FFCP PHASE1:Mm9::chr16:25801993..25802014,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22061|HGNC=|MCL_coexpression_id=65|UniProt=O88898,Q569E5,Q3UVI3,Q5CZX0|association_with_transcript=0bp_to_ENSMUST00000040231,ENSMUST00000115304,ENSMUST00000115305,ENSMUST00000115306,NM_001127262,NM_001127263,NM_001127264,NM_001127265,NM_011641,uc007yur.2,uc007yus.2,uc007yut.2,uc007yuu.2,uc007yuv.2,uc007yuw.2_5end|description=CAGE_peak_1_at_Trp63_5end|id=chr16:25801993..25802014,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.33e-08!23;UBERON:0001004!4.35e-07!42;UBERON:0000065!8.44e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.20e-13,43;UBERON:0003102,3.45e-11,22;UBERON:0007811,1.38e-08,36;UBERON:0000072,2.13e-07,27;UBERON:0002102,3.36e-07,7;UBERON:0004710,3.36e-07,7;UBERON:0005419,3.36e-07,7;UBERON:0005417,3.36e-07,7;UBERON:0005729,3.36e-07,7;UBERON:0000014,8.73e-07,5;UBERON:0001003,8.73e-07,5;UBERON:0002097,8.73e-07,5;UBERON:0002199,8.73e-07,5;UBERON:0007029,8.73e-07,5;UBERON:0007376,8.73e-07,5;UBERON:0002416,8.73e-07,5;UBERON:0007383,8.73e-07,5|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,14.9378818297738,13.1747130047051,7.58286667522175,1.7127581957859,0,0.148442139064825,0.520455980298408,0,0,0,0,0,1.23597483867187,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,5.22509276562391,11.625246887949,9.46988351489133,8.19758790665033,2.5289231487682,5.94205028357652,10.2479276128286,6.53150391852747,2.0498195245576,2.99845518591132,5.95017752699736,11.6406716183735,9.07709184805532,17.4191612922309,17.3164628617784,35.3120006516509,40.7455034830935,57.6189981942242,0,0,0,0,0,0.703578179943289,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.644337306610467,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,1.01825663922657,0.775809948670503,0.911765658574141,0.316182685621286,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0.393117990226406,0,0,0,0,0,0.810676133875177,0,0,0,0.936113019343682,0,0,0,0.554259570499814,1.89491411770485,1.14075483509418,1.52770577197669,0.469380496577004,2.01007508930179,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.637819074629948,3.93271955317771,0.172684981865896,0,0,0,4.91764273019036,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0,0,1.21390318077491,0.906970670894253,0,0,0,0.516856586336442,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0.704015124191131,4.87213762986786,10.8058915046931,182.529082006218,153.39120536111,138.35784978519,107.31573725882,132.461706094264,0,0,0,0.82554747185289,0,0,0,0,0,0,0,12.4107180341965,1.73984796469624,17.2821547057821,29.8094740668171,42.2358357949227,40.615436856789,28.7261057799668,30.747085529825,19.6316956488022,0,6.21339313086926,0,0,0,0,0,0,0,1.43224823328345,0,0,0.576060012515731,9.48033361884535,30.4087822935246,52.2798771968971,47.2911795639174,23.9895772194425,26.225938831127,12.1397404015169,14.325884135934,8.88504759543699,10.36412570508,6.65452821903147,8.47883562435846,10.2946670555153,10.6357980985228,73.6873746749437,0,0,0,69.1618746635242,0.187682475451182,1.28206136987086,133.1227634081,7.52358156053045,0,0,0,0,0,0,0,0,0,0,5.91587881229807,10.7736715818278,4.95127456686989,10.6966955510049,4.82110274044359,9.92754945630076,8.22312892865976,6.79915688888351,11.5530915453053,8.84440241173291,8.61829619626815,8.86543804514558,13.8589431055426,12.6129550237592,15.737318493838,9.0495801343784,9.03897742369873,9.83837024364896,5.76920261124629,7.50714492685426,9.60033906679163,12.0683548188349,10.9680647375768,9.59286349773368,8.37573485696442,10.8306698101346,9.14639864363863,9.47050961176234,10.5927208799772,2.80571135828869,6.76219603307793,9.1609168609274,6.13846564754534,8.6764631064141,17.747408210265,13.4897712086491,16.3752125911786,22.9912027831679,7.65153328275374,10.1472052794977,0.927471342481686|short_description=p1@Trp63}} | ||
|EntrezGene=22061 | |||
|HGNC= | |||
|MCL_coexpression_id=65 | |||
|UniProt=O88898,Q569E5,Q3UVI3,Q5CZX0 | |||
|association_with_transcript=0bp_to_ENSMUST00000040231,ENSMUST00000115304,ENSMUST00000115305,ENSMUST00000115306,NM_001127262,NM_001127263,NM_001127264,NM_001127265,NM_011641,uc007yur.2,uc007yus.2,uc007yut.2,uc007yuu.2,uc007yuv.2,uc007yuw.2_5end | |||
|description=CAGE_peak_1_at_Trp63_5end | |||
|id=chr16:25801993..25802014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.33e-08!23;UBERON:0001004!4.35e-07!42;UBERON:0000065!8.44e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.20e-13,43;UBERON:0003102,3.45e-11,22;UBERON:0007811,1.38e-08,36;UBERON:0000072,2.13e-07,27;UBERON:0002102,3.36e-07,7;UBERON:0004710,3.36e-07,7;UBERON:0005419,3.36e-07,7;UBERON:0005417,3.36e-07,7;UBERON:0005729,3.36e-07,7;UBERON:0000014,8.73e-07,5;UBERON:0001003,8.73e-07,5;UBERON:0002097,8.73e-07,5;UBERON:0002199,8.73e-07,5;UBERON:0007029,8.73e-07,5;UBERON:0007376,8.73e-07,5;UBERON:0002416,8.73e-07,5;UBERON:0007383,8.73e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,14.9378818297738,13.1747130047051,7.58286667522175,1.7127581957859,0,0.148442139064825,0.520455980298408,0,0,0,0,0,1.23597483867187,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,5.22509276562391,11.625246887949,9.46988351489133,8.19758790665033,2.5289231487682,5.94205028357652,10.2479276128286,6.53150391852747,2.0498195245576,2.99845518591132,5.95017752699736,11.6406716183735,9.07709184805532,17.4191612922309,17.3164628617784,35.3120006516509,40.7455034830935,57.6189981942242,0,0,0,0,0,0.703578179943289,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.644337306610467,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,1.01825663922657,0.775809948670503,0.911765658574141,0.316182685621286,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0.393117990226406,0,0,0,0,0,0.810676133875177,0,0,0,0.936113019343682,0,0,0,0.554259570499814,1.89491411770485,1.14075483509418,1.52770577197669,0.469380496577004,2.01007508930179,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.637819074629948,3.93271955317771,0.172684981865896,0,0,0,4.91764273019036,9.93372286697037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,0,0,1.21390318077491,0.906970670894253,0,0,0,0.516856586336442,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0.704015124191131,4.87213762986786,10.8058915046931,182.529082006218,153.39120536111,138.35784978519,107.31573725882,132.461706094264,0,0,0,0.82554747185289,0,0,0,0,0,0,0,12.4107180341965,1.73984796469624,17.2821547057821,29.8094740668171,42.2358357949227,40.615436856789,28.7261057799668,30.747085529825,19.6316956488022,0,6.21339313086926,0,0,0,0,0,0,0,1.43224823328345,0,0,0.576060012515731,9.48033361884535,30.4087822935246,52.2798771968971,47.2911795639174,23.9895772194425,26.225938831127,12.1397404015169,14.325884135934,8.88504759543699,10.36412570508,6.65452821903147,8.47883562435846,10.2946670555153,10.6357980985228,73.6873746749437,0,0,0,69.1618746635242,0.187682475451182,1.28206136987086,133.1227634081,7.52358156053045,0,0,0,0,0,0,0,0,0,0,5.91587881229807,10.7736715818278,4.95127456686989,10.6966955510049,4.82110274044359,9.92754945630076,8.22312892865976,6.79915688888351,11.5530915453053,8.84440241173291,8.61829619626815,8.86543804514558,13.8589431055426,12.6129550237592,15.737318493838,9.0495801343784,9.03897742369873,9.83837024364896,5.76920261124629,7.50714492685426,9.60033906679163,12.0683548188349,10.9680647375768,9.59286349773368,8.37573485696442,10.8306698101346,9.14639864363863,9.47050961176234,10.5927208799772,2.80571135828869,6.76219603307793,9.1609168609274,6.13846564754534,8.6764631064141,17.747408210265,13.4897712086491,16.3752125911786,22.9912027831679,7.65153328275374,10.1472052794977,0.927471342481686 | |||
|short_description=p1@Trp63 | |||
}} |
Revision as of 12:20, 13 September 2013
Short description: | p1@Trp63 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trp63_5end |
Coexpression cluster: | MCL_coexpression_mm9:65 |
Association with transcript: | 0bp_to_ENSMUST00000040231, ENSMUST00000115304, ENSMUST00000115305, ENSMUST00000115306, NM_001127262, NM_001127263, NM_001127264, NM_001127265, NM_011641, uc007yur.2, uc007yus.2, uc007yut.2, uc007yuu.2, uc007yuv.2, uc007yuw.2_5end |
EntrezGene: | Trp63 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.20e-13 | 43 |
surface structure | 3.45e-11 | 22 |
craniocervical region | 1.38e-08 | 36 |
segment of respiratory tract | 2.13e-07 | 27 |
forelimb | 3.36e-07 | 7 |
pectoral appendage | 3.36e-07 | 7 |
pectoral appendage bud | 3.36e-07 | 7 |
forelimb bud | 3.36e-07 | 7 |
forelimb/pectoral fin field | 3.36e-07 | 7 |
zone of skin | 8.73e-07 | 5 |
skin epidermis | 8.73e-07 | 5 |
skin of body | 8.73e-07 | 5 |
integument | 8.73e-07 | 5 |
surface | 8.73e-07 | 5 |
outer epithelium | 8.73e-07 | 5 |
integumental system | 8.73e-07 | 5 |
enveloping layer of ectoderm | 8.73e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.