FFCP PHASE1:Mm9::chr16:32751423..32751440,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=736|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:32751423..32751440,+|id=chr16:32751423..32751440,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.47e-14,3;CL:0002202,1.47e-14,3;CL:0000069,1.47e-14,3;CL:0002632,1.47e-14,3;CL:0002368,1.47e-14,3;CL:0000307,1.47e-14,3;CL:0000377,1.47e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.12e-14!17;UBERON:0005181!2.12e-14!17;UBERON:0002224!2.12e-14!17;UBERON:0000915!2.12e-14!17;UBERON:0008947!2.12e-14!17;UBERON:0003258!2.12e-14!17;UBERON:0002048!1.40e-10!14;UBERON:0000117!1.40e-10!14;UBERON:0000171!1.40e-10!14;UBERON:0000170!1.40e-10!14;UBERON:0005597!1.40e-10!14;UBERON:0000118!1.40e-10!14;UBERON:0004119!6.29e-10!130;UBERON:0000925!6.29e-10!130;UBERON:0006595!6.29e-10!130;UBERON:0005153!7.18e-10!17;UBERON:0001007!1.46e-09!128;UBERON:0001555!1.46e-09!128;UBERON:0007026!1.46e-09!128;UBERON:0004921!1.63e-08!126;UBERON:0004185!1.63e-08!126;UBERON:0005409!3.21e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.47e-14,3;UBERON:0001005,1.47e-14,3;UBERON:0007196,1.47e-14,3;UBERON:0001558,1.47e-14,3;UBERON:0005178,1.08e-11,17;UBERON:0005181,1.08e-11,17;UBERON:0002224,1.08e-11,17;UBERON:0000915,1.08e-11,17;UBERON:0008947,1.08e-11,17;UBERON:0003258,1.08e-11,17;UBERON:0001155,9.09e-10,2;UBERON:0000059,9.09e-10,2;UBERON:0004921,6.56e-07,114;UBERON:0001007,9.64e-07,116;UBERON:0001555,9.64e-07,116;UBERON:0007026,9.64e-07,116|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0,0,0,0,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3915699685383,9.12095515710355,11.1215377903252,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73574412652416,0,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0.0937017245597288,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,4.32276099749388,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.788175720530955,1.10732344824387,1.59454768657487,1.3109065177259,3.45369963731791,0.289298117163023,0,0,0,1.37968373152366,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,1.81467135269789,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,1.51207477150522,1.46361807210128,1.74690050996942,1.34864346384821,0.247960367176008,0.26175594198403,1.94422459937689,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,9.70703608616505,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr16:32751423..32751440,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=736 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:32751423..32751440,+ | |||
|id=chr16:32751423..32751440,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.47e-14,3;CL:0002202,1.47e-14,3;CL:0000069,1.47e-14,3;CL:0002632,1.47e-14,3;CL:0002368,1.47e-14,3;CL:0000307,1.47e-14,3;CL:0000377,1.47e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.12e-14!17;UBERON:0005181!2.12e-14!17;UBERON:0002224!2.12e-14!17;UBERON:0000915!2.12e-14!17;UBERON:0008947!2.12e-14!17;UBERON:0003258!2.12e-14!17;UBERON:0002048!1.40e-10!14;UBERON:0000117!1.40e-10!14;UBERON:0000171!1.40e-10!14;UBERON:0000170!1.40e-10!14;UBERON:0005597!1.40e-10!14;UBERON:0000118!1.40e-10!14;UBERON:0004119!6.29e-10!130;UBERON:0000925!6.29e-10!130;UBERON:0006595!6.29e-10!130;UBERON:0005153!7.18e-10!17;UBERON:0001007!1.46e-09!128;UBERON:0001555!1.46e-09!128;UBERON:0007026!1.46e-09!128;UBERON:0004921!1.63e-08!126;UBERON:0004185!1.63e-08!126;UBERON:0005409!3.21e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.47e-14,3;UBERON:0001005,1.47e-14,3;UBERON:0007196,1.47e-14,3;UBERON:0001558,1.47e-14,3;UBERON:0005178,1.08e-11,17;UBERON:0005181,1.08e-11,17;UBERON:0002224,1.08e-11,17;UBERON:0000915,1.08e-11,17;UBERON:0008947,1.08e-11,17;UBERON:0003258,1.08e-11,17;UBERON:0001155,9.09e-10,2;UBERON:0000059,9.09e-10,2;UBERON:0004921,6.56e-07,114;UBERON:0001007,9.64e-07,116;UBERON:0001555,9.64e-07,116;UBERON:0007026,9.64e-07,116 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0,0,0,0,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3915699685383,9.12095515710355,11.1215377903252,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73574412652416,0,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0.0937017245597288,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,4.32276099749388,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.788175720530955,1.10732344824387,1.59454768657487,1.3109065177259,3.45369963731791,0.289298117163023,0,0,0,1.37968373152366,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,1.81467135269789,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,1.51207477150522,1.46361807210128,1.74690050996942,1.34864346384821,0.247960367176008,0.26175594198403,1.94422459937689,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,9.70703608616505,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr16:32751423..32751440,+ | |||
}} |
Revision as of 12:27, 13 September 2013
Short description: | p@chr16:32751423..32751440, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:32751423..32751440, + |
Coexpression cluster: | MCL_coexpression_mm9:736 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.47e-14 | 3 |
epithelial cell of tracheobronchial tree | 1.47e-14 | 3 |
branched duct epithelial cell | 1.47e-14 | 3 |
epithelial cell of lower respiratory tract | 1.47e-14 | 3 |
respiratory epithelial cell | 1.47e-14 | 3 |
tracheal epithelial cell | 1.47e-14 | 3 |
tracheoblast | 1.47e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.47e-14 | 3 |
respiratory airway | 1.47e-14 | 3 |
tracheobronchial tree | 1.47e-14 | 3 |
lower respiratory tract | 1.47e-14 | 3 |
thoracic cavity element | 1.08e-11 | 17 |
thoracic segment organ | 1.08e-11 | 17 |
thoracic cavity | 1.08e-11 | 17 |
thoracic segment of trunk | 1.08e-11 | 17 |
respiratory primordium | 1.08e-11 | 17 |
endoderm of foregut | 1.08e-11 | 17 |
colon | 9.09e-10 | 2 |
large intestine | 9.09e-10 | 2 |
subdivision of digestive tract | 6.56e-07 | 114 |
digestive system | 9.64e-07 | 116 |
digestive tract | 9.64e-07 | 116 |
primitive gut | 9.64e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.