FFCP PHASE1:Mm9::chr17:17585824..17585848,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66643|HGNC=|MCL_coexpression_id=79|UniProt=Q3TSN5|association_with_transcript=40bp_to_ENSMUST00000140134,uc008aph.1_5end|description=CAGE_peak_3_at_Lix1_5end|id=chr17:17585824..17585848,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!3.82e-10!43;UBERON:0007100!3.36e-09!18;UBERON:0000948!3.36e-09!18;UBERON:0005498!3.36e-09!18;UBERON:0004140!3.36e-09!18;UBERON:0009881!3.36e-09!18;UBERON:0004141!3.36e-09!18;UBERON:0003084!3.36e-09!18;UBERON:0007005!3.36e-09!18;UBERON:0004139!3.36e-09!18;UBERON:0004291!3.36e-09!18;UBERON:0000468!3.05e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.18e-11,18;UBERON:0000948,1.18e-11,18;UBERON:0005498,1.18e-11,18;UBERON:0004140,1.18e-11,18;UBERON:0009881,1.18e-11,18;UBERON:0004141,1.18e-11,18;UBERON:0003084,1.18e-11,18;UBERON:0007005,1.18e-11,18;UBERON:0004139,1.18e-11,18;UBERON:0004291,1.18e-11,18;UBERON:0004535,8.13e-10,23;UBERON:0001009,8.13e-10,23;UBERON:0003103,8.81e-09,43;UBERON:0010314,2.04e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.42825492201902,0.220868540951614,0,0,0,2.20231761998777,0.638436690425939,1.0752457327937,0.527545150920775,0.731901148819277,0,1.3959149950069,1.12552522006336,1.06958773443767,0.589257170947335,0.996601765593721,0.372798891650601,0.151452386666368,0.982430281388212,0,0,0,0,0,0,0.702222100658759,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,2.43572382649713,1.15307748628029,1.50722640552623,1.29347577849275,1.0053327306374,0,6.07317299063629,0,0.323533699894818,1.10420759230197,0.484875253135222,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.49790639404823,0.915001205637253,0.125654352112864,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,3.53811861807145,0.841767423545896,1.69156575851515,0.689706313300419,0.900310649026746,1.05493372485001,0.272145996605311,0.12811372028485,0.655912071918102,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,1.09597866213787,0,0,0,0,0,0,0,1.44988040774851,1.17263029990548,0.720248245844059,1.89395788468168,1.18058539048442,1.23413690309903,2.09280550275367,1.60964040839772,2.10177616260905,2.79751744852917,4.59668899421467,4.37771571547621,4.9707995724613,5.26920276698522,4.42881181909227,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.948339504765408,0.571242563048644,0,0.203651327845314,0.387904974335251,0.561086559122548,1.39120381673366,1.62371162777562,2.19798218977925,0.987177311374404,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,1.84753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,1.3109065177259,0.863424909329478,1.3018415272336,0,0,1.47529281905711,1.10374698521893,2.0871576698413,1.40654023910644,0,3.7870639080656,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,1.41940085208269,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.7235168460303,0.900305470156551,0.388076051348264,0.857348140126369,1.06404140185364,1.24858172321449,0.493647061806363,0.913394847343798,0,0.21183207086382,0.220528398054962,0.32977250588296,0.645857706783622,0.301564624640779,0.119372344003136,0,0,1.29797711407357,0,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,1.04702376793612,0.129614973291793,0,0,0.299033092087958,0.827292452285488,0.388902376688095,0.516639293910924,1.18269287843545,0.938857909166032,0.5208175393758,0.734015410979976,0.724752362478018,0.288030006257865,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.19318959403219,0.563047426353546,2.38097111547445,0.214368379079066,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,0,0.518936737920883,0.399024873401031,0,0.243106717068294,0.419226325255965,0.551530525350042,1.55572709461131,1.03017528619447,1.60459604795908,1.26348605881899,2.28131369901216,1.13175804831646,1.21733959710847,1.21647789569252,0.91896750328981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| ||
|EntrezGene=66643 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|UniProt=Q3TSN5 | |||
|association_with_transcript=40bp_to_ENSMUST00000140134,uc008aph.1_5end | |||
|description=CAGE_peak_3_at_Lix1_5end | |||
|id=chr17:17585824..17585848,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!3.82e-10!43;UBERON:0007100!3.36e-09!18;UBERON:0000948!3.36e-09!18;UBERON:0005498!3.36e-09!18;UBERON:0004140!3.36e-09!18;UBERON:0009881!3.36e-09!18;UBERON:0004141!3.36e-09!18;UBERON:0003084!3.36e-09!18;UBERON:0007005!3.36e-09!18;UBERON:0004139!3.36e-09!18;UBERON:0004291!3.36e-09!18;UBERON:0000468!3.05e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.18e-11,18;UBERON:0000948,1.18e-11,18;UBERON:0005498,1.18e-11,18;UBERON:0004140,1.18e-11,18;UBERON:0009881,1.18e-11,18;UBERON:0004141,1.18e-11,18;UBERON:0003084,1.18e-11,18;UBERON:0007005,1.18e-11,18;UBERON:0004139,1.18e-11,18;UBERON:0004291,1.18e-11,18;UBERON:0004535,8.13e-10,23;UBERON:0001009,8.13e-10,23;UBERON:0003103,8.81e-09,43;UBERON:0010314,2.04e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.42825492201902,0.220868540951614,0,0,0,2.20231761998777,0.638436690425939,1.0752457327937,0.527545150920775,0.731901148819277,0,1.3959149950069,1.12552522006336,1.06958773443767,0.589257170947335,0.996601765593721,0.372798891650601,0.151452386666368,0.982430281388212,0,0,0,0,0,0,0.702222100658759,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,2.43572382649713,1.15307748628029,1.50722640552623,1.29347577849275,1.0053327306374,0,6.07317299063629,0,0.323533699894818,1.10420759230197,0.484875253135222,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.49790639404823,0.915001205637253,0.125654352112864,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,3.53811861807145,0.841767423545896,1.69156575851515,0.689706313300419,0.900310649026746,1.05493372485001,0.272145996605311,0.12811372028485,0.655912071918102,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,1.09597866213787,0,0,0,0,0,0,0,1.44988040774851,1.17263029990548,0.720248245844059,1.89395788468168,1.18058539048442,1.23413690309903,2.09280550275367,1.60964040839772,2.10177616260905,2.79751744852917,4.59668899421467,4.37771571547621,4.9707995724613,5.26920276698522,4.42881181909227,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.948339504765408,0.571242563048644,0,0.203651327845314,0.387904974335251,0.561086559122548,1.39120381673366,1.62371162777562,2.19798218977925,0.987177311374404,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,1.84753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,1.3109065177259,0.863424909329478,1.3018415272336,0,0,1.47529281905711,1.10374698521893,2.0871576698413,1.40654023910644,0,3.7870639080656,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,1.41940085208269,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.7235168460303,0.900305470156551,0.388076051348264,0.857348140126369,1.06404140185364,1.24858172321449,0.493647061806363,0.913394847343798,0,0.21183207086382,0.220528398054962,0.32977250588296,0.645857706783622,0.301564624640779,0.119372344003136,0,0,1.29797711407357,0,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,1.04702376793612,0.129614973291793,0,0,0.299033092087958,0.827292452285488,0.388902376688095,0.516639293910924,1.18269287843545,0.938857909166032,0.5208175393758,0.734015410979976,0.724752362478018,0.288030006257865,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.19318959403219,0.563047426353546,2.38097111547445,0.214368379079066,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,0,0.518936737920883,0.399024873401031,0,0.243106717068294,0.419226325255965,0.551530525350042,1.55572709461131,1.03017528619447,1.60459604795908,1.26348605881899,2.28131369901216,1.13175804831646,1.21733959710847,1.21647789569252,0.918967503289812,1.42888107384922,0.695305955669133,0.77163688185482,0.412085900803307,1.17759136107518,1.02860775715625,1.95223386775271,1.43061713968393,1.16277133305863,0.941093804153306,0.930760686808441,2.37806364734604,1.31534855718921,1.35804113845862,0.561142271657738,0.474540072496697,0.788035859004508,0,0.309873682371932,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,1.53030665655075,1.10295709559758,3.01428186306548 | |||
|short_description=p3@Lix1 | |||
}} |
Revision as of 13:36, 13 September 2013
Short description: | p3@Lix1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lix1_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 40bp_to_ENSMUST00000140134, uc008aph.1_5end |
EntrezGene: | Lix1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.18e-11 | 18 |
heart | 1.18e-11 | 18 |
primitive heart tube | 1.18e-11 | 18 |
primary heart field | 1.18e-11 | 18 |
anterior lateral plate mesoderm | 1.18e-11 | 18 |
heart tube | 1.18e-11 | 18 |
heart primordium | 1.18e-11 | 18 |
cardiac mesoderm | 1.18e-11 | 18 |
cardiogenic plate | 1.18e-11 | 18 |
heart rudiment | 1.18e-11 | 18 |
cardiovascular system | 8.13e-10 | 23 |
circulatory system | 8.13e-10 | 23 |
compound organ | 8.81e-09 | 43 |
structure with developmental contribution from neural crest | 2.04e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.