FFCP PHASE1:Mm9::chr15:77776220..77776230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=239554|HGNC=|MCL_coexpression_id=52|UniProt=Q3TBC9|association_with_transcript=87bp_to_ENSMUST00000140096,uc007woi.2_5end|description=CAGE_peak_6_at_Foxred2_5end|id=chr15:77776220..77776230,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.09e-12,3|ontology_enrichment_disease=DOID:0060100!2.33e-12!3;DOID:4045!2.33e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.09e-12,3;DOID:4045,1.09e-12,3;DOID:0050686,8.54e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,2.09409497589519,0,1.36609096991689,1.45653105909346,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45377032249785,2.33807404142582,3.18005617059306,0,1.28326477414318,0,21.3320010945999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p6@Foxred2}} | ||
|EntrezGene=239554 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=Q3TBC9 | |||
|association_with_transcript=87bp_to_ENSMUST00000140096,uc007woi.2_5end | |||
|description=CAGE_peak_6_at_Foxred2_5end | |||
|id=chr15:77776220..77776230,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.09e-12,3 | |||
|ontology_enrichment_disease=DOID:0060100!2.33e-12!3;DOID:4045!2.33e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.09e-12,3;DOID:4045,1.09e-12,3;DOID:0050686,8.54e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,2.09409497589519,0,1.36609096991689,1.45653105909346,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45377032249785,2.33807404142582,3.18005617059306,0,1.28326477414318,0,21.3320010945999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Foxred2 | |||
}} | |||
Revision as of 11:03, 13 September 2013
| Short description: | p6@Foxred2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Foxred2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:52 |
| Association with transcript: | 87bp_to_ENSMUST00000140096, uc007woi.2_5end |
| EntrezGene: | Foxred2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of thymus | 1.09e-12 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 1.09e-12 | 3 |
| muscle cancer | 1.09e-12 | 3 |
| organ system cancer | 8.54e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
