBERON:0001262!5.07e-09!13;UBERON:0004786!5.07e-09!13;UBERON:0001007!7.67e-09!128;UBERON:0001555!7.67e-09!128;UBERON:0007026!7.67e-09!128;UBERON:0004119!8.72e-09!130;UBERON:0000925!8.72e-09!130;UBERON:0006595!8.72e-09!130;UBERON:0004923!3.34e-08!24;UBERON:0000160!3.87e-08!43;UBERON:0004921!5.56e-08!126;UBERON:0004185!5.56e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.84e-17,47;UBERON:0000160,4.85e-16,31;UBERON:0000344,1.36e-11,15;UBERON:0001007,9.10e-10,116;UBERON:0001555,9.10e-10,116;UBERON:0007026,9.10e-10,116;UBERON:0001242,1.08e-09,13;UBERON:0001262,1.08e-09,13;UBERON:0004786,1.08e-09,13;UBERON:0004119,2.36e-09,118;UBERON:0000925,2.36e-09,118;UBERON:0006595,2.36e-09,118;UBERON:0004921,1.14e-08,114|phase1_expression=0.160148847104794,195.426228278042,174.264708686192,86.8072286450602,95.6710844197523,14.2697381125106,13.0823078733494,0,2.25261955442667,4.21316147379588,0.856089841127525,0.717949430958028,0,0,0.333109761815663,0.607425802169478,0,2.20823515750766,3.29074640653773,3.39511721438424,0.595303031057488,0,0,46.8777798784682,47.0289026187699,135.518743531145,100.367545105064,85.7575506089838,73.5390633296167,55.4466285471848,79.8229838359097,0,0,0,0.288851619751275,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0.14084341977668,0,0,0,8.65964164044856,6.58735650235256,6.0662933401774,13.0169622879728,0.258937883647172,0,0,0,0.461230994512117,0,0,0,9.39340877390621,0,0,0,0,0,48.4618579167118,0,0,67.1852055198595,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.631325567659422,0,0,0.360124259610698,0.90422890701429,0.0680364991513279,0,0,0,0,0,0,0,1.11218899690239,14.2783388274088,17.6972637310831,0,0,0,0,0,0,0,0,0,0.617068451549513,0,0,0,0,0,0,0,0,0,0,0,78.6396703501439,45.2210468994661,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,47.4529061544512,12.5171205590248,5.7807098024062,6.36660710531683,9.16331209459865,52.1315257019448,35.4466401794499,34.0531577264968,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,6.28160846566456,0,0.325929952884052,0.509235257325564,0.469380496577004,2.68010011906905,7.14130922658041,10.7323506321789,0.630540576424764,1.7717175171902,1.91345722388985,6.22680595919804,3.10832967358612,7.37710198765709,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0,0,4.65170927702798,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.63549621259146,0,17.4779428117969,12.5942252822806,11.6403945111341,16.8315005044422,19.6969079694074,32.9373345391731,0,0.341741761595705,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,11.4560474161814,0,0,2.80813886136683,10.245326504709,18.1240927909327,12.1377911746339,5.95104881222419,17.53764811293,54.1790588359694,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.116876902181569,77.5417911964023,0,0,0,0.579568782096571,0,2.38097111547445,58.736935867664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.628839487883947,1.83843508450014,1.33348036680969,0.824140228955577,0.962757628775446,2.77966932940177,2.78827229879264,1.32038438970253,1.21733959710847,1.6646539625266,1.37845125493472,3.33405583898152,1.15884325944855,0.578727661391115,2.47251540481984,1.03039244094078,1.02860775715625,1.24233064311536,0.476872379894642,1.59881058295561,1.59985946706062,1.4384483341585,1.28049581010941,1.31534855718921,1.35804113845862,0.561142271657738,1.77952527186261,0.886540341380071,2.45538625901814,1.39443157067369,7.33045121728337,9.49280196164194,6.55008503647143,5.15690529715916,0.956441660344217,0.661774257358546,0.463735671240843|short_description=p3@Pdlim2}}
|EntrezGene=213019
|HGNC=
|MCL_coexpression_id=12
|UniProt=Q8R1G6
|association_with_transcript=0bp_to_ENSMUST00000022681,NM_145978,uc007uni.1_5end
|description=CAGE_peak_3_at_Pdlim2_5end
|id=chr14:70577475..70577503,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,9.23e-08,6;CL:0000677,9.23e-08,6;CL:0000584,9.23e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.00e-10!59;UBERON:0000344!2.00e-10!15;UBERON:0001242!5.07e-09!13;UBERON:0000060!5.07e-09!13;UBERON:0001262!5.07e-09!13;UBERON:0004786!5.07e-09!13;UBERON:0001007!7.67e-09!128;UBERON:0001555!7.67e-09!128;UBERON:0007026!7.67e-09!128;UBERON:0004119!8.72e-09!130;UBERON:0000925!8.72e-09!130;UBERON:0006595!8.72e-09!130;UBERON:0004923!3.34e-08!24;UBERON:0000160!3.87e-08!43;UBERON:0004921!5.56e-08!126;UBERON:0004185!5.56e-08!126
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.84e-17,47;UBERON:0000160,4.85e-16,31;UBERON:0000344,1.36e-11,15;UBERON:0001007,9.10e-10,116;UBERON:0001555,9.10e-10,116;UBERON:0007026,9.10e-10,116;UBERON:0001242,1.08e-09,13;UBERON:0001262,1.08e-09,13;UBERON:0004786,1.08e-09,13;UBERON:0004119,2.36e-09,118;UBERON:0000925,2.36e-09,118;UBERON:0006595,2.36e-09,118;UBERON:0004921,1.14e-08,114
|phase1_expression=0.160148847104794,195.426228278042,174.264708686192,86.8072286450602,95.6710844197523,14.2697381125106,13.0823078733494,0,2.25261955442667,4.21316147379588,0.856089841127525,0.717949430958028,0,0,0.333109761815663,0.607425802169478,0,2.20823515750766,3.29074640653773,3.39511721438424,0.595303031057488,0,0,46.8777798784682,47.0289026187699,135.518743531145,100.367545105064,85.7575506089838,73.5390633296167,55.4466285471848,79.8229838359097,0,0,0,0.288851619751275,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0.14084341977668,0,0,0,8.65964164044856,6.58735650235256,6.0662933401774,13.0169622879728,0.258937883647172,0,0,0,0.461230994512117,0,0,0,9.39340877390621,0,0,0,0,0,48.4618579167118,0,0,67.1852055198595,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.631325567659422,0,0,0.360124259610698,0.90422890701429,0.0680364991513279,0,0,0,0,0,0,0,1.11218899690239,14.2783388274088,17.6972637310831,0,0,0,0,0,0,0,0,0,0.617068451549513,0,0,0,0,0,0,0,0,0,0,0,78.6396703501439,45.2210468994661,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,47.4529061544512,12.5171205590248,5.7807098024062,6.36660710531683,9.16331209459865,52.1315257019448,35.4466401794499,34.0531577264968,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,6.28160846566456,0,0.325929952884052,0.509235257325564,0.469380496577004,2.68010011906905,7.14130922658041,10.7323506321789,0.630540576424764,1.7717175171902,1.91345722388985,6.22680595919804,3.10832967358612,7.37710198765709,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0,0,4.65170927702798,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.63549621259146,0,17.4779428117969,12.5942252822806,11.6403945111341,16.8315005044422,19.6969079694074,32.9373345391731,0,0.341741761595705,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,11.4560474161814,0,0,2.80813886136683,10.245326504709,18.1240927909327,12.1377911746339,5.95104881222419,17.53764811293,54.1790588359694,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.116876902181569,77.5417911964023,0,0,0,0.579568782096571,0,2.38097111547445,58.736935867664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.628839487883947,1.83843508450014,1.33348036680969,0.824140228955577,0.962757628775446,2.77966932940177,2.78827229879264,1.32038438970253,1.21733959710847,1.6646539625266,1.37845125493472,3.33405583898152,1.15884325944855,0.578727661391115,2.47251540481984,1.03039244094078,1.02860775715625,1.24233064311536,0.476872379894642,1.59881058295561,1.59985946706062,1.4384483341585,1.28049581010941,1.31534855718921,1.35804113845862,0.561142271657738,1.77952527186261,0.886540341380071,2.45538625901814,1.39443157067369,7.33045121728337,9.49280196164194,6.55008503647143,5.15690529715916,0.956441660344217,0.661774257358546,0.463735671240843
|short_description=p3@Pdlim2
}}

Revision as of 02:58, 13 September 2013

Short description:p3@Pdlim2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pdlim2_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000022681, NM_145978, uc007uni.1_5end
EntrezGene:Pdlim2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pdlim2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5195.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6174.26
CD326+ enterocyte, pool1.CNhs13542.11848-124I386.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I495.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D247.03
GP2+ M cell, pool1.CNhs13228.11845-124H9135.52
GP2+ M cell, pool2.CNhs13231.11846-124I1100.37
GP2+ M cell, pool3.CNhs13240.11847-124I285.76
Ileum epithelium, pool1.CNhs13199.10252-104B973.54
Ileum epithelium, pool2.CNhs13232.10253-104C155.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C879.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H767.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B517.70
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I378.64
intestine, adult.CNhs10496.178-9A345.22
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D147.45
intestine, neonate N01.CNhs11192.1322-23E912.52
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E335.45
intestine, neonate N30.CNhs11131.1384-42G134.05
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C317.48
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H311.64
skin, neonate N06.CNhs11097.693-20I516.83
skin, neonate N10.CNhs11108.762-6C419.70
small intestine, neonate N16.CNhs11114.790-21I132.94
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C618.12
stomach, neonate N03.CNhs11193.1340-24B812.14
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E417.54
stomach, neonate N30.CNhs11134.1386-42I154.18
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B477.54
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D558.74
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell9.23e-086
gut absorptive cell9.23e-086
enterocyte9.23e-086

Uber anatomy
Ontology termp-valuen
gastrointestinal system9.84e-1747
intestine4.85e-1631
mucosa1.36e-1115
digestive system9.10e-10116
digestive tract9.10e-10116
primitive gut9.10e-10116
intestinal mucosa1.08e-0913
wall of intestine1.08e-0913
gastrointestinal system mucosa1.08e-0913
endoderm-derived structure2.36e-09118
endoderm2.36e-09118
presumptive endoderm2.36e-09118
subdivision of digestive tract1.14e-08114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:70577475..70577503,-&oldid=2922197"