FFCP PHASE1:Mm9::chr15:57966602..57966650,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70472|HGNC=|MCL_coexpression_id=49|UniProt=G3X963,Q6IQY4,Q8CDM1|association_with_transcript=0bp_to_ENSMUST00000038194,NM_027435,uc007vtf.1,uc007vth.1_5end|description=CAGE_peak_1_at_Atad2_5end|id=chr15:57966602..57966650,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.06e-07!29;UBERON:0001048!8.00e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.06e-07,29;UBERON:0005057,1.06e-07,29;UBERON:0001048,5.70e-07,134|phase1_expression=15.534438169165,1.39590163055744,3.63999391511629,2.41971369045464,3.00537437967808,29.7146311284045,20.5579123724063,33.9594340651346,41.39188431259,33.9393563166891,8.56089841127525,5.82336760665956,38.8625656943837,32.25812849261,128.580368060846,147.199519392403,158.800546335089,25.3947043113381,31.8105485965314,32.6780031884483,10.8855411393369,61.0639349885445,59.5535519236773,10.239515058778,12.3881011776272,6.31655160526522,5.59990595006797,10.3426191689227,10.0712412311878,17.8941392129551,14.1907526819395,90.8093863047273,54.7407660950267,31.6963362030877,54.5929561329909,54.8574329683025,57.9840971785128,42.6902263351646,56.2561448057136,55.4935168612226,27.6468799374577,29.3709558532132,29.6161315349004,21.9060463277504,19.1602400004883,14.5001934207728,12.5182615095686,9.15705656797875,2.19686182734472,3.30530828426282,8.39918529752175,7.18762821824858,22.3150866056789,102.2760620236,87.3843877770406,20.3234954468398,22.6361417551618,9.7977697532714,6.47412674750713,2.64495489636016,3.1691570175309,6.09920157724438,2.66788438833342,7.64914759689189,1.97773272513395,9.2362414942993,8.38880309451533,6.14749288514487,26.8556095878957,16.2007125998029,17.0363218694619,3.99911378165325,6.84692476950002,34.1749329809722,25.2073588777962,24.8189072384706,6.60695285996332,3.95830748064082,3.07213066512487,2.2420668914133,3.20206752608434,5.73004707612436,3.35019598801657,2.8138130501584,3.66715794664344,13.5529149317887,10.2507610175354,5.03278503728312,9.46577416664801,46.9299388263138,23.7688880735376,2.58127163094416,0.679971333707751,5.93673510801599,7.14754059192436,7.16843019355737,16.7128859956785,55.0489941927127,29.3558185201242,33.5672595784823,13.3801248787846,43.6310023208681,28.028576367731,21.3320010945999,38.3189142589849,32.9367825117628,33.8701378159905,12.4460428893775,45.5730675219022,9.20341262201914,52.7395393369053,44.1474943552605,38.2821725445057,33.158980921577,23.1649753057338,17.5933227861546,3.95511948374998,10.4111536982336,102.614824026185,43.8388163357479,67.5775046488804,80.9741672735821,13.0474232852686,10.5401086924157,4.1889341362691,15.5828803677241,71.7692595790462,31.7948447426506,44.6016497026457,4.19413790333504,5.49000723382352,7.91622418311046,6.95297280769106,6.90431734791892,3.32460871295296,3.73154905055843,45.4203562772411,47.5234627730555,6.06534620240819,5.26104639716185,78.0722657776222,54.4867987507331,58.3401300569331,59.226993409436,65.8593311784854,63.92874642214,46.663458830745,8.53721123438752,65.532669851584,77.1552807084703,51.729630504201,49.3190397962043,55.0533553466684,47.7105468135368,48.3588020558667,76.8272269919384,44.941643988047,37.058098624519,54.5593918839538,56.7524616747275,56.2862543954631,48.796818655935,61.0801417809842,55.2907491210205,48.4398734466368,38.8331687733181,41.0458304141417,18.7992201211143,34.8866881816579,17.5659186564632,11.8360461936949,6.43279944671462,13.3925570327541,10.3338942445486,6.51898840548794,11.3195073617213,6.60837565967596,26.9739577996815,79.5565174496423,74.3157349953403,69.3306941912862,49.0090964834722,42.91896246206,33.8601614480355,21.353807769503,14.822905925161,21.8661631656234,27.8539060857611,27.1000081095577,26.9645822596266,22.9106332867176,19.3167035056736,36.6059048839448,75.1755212972016,60.8621772634634,65.1684249105006,42.2816422025424,25.1787593406244,29.0888070771584,8.85660887877613,12.55989822731,7.89741849099523,6.81841042300442,105.112416601139,107.124652336696,97.3652946626417,132.467659266692,92.6120293449281,70.0221092398904,66.1701116136864,45.72213395056,55.4614054639925,77.6348315247715,34.2369671855023,28.395428253425,29.5517287198121,24.577445652502,5.78932225636041,13.3022296919955,78.0704616494397,78.0602237157304,87.9279544315474,82.1415869009757,59.2972151344028,28.0891496245496,10.5372169843211,49.8127055375564,36.7631384816966,26.4694915971429,15.8947415274266,19.858772914578,14.7542039753142,18.0949540727127,20.1245103012923,18.1952781017043,11.313406598494,5.29816946959713,3.28192722458169,41.9673460164289,7.82659874333556,69.7273164909927,67.5459027633185,73.4593786268844,68.1061074164773,45.4509295128084,43.3107092106914,83.7958152467031,50.560263418657,47.0392455756363,1.60660658210904,22.1426532924899,42.557679276474,46.097009497062,19.6314446337317,5.30980553359851,61.6662815833653,50.1857104561487,43.5677734236125,19.489924930131,35.3550420135517,15.5056975900933,48.71351974998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| ||
|EntrezGene=70472 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|UniProt=G3X963,Q6IQY4,Q8CDM1 | |||
|association_with_transcript=0bp_to_ENSMUST00000038194,NM_027435,uc007vtf.1,uc007vth.1_5end | |||
|description=CAGE_peak_1_at_Atad2_5end | |||
|id=chr15:57966602..57966650,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.06e-07!29;UBERON:0001048!8.00e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.06e-07,29;UBERON:0005057,1.06e-07,29;UBERON:0001048,5.70e-07,134 | |||
|phase1_expression=15.534438169165,1.39590163055744,3.63999391511629,2.41971369045464,3.00537437967808,29.7146311284045,20.5579123724063,33.9594340651346,41.39188431259,33.9393563166891,8.56089841127525,5.82336760665956,38.8625656943837,32.25812849261,128.580368060846,147.199519392403,158.800546335089,25.3947043113381,31.8105485965314,32.6780031884483,10.8855411393369,61.0639349885445,59.5535519236773,10.239515058778,12.3881011776272,6.31655160526522,5.59990595006797,10.3426191689227,10.0712412311878,17.8941392129551,14.1907526819395,90.8093863047273,54.7407660950267,31.6963362030877,54.5929561329909,54.8574329683025,57.9840971785128,42.6902263351646,56.2561448057136,55.4935168612226,27.6468799374577,29.3709558532132,29.6161315349004,21.9060463277504,19.1602400004883,14.5001934207728,12.5182615095686,9.15705656797875,2.19686182734472,3.30530828426282,8.39918529752175,7.18762821824858,22.3150866056789,102.2760620236,87.3843877770406,20.3234954468398,22.6361417551618,9.7977697532714,6.47412674750713,2.64495489636016,3.1691570175309,6.09920157724438,2.66788438833342,7.64914759689189,1.97773272513395,9.2362414942993,8.38880309451533,6.14749288514487,26.8556095878957,16.2007125998029,17.0363218694619,3.99911378165325,6.84692476950002,34.1749329809722,25.2073588777962,24.8189072384706,6.60695285996332,3.95830748064082,3.07213066512487,2.2420668914133,3.20206752608434,5.73004707612436,3.35019598801657,2.8138130501584,3.66715794664344,13.5529149317887,10.2507610175354,5.03278503728312,9.46577416664801,46.9299388263138,23.7688880735376,2.58127163094416,0.679971333707751,5.93673510801599,7.14754059192436,7.16843019355737,16.7128859956785,55.0489941927127,29.3558185201242,33.5672595784823,13.3801248787846,43.6310023208681,28.028576367731,21.3320010945999,38.3189142589849,32.9367825117628,33.8701378159905,12.4460428893775,45.5730675219022,9.20341262201914,52.7395393369053,44.1474943552605,38.2821725445057,33.158980921577,23.1649753057338,17.5933227861546,3.95511948374998,10.4111536982336,102.614824026185,43.8388163357479,67.5775046488804,80.9741672735821,13.0474232852686,10.5401086924157,4.1889341362691,15.5828803677241,71.7692595790462,31.7948447426506,44.6016497026457,4.19413790333504,5.49000723382352,7.91622418311046,6.95297280769106,6.90431734791892,3.32460871295296,3.73154905055843,45.4203562772411,47.5234627730555,6.06534620240819,5.26104639716185,78.0722657776222,54.4867987507331,58.3401300569331,59.226993409436,65.8593311784854,63.92874642214,46.663458830745,8.53721123438752,65.532669851584,77.1552807084703,51.729630504201,49.3190397962043,55.0533553466684,47.7105468135368,48.3588020558667,76.8272269919384,44.941643988047,37.058098624519,54.5593918839538,56.7524616747275,56.2862543954631,48.796818655935,61.0801417809842,55.2907491210205,48.4398734466368,38.8331687733181,41.0458304141417,18.7992201211143,34.8866881816579,17.5659186564632,11.8360461936949,6.43279944671462,13.3925570327541,10.3338942445486,6.51898840548794,11.3195073617213,6.60837565967596,26.9739577996815,79.5565174496423,74.3157349953403,69.3306941912862,49.0090964834722,42.91896246206,33.8601614480355,21.353807769503,14.822905925161,21.8661631656234,27.8539060857611,27.1000081095577,26.9645822596266,22.9106332867176,19.3167035056736,36.6059048839448,75.1755212972016,60.8621772634634,65.1684249105006,42.2816422025424,25.1787593406244,29.0888070771584,8.85660887877613,12.55989822731,7.89741849099523,6.81841042300442,105.112416601139,107.124652336696,97.3652946626417,132.467659266692,92.6120293449281,70.0221092398904,66.1701116136864,45.72213395056,55.4614054639925,77.6348315247715,34.2369671855023,28.395428253425,29.5517287198121,24.577445652502,5.78932225636041,13.3022296919955,78.0704616494397,78.0602237157304,87.9279544315474,82.1415869009757,59.2972151344028,28.0891496245496,10.5372169843211,49.8127055375564,36.7631384816966,26.4694915971429,15.8947415274266,19.858772914578,14.7542039753142,18.0949540727127,20.1245103012923,18.1952781017043,11.313406598494,5.29816946959713,3.28192722458169,41.9673460164289,7.82659874333556,69.7273164909927,67.5459027633185,73.4593786268844,68.1061074164773,45.4509295128084,43.3107092106914,83.7958152467031,50.560263418657,47.0392455756363,1.60660658210904,22.1426532924899,42.557679276474,46.097009497062,19.6314446337317,5.30980553359851,61.6662815833653,50.1857104561487,43.5677734236125,19.489924930131,35.3550420135517,15.5056975900933,48.7135197499857,47.0576539467832,31.9197125515174,21.0837217149998,27.8465966770104,4.76615448055303,57.7996111840506,21.9909762430683,32.3648922897704,32.0985822892515,30.5010678099541,26.8214903581457,9.43841342255258,27.4565898434541,8.89694697628045,7.05690873775878,26.2169142176953,32.454349765877,50.9644215642917,36.2891925769535,43.3331975326962,23.9014286036478,6.11903496634682,107.477784021849,67.4885058239738,90.560123883789,161.996873024034,197.933241740044,118.964650067392,63.401954387708,69.2759689002107,61.637188316773,6.68269432610579,81.1401823535612,72.3817302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| |||
|short_description=p1@Atad2 | |||
}} | |||
Revision as of 10:36, 13 September 2013
| Short description: | p1@Atad2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Atad2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:49 |
| Association with transcript: | 0bp_to_ENSMUST00000038194, NM_027435, uc007vtf.1, uc007vth.1_5end |
| EntrezGene: | Atad2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 1.06e-07 | 29 |
| immune organ | 1.06e-07 | 29 |
| primordium | 5.70e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
