FFCP PHASE1:Hg19::chr4:90800656..90800673,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22915|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7178|TSSclassifier=S|UniProt=Q13201|association_with_transcript=-9bp_to_ENST00000394980_5end|description=CAGE_peak_4_at_MMRN1_5end|id=chr4:90800656..90800673,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;3.24e-15;5!CL:0002535;1.57e-10;2!CL:0000047;3.42e-10;2!CL:0000148;4.42e-08;10|ontology_enrichment_celltype_v019_2=CL:0002322,3.35e-15,5;CL:0002535,1.57e-10,2;CL:0000148,4.50e-08,10;CL:0000541,4.50e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002308!3.01e-17!9;UBERON:0000125!3.01e-17!9;UBERON:0001049!4.82e-16!57;UBERON:0005068!4.82e-16!57;UBERON:0006241!4.82e-16!57;UBERON:0007135!4.82e-16!57;UBERON:0000369!7.83e-15!4;UBERON:0002435!7.83e-15!4;UBERON:0000204!7.83e-15!4;UBERON:0010082!7.83e-15!4;UBERON:0001017!4.40e-14!82;UBERON:0002148!2.57e-13!2;UBERON:0009662!2.57e-13!2;UBERON:0005743!2.61e-13!86;UBERON:0002616!5.07e-13!59;UBERON:0002298!7.29e-13!8;UBERON:0000073!8.41e-12!94;UBERON:0001016!8.41e-12!94;UBERON:0003075!1.38e-11!86;UBERON:0007284!1.38e-11!86;UBERON:0002346!5.86e-11!90;UBERON:0000955!1.16e-10!69;UBERON:0006238!1.16e-10!69;UBERON:0003076!1.94e-10!15;UBERON:0003057!1.94e-10!15;UBERON:0002020!2.07e-10!34;UBERON:0003528!2.07e-10!34;UBERON:0001896!1.32e-09!3;UBERON:0005290!1.32e-09!3;UBERON:0010096!1.32e-09!3;UBERON:0005383!1.57e-09!3;UBERON:0005382!1.57e-09!3;UBERON:0000988!3.52e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0009663!1.07e-08!7;UBERON:0002780!1.22e-08!41;UBERON:0001890!1.22e-08!41;UBERON:0006240!1.22e-08!41;UBERON:0004733!1.26e-08!12;UBERON:0002028!1.26e-08!12;UBERON:0007277!1.26e-08!12;UBERON:0003080!2.05e-08!42;UBERON:0004732!5.69e-08!13;UBERON:0001874!9.72e-08!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0003056!6.12e-07!61;UBERON:0002420!7.26e-07!9;UBERON:0007245!7.26e-07!9;UBERON:0010009!7.26e-07!9;UBERON:0010011!7.26e-07!9;UBERON:0000454!7.26e-07!9|ontology_enrichment_uberon_v019=UBERON:0006955;1.57e-10;2!UBERON:0004801;1.57e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.57e-10,2;UBERON:0004801,1.57e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,7.25627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4805643050529,0,0,0,0,0,0,0,0,8.89029047440308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4259642598193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4374765418648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5763997400408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,17.8677090018828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,16.2737995515375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@MMRN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |||
|TSSclassifier=S | |||
|UniProt=Q13201 | |||
|association_with_transcript=-9bp_to_ENST00000394980_5end | |||
|description=CAGE_peak_4_at_MMRN1_5end | |||
|id=chr4:90800656..90800673,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.24e-15;5!CL:0002535;1.57e-10;2!CL:0000047;3.42e-10;2!CL:0000148;4.42e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.35e-15,5;CL:0002535,1.57e-10,2;CL:0000148,4.50e-08,10;CL:0000541,4.50e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!3.01e-17!9;UBERON:0000125!3.01e-17!9;UBERON:0001049!4.82e-16!57;UBERON:0005068!4.82e-16!57;UBERON:0006241!4.82e-16!57;UBERON:0007135!4.82e-16!57;UBERON:0000369!7.83e-15!4;UBERON:0002435!7.83e-15!4;UBERON:0000204!7.83e-15!4;UBERON:0010082!7.83e-15!4;UBERON:0001017!4.40e-14!82;UBERON:0002148!2.57e-13!2;UBERON:0009662!2.57e-13!2;UBERON:0005743!2.61e-13!86;UBERON:0002616!5.07e-13!59;UBERON:0002298!7.29e-13!8;UBERON:0000073!8.41e-12!94;UBERON:0001016!8.41e-12!94;UBERON:0003075!1.38e-11!86;UBERON:0007284!1.38e-11!86;UBERON:0002346!5.86e-11!90;UBERON:0000955!1.16e-10!69;UBERON:0006238!1.16e-10!69;UBERON:0003076!1.94e-10!15;UBERON:0003057!1.94e-10!15;UBERON:0002020!2.07e-10!34;UBERON:0003528!2.07e-10!34;UBERON:0001896!1.32e-09!3;UBERON:0005290!1.32e-09!3;UBERON:0010096!1.32e-09!3;UBERON:0005383!1.57e-09!3;UBERON:0005382!1.57e-09!3;UBERON:0000988!3.52e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0009663!1.07e-08!7;UBERON:0002780!1.22e-08!41;UBERON:0001890!1.22e-08!41;UBERON:0006240!1.22e-08!41;UBERON:0004733!1.26e-08!12;UBERON:0002028!1.26e-08!12;UBERON:0007277!1.26e-08!12;UBERON:0003080!2.05e-08!42;UBERON:0004732!5.69e-08!13;UBERON:0001874!9.72e-08!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0003056!6.12e-07!61;UBERON:0002420!7.26e-07!9;UBERON:0007245!7.26e-07!9;UBERON:0010009!7.26e-07!9;UBERON:0010011!7.26e-07!9;UBERON:0000454!7.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.57e-10;2!UBERON:0004801;1.57e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.57e-10,2;UBERON:0004801,1.57e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,7.25627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4805643050529,0,0,0,0,0,0,0,0,8.89029047440308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4259642598193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4374765418648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5763997400408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,17.8677090018828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,16.2737995515375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MMRN1 | |||
}} |
Revision as of 12:19, 13 September 2013
Short description: | p4@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MMRN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000394980_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | Q13201 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.35e-15 | 5 |
epithelial cell of cervix | 1.57e-10 | 2 |
melanocyte | 4.50e-08 | 10 |
melanoblast | 4.50e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.57e-10 | 2 |
cervix epithelium | 1.57e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.