FFCP PHASE1:Mm9::chr15:75069502..75069519,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1609|UniProt=D3YW91|association_with_transcript=-304bp_to_ENSMUST00000089689_5end|description=CAGE_peak_1_at_ENSMUST00000089689_5end|id=chr15:75069502..75069519,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.82e-23,3;CL:0002202,2.82e-23,3;CL:0000069,2.82e-23,3;CL:0002632,2.82e-23,3;CL:0002368,2.82e-23,3;CL:0000307,2.82e-23,3;CL:0000377,2.82e-23,3;CL:0000057,2.06e-08,1;CL:0000632,2.06e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.39e-08!51;UBERON:0003100!1.10e-07!11;UBERON:0003975!5.05e-07!5;UBERON:0001008!8.69e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003975,1.31e-36,5;UBERON:0005795,5.28e-30,4;UBERON:0000995,5.28e-30,4;UBERON:0003126,2.82e-23,3;UBERON:0001005,2.82e-23,3;UBERON:0007196,2.82e-23,3;UBERON:0001558,2.82e-23,3;UBERON:0003134,5.86e-23,8;UBERON:0004175,2.01e-20,9;UBERON:0000474,2.01e-20,9;UBERON:0003100,9.88e-17,11;UBERON:0001987,1.60e-15,2;UBERON:0003124,1.60e-15,2;UBERON:0004340,1.60e-15,2;UBERON:0005631,1.14e-10,3;UBERON:0000478,1.14e-10,3;UBERON:0000158,1.14e-10,3;UBERON:0006834,8.81e-09,1;UBERON:0000996,2.89e-08,1;UBERON:0003133,1.12e-07,24;UBERON:0005178,2.50e-07,17;UBERON:0005181,2.50e-07,17;UBERON:0002224,2.50e-07,17;UBERON:0000915,2.50e-07,17;UBERON:0008947,2.50e-07,17;UBERON:0003258,2.50e-07,17;UBERON:0005156,4.42e-07,26;UBERON:0000990,4.42e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.226714680320357,0.289864488701678,1.72084775396277,0,0,0,0,0.280888840263504,0,0.779358013808606,0,0,0,0,0,4.97929394325792,5.06719730950197,3.53867111510348,0.45673551887624,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.62336413367868,0,0,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.969762435838129,0.561086559122548,0.316182685621286,0.442830443938806,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0.167506257441816,0,0,0,0,0,0.491589944147214,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,1.27099242518292,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0.179427713218951,0,0.386379188064381,3.75364950902364,5.49454872801795,1.07184189539533,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.695603506861264|short_description=p1@ENSMUST00000089689}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1609 | |||
|UniProt=D3YW91 | |||
|association_with_transcript=-304bp_to_ENSMUST00000089689_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000089689_5end | |||
|id=chr15:75069502..75069519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.82e-23,3;CL:0002202,2.82e-23,3;CL:0000069,2.82e-23,3;CL:0002632,2.82e-23,3;CL:0002368,2.82e-23,3;CL:0000307,2.82e-23,3;CL:0000377,2.82e-23,3;CL:0000057,2.06e-08,1;CL:0000632,2.06e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-08!51;UBERON:0003100!1.10e-07!11;UBERON:0003975!5.05e-07!5;UBERON:0001008!8.69e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003975,1.31e-36,5;UBERON:0005795,5.28e-30,4;UBERON:0000995,5.28e-30,4;UBERON:0003126,2.82e-23,3;UBERON:0001005,2.82e-23,3;UBERON:0007196,2.82e-23,3;UBERON:0001558,2.82e-23,3;UBERON:0003134,5.86e-23,8;UBERON:0004175,2.01e-20,9;UBERON:0000474,2.01e-20,9;UBERON:0003100,9.88e-17,11;UBERON:0001987,1.60e-15,2;UBERON:0003124,1.60e-15,2;UBERON:0004340,1.60e-15,2;UBERON:0005631,1.14e-10,3;UBERON:0000478,1.14e-10,3;UBERON:0000158,1.14e-10,3;UBERON:0006834,8.81e-09,1;UBERON:0000996,2.89e-08,1;UBERON:0003133,1.12e-07,24;UBERON:0005178,2.50e-07,17;UBERON:0005181,2.50e-07,17;UBERON:0002224,2.50e-07,17;UBERON:0000915,2.50e-07,17;UBERON:0008947,2.50e-07,17;UBERON:0003258,2.50e-07,17;UBERON:0005156,4.42e-07,26;UBERON:0000990,4.42e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.226714680320357,0.289864488701678,1.72084775396277,0,0,0,0,0.280888840263504,0,0.779358013808606,0,0,0,0,0,4.97929394325792,5.06719730950197,3.53867111510348,0.45673551887624,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.62336413367868,0,0,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.969762435838129,0.561086559122548,0.316182685621286,0.442830443938806,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0.167506257441816,0,0,0,0,0,0.491589944147214,0.863424909329478,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,1.27099242518292,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0.179427713218951,0,0.386379188064381,3.75364950902364,5.49454872801795,1.07184189539533,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.695603506861264 | |||
|short_description=p1@ENSMUST00000089689 | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p1@ENSMUST00000089689 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000089689_5end |
Coexpression cluster: | MCL_coexpression_mm9:1609 |
Association with transcript: | -304bp_to_ENSMUST00000089689_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.82e-23 | 3 |
epithelial cell of tracheobronchial tree | 2.82e-23 | 3 |
branched duct epithelial cell | 2.82e-23 | 3 |
epithelial cell of lower respiratory tract | 2.82e-23 | 3 |
respiratory epithelial cell | 2.82e-23 | 3 |
tracheal epithelial cell | 2.82e-23 | 3 |
tracheoblast | 2.82e-23 | 3 |
fibroblast | 2.06e-08 | 1 |
hepatic stellate cell | 2.06e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
internal female genitalia | 1.31e-36 | 5 |
embryonic uterus | 5.28e-30 | 4 |
uterus | 5.28e-30 | 4 |
trachea | 2.82e-23 | 3 |
respiratory airway | 2.82e-23 | 3 |
tracheobronchial tree | 2.82e-23 | 3 |
lower respiratory tract | 2.82e-23 | 3 |
female reproductive organ | 5.86e-23 | 8 |
internal genitalia | 2.01e-20 | 9 |
female reproductive system | 2.01e-20 | 9 |
female organism | 9.88e-17 | 11 |
placenta | 1.60e-15 | 2 |
chorion | 1.60e-15 | 2 |
allantois | 1.60e-15 | 2 |
extraembryonic membrane | 1.14e-10 | 3 |
extraembryonic structure | 1.14e-10 | 3 |
membranous layer | 1.14e-10 | 3 |
uterus or analog | 8.81e-09 | 1 |
vagina | 2.89e-08 | 1 |
reproductive organ | 1.12e-07 | 24 |
thoracic cavity element | 2.50e-07 | 17 |
thoracic segment organ | 2.50e-07 | 17 |
thoracic cavity | 2.50e-07 | 17 |
thoracic segment of trunk | 2.50e-07 | 17 |
respiratory primordium | 2.50e-07 | 17 |
endoderm of foregut | 2.50e-07 | 17 |
reproductive structure | 4.42e-07 | 26 |
reproductive system | 4.42e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.