FFCP PHASE1:Mm9::chr16:19067325..19067338,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:19067325..19067338,+|id=chr16:19067325..19067338,+|ontology_enrichment_celltype=CL:0000553!1.09e-14!6;CL:0000556!1.09e-14!6;CL:0000050!1.60e-09!9;CL:0000414!1.21e-07!11;CL:0002027!1.46e-07!3;CL:0002006!1.46e-07!3;CL:0002024!1.46e-07!3|ontology_enrichment_celltype_v019_2=CL:0000553,3.20e-11,6;CL:0000556,3.20e-11,6;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000050,1.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.10e-08!48;UBERON:0002465!5.33e-08!3;UBERON:0007023!3.54e-07!51;UBERON:0002106!4.36e-07!6;UBERON:0004457!4.36e-07!6;UBERON:0000042!4.36e-07!6;UBERON:0004854!4.36e-07!6;UBERON:0009034!4.36e-07!6;UBERON:0002095!4.36e-07!6;UBERON:0004782!4.36e-07!6;UBERON:0003281!4.36e-07!6;UBERON:0009664!4.36e-07!6;UBERON:0002296!4.36e-07!6;UBERON:0005602!4.36e-07!6;UBERON:0001179!4.36e-07!6;UBERON:0006293!4.36e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.72e-18,6;UBERON:0004457,2.72e-18,6;UBERON:0000042,2.72e-18,6;UBERON:0004854,2.72e-18,6;UBERON:0009034,2.72e-18,6;UBERON:0002095,2.72e-18,6;UBERON:0004782,2.72e-18,6;UBERON:0003281,2.72e-18,6;UBERON:0009664,2.72e-18,6;UBERON:0002296,2.72e-18,6;UBERON:0005602,2.72e-18,6;UBERON:0001179,2.72e-18,6;UBERON:0006293,2.72e-18,6;UBERON:0003887,4.21e-11,10;UBERON:0002075,7.53e-09,19;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0000029,1.56e-08,1;UBERON:0001097,1.56e-08,1;UBERON:0003968,1.56e-08,1;UBERON:0001467,1.56e-08,1;UBERON:0000945,5.05e-07,16;UBERON:0010039,5.05e-07,16;UBERON:0002390,5.33e-07,45;UBERON:0003061,5.33e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0.699561878128147,3.15462165358238,2.60517423850904,4.66828616977833,0.17008658030214,0,0,0.639969691173627,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.6879562987114,0,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0.662524555381181,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,2.0720530270516,2.05041341581538,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:19067325..19067338,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:19067325..19067338,+ | |||
|id=chr16:19067325..19067338,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.09e-14!6;CL:0000556!1.09e-14!6;CL:0000050!1.60e-09!9;CL:0000414!1.21e-07!11;CL:0002027!1.46e-07!3;CL:0002006!1.46e-07!3;CL:0002024!1.46e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.20e-11,6;CL:0000556,3.20e-11,6;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000050,1.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.10e-08!48;UBERON:0002465!5.33e-08!3;UBERON:0007023!3.54e-07!51;UBERON:0002106!4.36e-07!6;UBERON:0004457!4.36e-07!6;UBERON:0000042!4.36e-07!6;UBERON:0004854!4.36e-07!6;UBERON:0009034!4.36e-07!6;UBERON:0002095!4.36e-07!6;UBERON:0004782!4.36e-07!6;UBERON:0003281!4.36e-07!6;UBERON:0009664!4.36e-07!6;UBERON:0002296!4.36e-07!6;UBERON:0005602!4.36e-07!6;UBERON:0001179!4.36e-07!6;UBERON:0006293!4.36e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.72e-18,6;UBERON:0004457,2.72e-18,6;UBERON:0000042,2.72e-18,6;UBERON:0004854,2.72e-18,6;UBERON:0009034,2.72e-18,6;UBERON:0002095,2.72e-18,6;UBERON:0004782,2.72e-18,6;UBERON:0003281,2.72e-18,6;UBERON:0009664,2.72e-18,6;UBERON:0002296,2.72e-18,6;UBERON:0005602,2.72e-18,6;UBERON:0001179,2.72e-18,6;UBERON:0006293,2.72e-18,6;UBERON:0003887,4.21e-11,10;UBERON:0002075,7.53e-09,19;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0000029,1.56e-08,1;UBERON:0001097,1.56e-08,1;UBERON:0003968,1.56e-08,1;UBERON:0001467,1.56e-08,1;UBERON:0000945,5.05e-07,16;UBERON:0010039,5.05e-07,16;UBERON:0002390,5.33e-07,45;UBERON:0003061,5.33e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0.699561878128147,3.15462165358238,2.60517423850904,4.66828616977833,0.17008658030214,0,0,0.639969691173627,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.6879562987114,0,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0.662524555381181,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,2.0720530270516,2.05041341581538,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:19067325..19067338,+ | |||
}} |
Revision as of 12:07, 13 September 2013
Short description: | p@chr16:19067325..19067338, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19067325..19067338, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.20e-11 | 6 |
megakaryocyte | 3.20e-11 | 6 |
lymphocyte of B lineage | 1.05e-07 | 1 |
B cell | 1.05e-07 | 1 |
pro-B cell | 1.05e-07 | 1 |
megakaryocyte-erythroid progenitor cell | 1.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.72e-18 | 6 |
cavity lining | 2.72e-18 | 6 |
serous membrane | 2.72e-18 | 6 |
gastrointestinal system mesentery | 2.72e-18 | 6 |
stomach region | 2.72e-18 | 6 |
mesentery | 2.72e-18 | 6 |
gastrointestinal system serosa | 2.72e-18 | 6 |
mesentery of stomach | 2.72e-18 | 6 |
gut mesentery | 2.72e-18 | 6 |
dorsal mesentery | 2.72e-18 | 6 |
dorsal mesogastrium | 2.72e-18 | 6 |
peritoneal cavity | 2.72e-18 | 6 |
spleen primordium | 2.72e-18 | 6 |
intraembryonic coelom | 4.21e-11 | 10 |
viscus | 7.53e-09 | 19 |
hemolymphoid system | 1.50e-08 | 48 |
immune system | 1.50e-08 | 48 |
lymph node | 1.56e-08 | 1 |
axillary lymph node | 1.56e-08 | 1 |
peripheral lymph node | 1.56e-08 | 1 |
shoulder | 1.56e-08 | 1 |
stomach | 5.05e-07 | 16 |
food storage organ | 5.05e-07 | 16 |
hematopoietic system | 5.33e-07 | 45 |
blood island | 5.33e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.