FFCP PHASE1:Hg19::chr4:186733119..186733132,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=C9JN77|association_with_transcript=0bp_to_ENST00000419063_5end|coexpression_cluster_id=C56|description=CAGE_peak_7_at_SORBS2_5end|id=chr4:186733119..186733132,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002586,9.28e-07,3|ontology_enrichment_development_v019=UBERON:0005062;4.36e-11;4!UBERON:0007284;4.36e-11;4!UBERON:0004872;5.77e-10;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.84e-10;2|ontology_enrichment_disease_v019_2=DOID:114,1.84e-10,2|ontology_enrichment_uberon=UBERON:0007023!7.84e-30!115;UBERON:0003075!6.91e-22!86;UBERON:0007284!6.91e-22!86;UBERON:0002346!3.38e-20!90;UBERON:0005743!9.78e-19!86;UBERON:0003056!2.60e-17!61;UBERON:0000073!2.40e-16!94;UBERON:0001016!2.40e-16!94;UBERON:0002616!1.07e-15!59;UBERON:0000153!1.41e-15!129;UBERON:0007811!1.41e-15!129;UBERON:0001017!1.41e-15!82;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0001049!2.19e-15!57;UBERON:0005068!2.19e-15!57;UBERON:0006241!2.19e-15!57;UBERON:0007135!2.19e-15!57;UBERON:0003080!5.91e-15!42;UBERON:0000033!1.29e-14!123;UBERON:0000955!1.38e-14!69;UBERON:0006238!1.38e-14!69;UBERON:0000477!6.35e-14!286;UBERON:0000481!8.13e-14!347;UBERON:0004121!2.54e-13!169;UBERON:0000062!1.30e-12!511;UBERON:0000924!1.37e-12!173;UBERON:0006601!1.37e-12!173;UBERON:0001869!1.68e-11!32;UBERON:0001893!1.96e-11!34;UBERON:0004111!4.68e-11!241;UBERON:0000119!8.46e-11!312;UBERON:0001950!9.43e-11!20;UBERON:0000483!9.61e-11!309;UBERON:0002791!1.10e-10!33;UBERON:0000025!1.76e-10!194;UBERON:0000956!4.08e-10!25;UBERON:0000203!4.08e-10!25;UBERON:0000475!1.96e-09!365;UBERON:0000468!1.99e-09!659;UBERON:0002619!2.04e-09!22;UBERON:0000467!2.23e-09!625;UBERON:0002020!2.68e-09!34;UBERON:0003528!2.68e-09!34;UBERON:0000480!2.68e-09!626;UBERON:0000922!3.72e-09!612;UBERON:0000923!2.00e-08!604;UBERON:0005291!2.00e-08!604;UBERON:0006598!2.00e-08!604;UBERON:0002532!2.00e-08!604;UBERON:0002050!2.38e-08!605;UBERON:0005423!2.38e-08!605;UBERON:0007100!2.13e-07!27;UBERON:0001048!3.69e-07!168;UBERON:0002368!5.11e-07!35;UBERON:0002530!7.23e-07!59|ontology_enrichment_uberon_v019=UBERON:0007100;6.24e-24;25!UBERON:0000948;3.22e-15;22!UBERON:0003978;1.23e-14;3!UBERON:0000946;1.23e-14;3!UBERON:0004151;1.38e-14;3!UBERON:0002133;3.02e-10;2!UBERON:0002081;3.16e-10;2!UBERON:0000966;2.68e-08;5!UBERON:0005388;2.68e-08;5!UBERON:0001802;2.68e-08;5!UBERON:0003103;1.68e-07;61!UBERON:0000970;4.38e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.54e-22,27;UBERON:0003978,1.24e-14,3;UBERON:0009751,1.24e-14,3;UBERON:0000946,1.24e-14,3;UBERON:0002523,1.24e-14,3;UBERON:0005983,1.24e-14,3;UBERON:0002165,1.24e-14,3;UBERON:0002062,1.24e-14,3;UBERON:0007280,1.24e-14,3;UBERON:0004151,1.35e-14,3;UBERON:0007023,1.43e-14,114;UBERON:0000948,8.97e-14,24;UBERON:0005498,8.97e-14,24;UBERON:0004140,8.97e-14,24;UBERON:0009881,8.97e-14,24;UBERON:0004141,8.97e-14,24;UBERON:0003084,8.97e-14,24;UBERON:0007005,8.97e-14,24;UBERON:0004139,8.97e-14,24;UBERON:0004291,8.97e-14,24;UBERON:0003103,1.73e-11,68;UBERON:0002133,3.03e-10,2;UBERON:0002081,3.17e-10,2;UBERON:0010227,3.17e-10,2;UBERON:0001048,6.14e-10,160;UBERON:0010314,1.99e-08,132;UBERON:0000966,3.97e-07,6;UBERON:0005388,3.97e-07,6;UBERON:0001802,3.97e-07,6;UBERON:0000970,8.78e-07,21;UBERON:0002104,8.78e-07,21;UBERON:0001782,9.28e-07,3;UBERON:0005424,9.28e-07,3|phase1_expression=0.181678379270557,0,0.986680828671798,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.738726348460727,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07824189089065,0,0,0.144846518960824,0,0,1.89069634328136,0.665188192387692,0.614843499851882,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,2.24271040056923,0,1.2333377420858,0.933633106199299,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,0,2.36315962672562,0,0.614942192715568,0,0,0,0,0,0,0,0,2.31860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.768834895534206,0.511707249066704,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,2.952131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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt=C9JN77 | |||
|association_with_transcript=0bp_to_ENST00000419063_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_7_at_SORBS2_5end | |||
|id=chr4:186733119..186733132,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,9.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.36e-11;4!UBERON:0007284;4.36e-11;4!UBERON:0004872;5.77e-10;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.84e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.84e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-30!115;UBERON:0003075!6.91e-22!86;UBERON:0007284!6.91e-22!86;UBERON:0002346!3.38e-20!90;UBERON:0005743!9.78e-19!86;UBERON:0003056!2.60e-17!61;UBERON:0000073!2.40e-16!94;UBERON:0001016!2.40e-16!94;UBERON:0002616!1.07e-15!59;UBERON:0000153!1.41e-15!129;UBERON:0007811!1.41e-15!129;UBERON:0001017!1.41e-15!82;UBERON:0002780!1.58e-15!41;UBERON:0001890!1.58e-15!41;UBERON:0006240!1.58e-15!41;UBERON:0001049!2.19e-15!57;UBERON:0005068!2.19e-15!57;UBERON:0006241!2.19e-15!57;UBERON:0007135!2.19e-15!57;UBERON:0003080!5.91e-15!42;UBERON:0000033!1.29e-14!123;UBERON:0000955!1.38e-14!69;UBERON:0006238!1.38e-14!69;UBERON:0000477!6.35e-14!286;UBERON:0000481!8.13e-14!347;UBERON:0004121!2.54e-13!169;UBERON:0000062!1.30e-12!511;UBERON:0000924!1.37e-12!173;UBERON:0006601!1.37e-12!173;UBERON:0001869!1.68e-11!32;UBERON:0001893!1.96e-11!34;UBERON:0004111!4.68e-11!241;UBERON:0000119!8.46e-11!312;UBERON:0001950!9.43e-11!20;UBERON:0000483!9.61e-11!309;UBERON:0002791!1.10e-10!33;UBERON:0000025!1.76e-10!194;UBERON:0000956!4.08e-10!25;UBERON:0000203!4.08e-10!25;UBERON:0000475!1.96e-09!365;UBERON:0000468!1.99e-09!659;UBERON:0002619!2.04e-09!22;UBERON:0000467!2.23e-09!625;UBERON:0002020!2.68e-09!34;UBERON:0003528!2.68e-09!34;UBERON:0000480!2.68e-09!626;UBERON:0000922!3.72e-09!612;UBERON:0000923!2.00e-08!604;UBERON:0005291!2.00e-08!604;UBERON:0006598!2.00e-08!604;UBERON:0002532!2.00e-08!604;UBERON:0002050!2.38e-08!605;UBERON:0005423!2.38e-08!605;UBERON:0007100!2.13e-07!27;UBERON:0001048!3.69e-07!168;UBERON:0002368!5.11e-07!35;UBERON:0002530!7.23e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.24e-24;25!UBERON:0000948;3.22e-15;22!UBERON:0003978;1.23e-14;3!UBERON:0000946;1.23e-14;3!UBERON:0004151;1.38e-14;3!UBERON:0002133;3.02e-10;2!UBERON:0002081;3.16e-10;2!UBERON:0000966;2.68e-08;5!UBERON:0005388;2.68e-08;5!UBERON:0001802;2.68e-08;5!UBERON:0003103;1.68e-07;61!UBERON:0000970;4.38e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.54e-22,27;UBERON:0003978,1.24e-14,3;UBERON:0009751,1.24e-14,3;UBERON:0000946,1.24e-14,3;UBERON:0002523,1.24e-14,3;UBERON:0005983,1.24e-14,3;UBERON:0002165,1.24e-14,3;UBERON:0002062,1.24e-14,3;UBERON:0007280,1.24e-14,3;UBERON:0004151,1.35e-14,3;UBERON:0007023,1.43e-14,114;UBERON:0000948,8.97e-14,24;UBERON:0005498,8.97e-14,24;UBERON:0004140,8.97e-14,24;UBERON:0009881,8.97e-14,24;UBERON:0004141,8.97e-14,24;UBERON:0003084,8.97e-14,24;UBERON:0007005,8.97e-14,24;UBERON:0004139,8.97e-14,24;UBERON:0004291,8.97e-14,24;UBERON:0003103,1.73e-11,68;UBERON:0002133,3.03e-10,2;UBERON:0002081,3.17e-10,2;UBERON:0010227,3.17e-10,2;UBERON:0001048,6.14e-10,160;UBERON:0010314,1.99e-08,132;UBERON:0000966,3.97e-07,6;UBERON:0005388,3.97e-07,6;UBERON:0001802,3.97e-07,6;UBERON:0000970,8.78e-07,21;UBERON:0002104,8.78e-07,21;UBERON:0001782,9.28e-07,3;UBERON:0005424,9.28e-07,3 | |||
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|short_description=p7@SORBS2 | |||
}} |
Revision as of 10:21, 13 September 2013
Short description: | p7@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SORBS2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000419063_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9JN77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 9.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.54e-22 | 27 |
valve | 1.24e-14 | 3 |
cardiac mesenchyme | 1.24e-14 | 3 |
cardial valve | 1.24e-14 | 3 |
tunica intima | 1.24e-14 | 3 |
heart layer | 1.24e-14 | 3 |
endocardium | 1.24e-14 | 3 |
endocardial cushion | 1.24e-14 | 3 |
presumptive endocardium | 1.24e-14 | 3 |
cardiac chamber | 1.35e-14 | 3 |
adult organism | 1.43e-14 | 114 |
heart | 8.97e-14 | 24 |
primitive heart tube | 8.97e-14 | 24 |
primary heart field | 8.97e-14 | 24 |
anterior lateral plate mesoderm | 8.97e-14 | 24 |
heart tube | 8.97e-14 | 24 |
heart primordium | 8.97e-14 | 24 |
cardiac mesoderm | 8.97e-14 | 24 |
cardiogenic plate | 8.97e-14 | 24 |
heart rudiment | 8.97e-14 | 24 |
compound organ | 1.73e-11 | 68 |
atrioventricular valve | 3.03e-10 | 2 |
cardiac atrium | 3.17e-10 | 2 |
future cardiac atrium | 3.17e-10 | 2 |
primordium | 6.14e-10 | 160 |
structure with developmental contribution from neural crest | 1.99e-08 | 132 |
retina | 3.97e-07 | 6 |
photoreceptor array | 3.97e-07 | 6 |
posterior segment of eyeball | 3.97e-07 | 6 |
eye | 8.78e-07 | 21 |
visual system | 8.78e-07 | 21 |
pigmented layer of retina | 9.28e-07 | 3 |
presumptive retinal pigmented epithelium | 9.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.84e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.