FFCP PHASE1:Hg19::chr4:42400017..42400037,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=152573|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25159|TSSclassifier=S|UniProt=A0PJX4|association_with_transcript=161bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end|coexpression_cluster_id=C102|description=CAGE_peak_4_at_SHISA3_5end|id=chr4:42400017..42400037,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2!CL:0000333;5.35e-08;5!CL:0002188;6.78e-08;5|ontology_enrichment_celltype_v019_2=CL:0002188,6.55e-08,5|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!UBERON:0006965;9.86e-18;2!UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;7.17e-07;6|ontology_enrichment_disease_v019_2=DOID:169,7.17e-07,6|ontology_enrichment_uberon=UBERON:0003103!9.44e-12!69;UBERON:0004573!8.92e-11!33;UBERON:0004571!8.92e-11!33;UBERON:0004872!1.68e-10!84;UBERON:0003914!1.70e-10!118;UBERON:0001637!2.98e-10!42;UBERON:0003509!2.98e-10!42;UBERON:0004572!2.98e-10!42;UBERON:0007100!5.16e-10!27;UBERON:0001009!1.15e-09!113;UBERON:0001981!3.04e-09!60;UBERON:0007500!3.04e-09!60;UBERON:0004537!3.04e-09!60;UBERON:0006965!3.04e-09!60;UBERON:0007023!7.52e-09!115;UBERON:0000055!1.72e-08!69;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0000947!1.34e-07!21;UBERON:0010191!1.34e-07!21;UBERON:0000477!1.80e-07!286;UBERON:0004535!1.99e-07!110;UBERON:0004111!2.37e-07!241;UBERON:0000468!5.61e-07!659|ontology_enrichment_uberon_v019=UBERON:0002135;5.97e-34;1!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002135,3.61e-34,1;UBERON:0002133,7.67e-18,2;UBERON:0003978,2.31e-12,3;UBERON:0009751,2.31e-12,3;UBERON:0000946,2.31e-12,3;UBERON:0002523,2.31e-12,3;UBERON:0005983,2.31e-12,3;UBERON:0002165,2.31e-12,3;UBERON:0002062,2.31e-12,3;UBERON:0007280,2.31e-12,3;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.471249609382746,0.606547444719948,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0.599037001496973,0.858452096273142,0.669514372325618,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,6.79296311799095,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0.756998549010474,0,0,0.101988829741982,0,0.0918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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=152573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25159 | |||
|TSSclassifier=S | |||
|UniProt=A0PJX4 | |||
|association_with_transcript=161bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_4_at_SHISA3_5end | |||
|id=chr4:42400017..42400037,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2!CL:0000333;5.35e-08;5!CL:0002188;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.55e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!UBERON:0006965;9.86e-18;2!UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003103!9.44e-12!69;UBERON:0004573!8.92e-11!33;UBERON:0004571!8.92e-11!33;UBERON:0004872!1.68e-10!84;UBERON:0003914!1.70e-10!118;UBERON:0001637!2.98e-10!42;UBERON:0003509!2.98e-10!42;UBERON:0004572!2.98e-10!42;UBERON:0007100!5.16e-10!27;UBERON:0001009!1.15e-09!113;UBERON:0001981!3.04e-09!60;UBERON:0007500!3.04e-09!60;UBERON:0004537!3.04e-09!60;UBERON:0006965!3.04e-09!60;UBERON:0007023!7.52e-09!115;UBERON:0000055!1.72e-08!69;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0000947!1.34e-07!21;UBERON:0010191!1.34e-07!21;UBERON:0000477!1.80e-07!286;UBERON:0004535!1.99e-07!110;UBERON:0004111!2.37e-07!241;UBERON:0000468!5.61e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.97e-34;1!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,3.61e-34,1;UBERON:0002133,7.67e-18,2;UBERON:0003978,2.31e-12,3;UBERON:0009751,2.31e-12,3;UBERON:0000946,2.31e-12,3;UBERON:0002523,2.31e-12,3;UBERON:0005983,2.31e-12,3;UBERON:0002165,2.31e-12,3;UBERON:0002062,2.31e-12,3;UBERON:0007280,2.31e-12,3;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.471249609382746,0.606547444719948,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0.599037001496973,0.858452096273142,0.669514372325618,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,6.79296311799095,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0.756998549010474,0,0,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0.190941474834495,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p4@SHISA3 | |||
}} |
Revision as of 10:57, 13 September 2013
Short description: | p4@SHISA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SHISA3_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 161bp_to_ENST00000319234, NM_001080505, uc003gwp.2_5end |
EntrezGene: | SHISA3 |
HGNC: | 25159 |
UniProt: | A0PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 3.61e-34 | 1 |
atrioventricular valve | 7.67e-18 | 2 |
valve | 2.31e-12 | 3 |
cardiac mesenchyme | 2.31e-12 | 3 |
cardial valve | 2.31e-12 | 3 |
tunica intima | 2.31e-12 | 3 |
heart layer | 2.31e-12 | 3 |
endocardium | 2.31e-12 | 3 |
endocardial cushion | 2.31e-12 | 3 |
presumptive endocardium | 2.31e-12 | 3 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.17e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.