FFCP PHASE1:Mm9::chr14:70592626..70592638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70592626..70592638,-|id=chr14:70592626..70592638,-|ontology_enrichment_celltype=CL:0002453!1.76e-22!8;CL:0000333!8.44e-18!10;CL:0000095!8.44e-18!10;CL:0000243!8.44e-18!10;CL:0000123!8.44e-18!10;CL:0000125!8.44e-18!10;CL:0000030!8.44e-18!10;CL:0000339!8.44e-18!10;CL:0000128!7.12e-16!6;CL:0000126!7.12e-16!6;CL:0000127!7.12e-16!6;CL:0002604!9.06e-09!2;CL:0002605!9.06e-09!2;CL:0000864!2.46e-08!2;CL:0000878!2.46e-08!2;CL:0000129!2.46e-08!2|ontology_enrichment_celltype_v019_2=CL:0002453,6.49e-56,8;CL:0000128,3.23e-52,6;CL:0000126,3.23e-52,6;CL:0000127,3.23e-52,6;CL:0000333,7.62e-45,10;CL:0000095,7.62e-45,10;CL:0000243,7.62e-45,10;CL:0000123,7.62e-45,10;CL:0000125,7.62e-45,10;CL:0000030,7.62e-45,10;CL:0000339,7.62e-45,10;CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0002319,1.11e-10,43;CL:0000221,1.92e-10,44;CL:0000133,1.92e-10,44;CL:0000219,1.54e-08,54;CL:0002603,1.32e-07,2;CL:0000878,2.35e-07,2;CL:0000129,2.35e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0001987,1.52e-07,2;UBERON:0003124,1.52e-07,2;UBERON:0004340,1.52e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,9.88587822305123,22.5538682926169,1.81982348112971,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33015277950202,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr14:70592626..70592638,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:70592626..70592638,- | |||
|id=chr14:70592626..70592638,- | |||
|ontology_enrichment_celltype=CL:0002453!1.76e-22!8;CL:0000333!8.44e-18!10;CL:0000095!8.44e-18!10;CL:0000243!8.44e-18!10;CL:0000123!8.44e-18!10;CL:0000125!8.44e-18!10;CL:0000030!8.44e-18!10;CL:0000339!8.44e-18!10;CL:0000128!7.12e-16!6;CL:0000126!7.12e-16!6;CL:0000127!7.12e-16!6;CL:0002604!9.06e-09!2;CL:0002605!9.06e-09!2;CL:0000864!2.46e-08!2;CL:0000878!2.46e-08!2;CL:0000129!2.46e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.49e-56,8;CL:0000128,3.23e-52,6;CL:0000126,3.23e-52,6;CL:0000127,3.23e-52,6;CL:0000333,7.62e-45,10;CL:0000095,7.62e-45,10;CL:0000243,7.62e-45,10;CL:0000123,7.62e-45,10;CL:0000125,7.62e-45,10;CL:0000030,7.62e-45,10;CL:0000339,7.62e-45,10;CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0002319,1.11e-10,43;CL:0000221,1.92e-10,44;CL:0000133,1.92e-10,44;CL:0000219,1.54e-08,54;CL:0002603,1.32e-07,2;CL:0000878,2.35e-07,2;CL:0000129,2.35e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0001987,1.52e-07,2;UBERON:0003124,1.52e-07,2;UBERON:0004340,1.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,9.88587822305123,22.5538682926169,1.81982348112971,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33015277950202,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr14:70592626..70592638,- | |||
}} |
Revision as of 02:58, 13 September 2013
Short description: | p@chr14:70592626..70592638, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70592626..70592638, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.49e-56 | 8 |
oligodendrocyte | 3.23e-52 | 6 |
macroglial cell | 3.23e-52 | 6 |
astrocyte | 3.23e-52 | 6 |
migratory neural crest cell | 7.62e-45 | 10 |
neuron associated cell | 7.62e-45 | 10 |
glial cell (sensu Vertebrata) | 7.62e-45 | 10 |
neuron associated cell (sensu Vertebrata) | 7.62e-45 | 10 |
glial cell | 7.62e-45 | 10 |
glioblast | 7.62e-45 | 10 |
glioblast (sensu Vertebrata) | 7.62e-45 | 10 |
astrocyte of the cerebral cortex | 1.78e-26 | 2 |
astrocyte of the hippocampus | 1.78e-26 | 2 |
neural cell | 1.11e-10 | 43 |
ectodermal cell | 1.92e-10 | 44 |
neurectodermal cell | 1.92e-10 | 44 |
motile cell | 1.54e-08 | 54 |
astrocyte of the cerebellum | 1.32e-07 | 2 |
central nervous system macrophage | 2.35e-07 | 2 |
microglial cell | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.72e-08 | 7 |
lobe parts of cerebral cortex | 2.72e-08 | 7 |
hippocampal formation | 2.72e-08 | 7 |
limbic system | 2.72e-08 | 7 |
limbic lobe | 2.72e-08 | 7 |
placenta | 1.52e-07 | 2 |
chorion | 1.52e-07 | 2 |
allantois | 1.52e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.