FFCP PHASE1:Mm9::chr16:19236939..19236949,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:19236939..19236949,-|id=chr16:19236939..19236949,-|ontology_enrichment_celltype=CL:0000553!2.65e-23!6;CL:0000556!2.65e-23!6;CL:0000050!2.32e-15!9;CL:0000414!1.82e-12!11;CL:0002027!5.52e-12!3;CL:0002006!5.52e-12!3;CL:0002024!5.52e-12!3;CL:0000839!1.85e-10!13;CL:0000763!2.19e-08!16;CL:0000049!5.76e-07!19;CL:0002031!6.37e-07!25|ontology_enrichment_celltype_v019_2=CL:0000553,1.37e-19,6;CL:0000556,1.37e-19,6;CL:0000945,1.55e-13,1;CL:0000236,1.55e-13,1;CL:0000826,1.55e-13,1;CL:0000050,2.54e-13,9;CL:0000839,1.94e-09,13;CL:0002031,1.71e-08,25;CL:0000763,8.64e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.19e-08!16;UBERON:0002193!4.79e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002106,3.81e-09,6;UBERON:0004457,3.81e-09,6;UBERON:0000042,3.81e-09,6;UBERON:0004854,3.81e-09,6;UBERON:0009034,3.81e-09,6;UBERON:0002095,3.81e-09,6;UBERON:0004782,3.81e-09,6;UBERON:0003281,3.81e-09,6;UBERON:0009664,3.81e-09,6;UBERON:0002296,3.81e-09,6;UBERON:0005602,3.81e-09,6;UBERON:0001179,3.81e-09,6;UBERON:0006293,3.81e-09,6;UBERON:0002371,8.64e-08,16;UBERON:0002390,3.16e-07,45;UBERON:0003061,3.16e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,6.15151222448563,6.30726394586398,3.39511721438424,0,0,0,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,15.5362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0,0,0.410082683163076,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:19236939..19236949,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:19236939..19236949,- | |||
|id=chr16:19236939..19236949,- | |||
|ontology_enrichment_celltype=CL:0000553!2.65e-23!6;CL:0000556!2.65e-23!6;CL:0000050!2.32e-15!9;CL:0000414!1.82e-12!11;CL:0002027!5.52e-12!3;CL:0002006!5.52e-12!3;CL:0002024!5.52e-12!3;CL:0000839!1.85e-10!13;CL:0000763!2.19e-08!16;CL:0000049!5.76e-07!19;CL:0002031!6.37e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.37e-19,6;CL:0000556,1.37e-19,6;CL:0000945,1.55e-13,1;CL:0000236,1.55e-13,1;CL:0000826,1.55e-13,1;CL:0000050,2.54e-13,9;CL:0000839,1.94e-09,13;CL:0002031,1.71e-08,25;CL:0000763,8.64e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.19e-08!16;UBERON:0002193!4.79e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002106,3.81e-09,6;UBERON:0004457,3.81e-09,6;UBERON:0000042,3.81e-09,6;UBERON:0004854,3.81e-09,6;UBERON:0009034,3.81e-09,6;UBERON:0002095,3.81e-09,6;UBERON:0004782,3.81e-09,6;UBERON:0003281,3.81e-09,6;UBERON:0009664,3.81e-09,6;UBERON:0002296,3.81e-09,6;UBERON:0005602,3.81e-09,6;UBERON:0001179,3.81e-09,6;UBERON:0006293,3.81e-09,6;UBERON:0002371,8.64e-08,16;UBERON:0002390,3.16e-07,45;UBERON:0003061,3.16e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,6.15151222448563,6.30726394586398,3.39511721438424,0,0,0,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,15.5362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0,0,0.410082683163076,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:19236939..19236949,- | |||
}} |
Revision as of 12:08, 13 September 2013
Short description: | p@chr16:19236939..19236949, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19236939..19236949, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.37e-19 | 6 |
megakaryocyte | 1.37e-19 | 6 |
lymphocyte of B lineage | 1.55e-13 | 1 |
B cell | 1.55e-13 | 1 |
pro-B cell | 1.55e-13 | 1 |
megakaryocyte-erythroid progenitor cell | 2.54e-13 | 9 |
myeloid lineage restricted progenitor cell | 1.94e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.71e-08 | 25 |
myeloid cell | 8.64e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.62e-14 | 1 |
axillary lymph node | 3.62e-14 | 1 |
peripheral lymph node | 3.62e-14 | 1 |
shoulder | 3.62e-14 | 1 |
hemolymphoid system | 1.28e-09 | 48 |
immune system | 1.28e-09 | 48 |
spleen | 3.81e-09 | 6 |
cavity lining | 3.81e-09 | 6 |
serous membrane | 3.81e-09 | 6 |
gastrointestinal system mesentery | 3.81e-09 | 6 |
stomach region | 3.81e-09 | 6 |
mesentery | 3.81e-09 | 6 |
gastrointestinal system serosa | 3.81e-09 | 6 |
mesentery of stomach | 3.81e-09 | 6 |
gut mesentery | 3.81e-09 | 6 |
dorsal mesentery | 3.81e-09 | 6 |
dorsal mesogastrium | 3.81e-09 | 6 |
peritoneal cavity | 3.81e-09 | 6 |
spleen primordium | 3.81e-09 | 6 |
bone marrow | 8.64e-08 | 16 |
hematopoietic system | 3.16e-07 | 45 |
blood island | 3.16e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.