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FFCP PHASE1:Mm9::chr15:67008386..67008403,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20442|HGNC=|MCL_coexpression_id=122|UniProt=P54751,Q544T4|association_with_transcript=40bp_to_NM_009177,uc007wba.1,uc007wbb.1_5end|description=CAGE_peak_3_at_St3gal1_5end|id=chr15:67008386..67008403,-|ontology_enrichment_celltype=CL:0000988!3.00e-07!32;CL:0002032!3.00e-07!32;CL:0000037!3.00e-07!32;CL:0000566!3.00e-07!32;CL:0000837!3.00e-07!32;CL:0002031!7.65e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,8.79e-08,25;CL:0000988,1.01e-07,32;CL:0002032,1.01e-07,32;CL:0000037,1.01e-07,32;CL:0000837,1.01e-07,32;CL:0000838,9.82e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.67e-12!45;UBERON:0003061!5.67e-12!45;UBERON:0002193!7.29e-11!48;UBERON:0004177!7.60e-10!29;UBERON:0002405!5.40e-08!70;UBERON:0002370!3.60e-07!23;UBERON:0000974!3.60e-07!23;UBERON:0004807!3.60e-07!23;UBERON:0005058!3.60e-07!23;UBERON:0003351!3.60e-07!23;UBERON:0009113!3.60e-07!23;UBERON:0003295!3.60e-07!23;UBERON:0009722!3.60e-07!23;UBERON:0005562!3.60e-07!23;UBERON:0007690!3.60e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.00e-13,45;UBERON:0003061,5.00e-13,45;UBERON:0002193,3.17e-12,48;UBERON:0002405,3.17e-12,48;UBERON:0004177,7.50e-11,29;UBERON:0005057,7.50e-11,29;UBERON:0002370,5.92e-08,23;UBERON:0000974,5.92e-08,23;UBERON:0004807,5.92e-08,23;UBERON:0005058,5.92e-08,23;UBERON:0003351,5.92e-08,23;UBERON:0009113,5.92e-08,23;UBERON:0003295,5.92e-08,23;UBERON:0009722,5.92e-08,23;UBERON:0005562,5.92e-08,23;UBERON:0007690,5.92e-08,23;UBERON:0006562,3.36e-07,24;UBERON:0003408,3.36e-07,24;UBERON:0001557,3.36e-07,24;UBERON:0001042,3.36e-07,24;UBERON:0008814,3.36e-07,24;UBERON:0009145,3.36e-07,24;UBERON:0000077,4.08e-07,35|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0.16787927191189,0.233612640595526,3.22808308603941,3.09735188733667,3.97909694747389,3.25314139628459,1.83475965689274,4.62241970814255,3.75907730401689,3.33109761815663,3.84703008040669,3.49780939064073,15.1421839371954,11.6547268564878,5.09267582157636,0.425216450755349,1.68794617041505,1.56719873483361,0.319984845586813,0,0.57423196411502,0,0.215471232685889,0.190023419456374,1.00812051903972,0,2.54012269383853,2.46025915033828,0,0,0,0,0.837063261473815,0.7813353445238,2.09409497589519,1.76469446409304,2.04913645487534,2.91306211818692,0.125896817975577,0.709638518536602,1.83546752161682,0.782391344348039,2.18025156380447,0.878744730937887,0.58328969722285,1.67983705950435,2.87505128729943,5.87239121202077,5.07753499407941,7.05796978199174,0.257259436035947,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,1.19840044207362,1.15265491596466,2.90330914463737,3.51015439662396,3.36519938162211,2.28520787523043,1.32521124570968,2.44981598429908,2.20444583341944,5.51531271966013,0,1.78762273319263,1.53606533256243,0.791317726381163,1.82975287204819,0.52091337055676,1.67509799400829,4.50210088025344,1.06958773443767,1.47314292736834,1.70846016958924,1.3047961207771,0.832988126665025,0.831287161174641,0.869593466105033,0.860423876981386,0.679971333707751,2.15881276655127,0,0.448026887097336,0.983110940922263,0.681721290312231,0.519572009205738,0,0.422530259330042,0,7.64415719119937,0,0,0.760079596425296,0,0.68510327831436,5.69663344023778,0.593768556259299,1.21439728736295,1.21786191324856,1.61430848079241,0.60289056221049,1.05829836422134,0.251333182659351,2.22475470960936,1.59059292611903,6.19227386364912,1.13236794963186,3.5334642953663,2.42437626567611,0,0.292780797011547,0,1.27728527604296,2.63593273913025,1.79970819298022,0.889491589511453,1.79748767285787,0,1.38219787324151,2.08589184230732,1.79000820131231,0.62336413367868,1.62241263067758,1.2220723662038,3.6078021476927,0.505445516867349,1.26265113531884,1.43132487258974,1.60931473103431,1.44049703844279,1.20563854268572,1.56483948048054,1.2811372028485,1.21812241927647,4.13925393182425,0.431135985865684,2.45837904218165,1.40760899331159,1.53437012699302,0.834141747676794,1.0447564995665,0.411564272815887,2.38841120182192,2.1066395619397,2.31613116403244,1.70498099637356,2.07125772535502,0.469052119962192,1.80062061461015,0.710234206755631,1.57411385397923,1.23413690309903,0.465067889500816,1.07309360559848,1.40118410840603,0.987359099480883,0.985004784474571,0.486412857275134,0.730999937126662,1.3173006917463,0.805238512562231,2.73376933133365,2.26390147234426,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,1.33426826306922,0.570676878337677,0,0.658795818896044,2.01068167040216,0.795825888164603,0.974820435595601,1.79763881730844,0.648414149624083,0.597423819763102,2.0863469104839,1.14248512609729,2.25415471346161,0.610953983535943,1.74557238450863,0.911765658574141,0.885311519739602,0.442830443938806,0.627994911365499,0.987177311374404,0.592905254174298,1.83529616287703,1.76903095601883,2.02375901146368,3.85434230638156,1.92941727801933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|EntrezGene=20442
|HGNC=
|MCL_coexpression_id=122
|UniProt=P54751,Q544T4
|association_with_transcript=40bp_to_NM_009177,uc007wba.1,uc007wbb.1_5end
|description=CAGE_peak_3_at_St3gal1_5end
|id=chr15:67008386..67008403,-
|ontology_enrichment_celltype=CL:0000988!3.00e-07!32;CL:0002032!3.00e-07!32;CL:0000037!3.00e-07!32;CL:0000566!3.00e-07!32;CL:0000837!3.00e-07!32;CL:0002031!7.65e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,8.79e-08,25;CL:0000988,1.01e-07,32;CL:0002032,1.01e-07,32;CL:0000037,1.01e-07,32;CL:0000837,1.01e-07,32;CL:0000838,9.82e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!5.67e-12!45;UBERON:0003061!5.67e-12!45;UBERON:0002193!7.29e-11!48;UBERON:0004177!7.60e-10!29;UBERON:0002405!5.40e-08!70;UBERON:0002370!3.60e-07!23;UBERON:0000974!3.60e-07!23;UBERON:0004807!3.60e-07!23;UBERON:0005058!3.60e-07!23;UBERON:0003351!3.60e-07!23;UBERON:0009113!3.60e-07!23;UBERON:0003295!3.60e-07!23;UBERON:0009722!3.60e-07!23;UBERON:0005562!3.60e-07!23;UBERON:0007690!3.60e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.00e-13,45;UBERON:0003061,5.00e-13,45;UBERON:0002193,3.17e-12,48;UBERON:0002405,3.17e-12,48;UBERON:0004177,7.50e-11,29;UBERON:0005057,7.50e-11,29;UBERON:0002370,5.92e-08,23;UBERON:0000974,5.92e-08,23;UBERON:0004807,5.92e-08,23;UBERON:0005058,5.92e-08,23;UBERON:0003351,5.92e-08,23;UBERON:0009113,5.92e-08,23;UBERON:0003295,5.92e-08,23;UBERON:0009722,5.92e-08,23;UBERON:0005562,5.92e-08,23;UBERON:0007690,5.92e-08,23;UBERON:0006562,3.36e-07,24;UBERON:0003408,3.36e-07,24;UBERON:0001557,3.36e-07,24;UBERON:0001042,3.36e-07,24;UBERON:0008814,3.36e-07,24;UBERON:0009145,3.36e-07,24;UBERON:0000077,4.08e-07,35
|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0.16787927191189,0.233612640595526,3.22808308603941,3.09735188733667,3.97909694747389,3.25314139628459,1.83475965689274,4.62241970814255,3.75907730401689,3.33109761815663,3.84703008040669,3.49780939064073,15.1421839371954,11.6547268564878,5.09267582157636,0.425216450755349,1.68794617041505,1.56719873483361,0.319984845586813,0,0.57423196411502,0,0.215471232685889,0.190023419456374,1.00812051903972,0,2.54012269383853,2.46025915033828,0,0,0,0,0.837063261473815,0.7813353445238,2.09409497589519,1.76469446409304,2.04913645487534,2.91306211818692,0.125896817975577,0.709638518536602,1.83546752161682,0.782391344348039,2.18025156380447,0.878744730937887,0.58328969722285,1.67983705950435,2.87505128729943,5.87239121202077,5.07753499407941,7.05796978199174,0.257259436035947,1.14613375975503,1.03134418455488,1.21389876515759,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,1.19840044207362,1.15265491596466,2.90330914463737,3.51015439662396,3.36519938162211,2.28520787523043,1.32521124570968,2.44981598429908,2.20444583341944,5.51531271966013,0,1.78762273319263,1.53606533256243,0.791317726381163,1.82975287204819,0.52091337055676,1.67509799400829,4.50210088025344,1.06958773443767,1.47314292736834,1.70846016958924,1.3047961207771,0.832988126665025,0.831287161174641,0.869593466105033,0.860423876981386,0.679971333707751,2.15881276655127,0,0.448026887097336,0.983110940922263,0.681721290312231,0.519572009205738,0,0.422530259330042,0,7.64415719119937,0,0,0.760079596425296,0,0.68510327831436,5.69663344023778,0.593768556259299,1.21439728736295,1.21786191324856,1.61430848079241,0.60289056221049,1.05829836422134,0.251333182659351,2.22475470960936,1.59059292611903,6.19227386364912,1.13236794963186,3.5334642953663,2.42437626567611,0,0.292780797011547,0,1.27728527604296,2.63593273913025,1.79970819298022,0.889491589511453,1.79748767285787,0,1.38219787324151,2.08589184230732,1.79000820131231,0.62336413367868,1.62241263067758,1.2220723662038,3.6078021476927,0.505445516867349,1.26265113531884,1.43132487258974,1.60931473103431,1.44049703844279,1.20563854268572,1.56483948048054,1.2811372028485,1.21812241927647,4.13925393182425,0.431135985865684,2.45837904218165,1.40760899331159,1.53437012699302,0.834141747676794,1.0447564995665,0.411564272815887,2.38841120182192,2.1066395619397,2.31613116403244,1.70498099637356,2.07125772535502,0.469052119962192,1.80062061461015,0.710234206755631,1.57411385397923,1.23413690309903,0.465067889500816,1.07309360559848,1.40118410840603,0.987359099480883,0.985004784474571,0.486412857275134,0.730999937126662,1.3173006917463,0.805238512562231,2.73376933133365,2.26390147234426,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,1.33426826306922,0.570676878337677,0,0.658795818896044,2.01068167040216,0.795825888164603,0.974820435595601,1.79763881730844,0.648414149624083,0.597423819763102,2.0863469104839,1.14248512609729,2.25415471346161,0.610953983535943,1.74557238450863,0.911765658574141,0.885311519739602,0.442830443938806,0.627994911365499,0.987177311374404,0.592905254174298,1.83529616287703,1.76903095601883,2.02375901146368,3.85434230638156,1.92941727801933,1.01850340712568,2.30156909960649,1.62135226775035,0,0,0.744281895337007,1.5601883655728,1.76805214562978,1.07638448113147,0.964887042726734,2.77129785249907,1.13694847062291,1.46668478797823,1.18821560042632,1.17345124144251,1.17254380209271,0.952174563544055,2.14647012643579,1.41871629695572,1.99318220683897,1.59454768657487,1.47476983244164,2.07221978239075,1.88043776155965,0,0.54390568381871,0.491764273019036,2.20749397043786,2.72936002979246,1.40654023910644,0.655739781506702,0.504941854408746,0.94652465824877,1.56175497718655,1.72338718186239,1.19484398976276,1.78238939265915,2.83076530788832,0.809621403349789,1.75353514746787,0.395287777946524,2.57057053137446,1.41940085208269,1.78065603667255,1.14020871547503,1.48473110675282,0,0.242780636154981,0.604647113929502,0.565815239267694,1.18120757152309,0.614870295887855,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,0,0,1.02131881726136,1.8006109403131,1.03486947026204,1.07168517515796,1.24138163549592,1.07021290561242,0.658196082408484,0.608929898229199,0,0.63549621259146,0,0.32977250588296,0.645857706783622,0.844380948994182,0.358117032009409,0.164140899745061,1.1659233465194,2.03967832211561,6.32222258952055,1.857481811669,2.03713980106683,3.76736914009382,5.87785179200408,5.0331198105435,2.54967644990783,2.51912614182584,1.93479963326193,0,1.10717597753397,1.01659733563424,0.648032044930808,0.627264888043406,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0.518459893167171,0.621339313086926,0,1.34564891439581,0.66183396182839,0.583353565032143,1.29159823477731,0.675824501963113,1.05621514781179,1.5624526181274,0.419437377702843,0.724752362478018,0.288030006257865,2.8441000856536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|short_description=p3@St3gal1
}}

Revision as of 10:46, 13 September 2013

Short description:p3@St3gal1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_St3gal1_5end
Coexpression cluster:MCL_coexpression_mm9:122
Association with transcript: 40bp_to_NM_009177, uc007wba.1, uc007wbb.1_5end
EntrezGene:St3gal1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@St3gal1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.14
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H15.88
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E44.84
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G25.84
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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