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FFCP PHASE1:Mm9::chr17:34742809..34742826,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=55979|HGNC=|UniProt=O35083,E9PY97,G3UY51,Q91VJ9|association_with_transcript=3bp_to_ENSMUST00000037489,ENSMUST00000169278,ENSMUST00000173973,NM_001163379,uc008ccz.2_5end|description=CAGE_peak_2_at_Agpat1_5end|id=chr17:34742809..34742826,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.70e-13!75;UBERON:0001016!1.70e-13!75;UBERON:0001017!1.32e-12!73;UBERON:0005743!1.32e-12!73;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0000955!4.20e-12!50;UBERON:0006238!4.20e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0007023!4.04e-11!51;UBERON:0002020!1.87e-10!34;UBERON:0004121!8.74e-10!102;UBERON:0000924!8.74e-10!102;UBERON:0006601!8.74e-10!102;UBERON:0002791!5.13e-09!29;UBERON:0003528!5.13e-09!29;UBERON:0001893!5.13e-09!29;UBERON:0003080!1.04e-08!40;UBERON:0002780!2.42e-08!39;UBERON:0001890!2.42e-08!39;UBERON:0006240!2.42e-08!39;UBERON:0000033!2.66e-08!63;UBERON:0002346!1.90e-07!71;UBERON:0003075!1.90e-07!71;UBERON:0007284!1.90e-07!71;UBERON:0000956!8.34e-07!21;UBERON:0001869!8.34e-07!21;UBERON:0000203!8.34e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.70e-13,75;UBERON:0000073,3.51e-13,54;UBERON:0001017,1.32e-12,73;UBERON:0001049,2.15e-12,52;UBERON:0005068,2.15e-12,52;UBERON:0006241,2.15e-12,52;UBERON:0007135,2.15e-12,52;UBERON:0007023,4.06e-11,51;UBERON:0000955,7.58e-11,47;UBERON:0006238,7.58e-11,47;UBERON:0002020,1.87e-10,34;UBERON:0002616,2.07e-10,46;UBERON:0004121,6.38e-10,95;UBERON:0000924,6.38e-10,95;UBERON:0006601,6.38e-10,95;UBERON:0003528,5.13e-09,29;UBERON:0002791,5.13e-09,29;UBERON:0001893,5.13e-09,29;UBERON:0003080,1.04e-08,40;UBERON:0002780,2.42e-08,39;UBERON:0001890,2.42e-08,39;UBERON:0006240,2.42e-08,39;UBERON:0002346,1.08e-07,64;UBERON:0003075,1.08e-07,64;UBERON:0007284,1.08e-07,64;UBERON:0000956,8.34e-07,21;UBERON:0001869,8.34e-07,21;UBERON:0000203,8.34e-07,21|phase1_expression=3.52327463630547,13.2610654902957,17.2899710968024,23.5922084819327,18.5331420080148,10.7442734023609,10.9797941079897,6.06879620175408,2.25261955442667,0.70219357896598,5.99262888789267,3.90883579077148,4.96482116800497,6.7313709862628,3.33109761815663,3.44207954562704,4.19737126876888,5.99378114180652,4.2505474417779,3.81950686618227,12.3312770719051,2.58156473122302,3.91799683708403,10.0795226359846,9.1763712426868,15.5042630311055,12.9228598847722,12.7128027284675,13.8717096203153,8.82105454159758,9.75614246883341,4.44521471421742,5.53558308826113,15.8481681015439,6.06588401477677,4.48833542467929,3.87921776898501,5.4409111995798,2.3440060335714,1.57057123192139,8.82347232046521,4.78131839470912,8.73918635456076,3.52511090331616,5.06884656097573,6.24058957349717,19.559783608701,8.50298109883741,8.12838876117546,8.74934545834275,5.45947044338914,12.9377307928474,5.20126078778983,6.5282592781021,6.38578218370682,10.2903774414379,6.87680255853016,9.7977697532714,10.1158230429799,9.52183762689659,5.07065122804943,14.2314703469035,9.78224275722253,22.0475430733943,21.7550599764734,23.4458437932213,17.3768064100675,20.3635701820424,6.42875596312561,5.94026128659439,5.46844899513593,18.2816630018434,9.27647871996777,6.00204916153275,5.07980996396653,7.35375029288017,7.70811166995721,14.5563565417114,13.2101618600369,7.38563211289086,9.5147149346506,5.73004707612436,16.1926139420801,7.87867654044352,11.1542720877071,7.07108605136802,7.68807076315156,7.64237727883732,11.0560242266449,12.9227367782603,4.63783181922684,6.0229671388697,1.3599426674155,1.61910957491345,1.29955283489534,1.79210754838934,5.89866564553358,8.69194645148094,9.35229616570328,7.42013106471715,6.90132756905734,5.13305909657271,0,28.4426681261332,3.46385665617943,6.33399663687746,4.04419556011827,4.33898742932428,3.36619248741323,6.53145411885229,3.29622120855658,4.87144765299426,6.91846491768175,5.12456977878917,4.11560474974967,6.78599593180248,10.3821886448437,7.08536848907567,7.07688441559899,3.88240439873782,3.3126227769059,3.39412677194655,11.1835056730873,6.14839673724249,5.86450779077674,10.7291963187608,1.07833612055328,2.99951365496704,1.27070227073065,10.6351353977424,18.3000241127451,6.40837195775608,11.6462294528825,11.5071955798649,13.0906468072523,11.6813709408785,1.83310854930569,4.72746488318353,10.6143558542143,5.6819301089348,1.95180664444056,3.67843367093557,3.78130472591233,3.31550599238573,2.51735046859913,1.7935920839879,5.34099829990454,3.10444044886819,4.095791865724,3.40390944302075,2.99116911078713,3.94552318369635,1.11218899690239,5.2237824978325,1.85203922767149,2.58744546864041,2.1066395619397,1.54408744268829,1.98914449576915,4.55676699578104,2.11073453982987,2.88099298337624,2.84093682702252,5.50939848892731,4.78228049950873,4.88321283975857,6.70683503499048,3.61972561338225,4.77223564749093,2.29834449710733,6.16122952548504,5.55559952216263,5.04965265169416,6.84452735677896,10.9350773253346,5.55684906848136,12.55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|EntrezGene=55979
|HGNC=
|UniProt=O35083,E9PY97,G3UY51,Q91VJ9
|association_with_transcript=3bp_to_ENSMUST00000037489,ENSMUST00000169278,ENSMUST00000173973,NM_001163379,uc008ccz.2_5end
|description=CAGE_peak_2_at_Agpat1_5end
|id=chr17:34742809..34742826,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.70e-13!75;UBERON:0001016!1.70e-13!75;UBERON:0001017!1.32e-12!73;UBERON:0005743!1.32e-12!73;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0000955!4.20e-12!50;UBERON:0006238!4.20e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0007023!4.04e-11!51;UBERON:0002020!1.87e-10!34;UBERON:0004121!8.74e-10!102;UBERON:0000924!8.74e-10!102;UBERON:0006601!8.74e-10!102;UBERON:0002791!5.13e-09!29;UBERON:0003528!5.13e-09!29;UBERON:0001893!5.13e-09!29;UBERON:0003080!1.04e-08!40;UBERON:0002780!2.42e-08!39;UBERON:0001890!2.42e-08!39;UBERON:0006240!2.42e-08!39;UBERON:0000033!2.66e-08!63;UBERON:0002346!1.90e-07!71;UBERON:0003075!1.90e-07!71;UBERON:0007284!1.90e-07!71;UBERON:0000956!8.34e-07!21;UBERON:0001869!8.34e-07!21;UBERON:0000203!8.34e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.70e-13,75;UBERON:0000073,3.51e-13,54;UBERON:0001017,1.32e-12,73;UBERON:0001049,2.15e-12,52;UBERON:0005068,2.15e-12,52;UBERON:0006241,2.15e-12,52;UBERON:0007135,2.15e-12,52;UBERON:0007023,4.06e-11,51;UBERON:0000955,7.58e-11,47;UBERON:0006238,7.58e-11,47;UBERON:0002020,1.87e-10,34;UBERON:0002616,2.07e-10,46;UBERON:0004121,6.38e-10,95;UBERON:0000924,6.38e-10,95;UBERON:0006601,6.38e-10,95;UBERON:0003528,5.13e-09,29;UBERON:0002791,5.13e-09,29;UBERON:0001893,5.13e-09,29;UBERON:0003080,1.04e-08,40;UBERON:0002780,2.42e-08,39;UBERON:0001890,2.42e-08,39;UBERON:0006240,2.42e-08,39;UBERON:0002346,1.08e-07,64;UBERON:0003075,1.08e-07,64;UBERON:0007284,1.08e-07,64;UBERON:0000956,8.34e-07,21;UBERON:0001869,8.34e-07,21;UBERON:0000203,8.34e-07,21
|phase1_expression=3.52327463630547,13.2610654902957,17.2899710968024,23.5922084819327,18.5331420080148,10.7442734023609,10.9797941079897,6.06879620175408,2.25261955442667,0.70219357896598,5.99262888789267,3.90883579077148,4.96482116800497,6.7313709862628,3.33109761815663,3.44207954562704,4.19737126876888,5.99378114180652,4.2505474417779,3.81950686618227,12.3312770719051,2.58156473122302,3.91799683708403,10.0795226359846,9.1763712426868,15.5042630311055,12.9228598847722,12.7128027284675,13.8717096203153,8.82105454159758,9.75614246883341,4.44521471421742,5.53558308826113,15.8481681015439,6.06588401477677,4.48833542467929,3.87921776898501,5.4409111995798,2.3440060335714,1.57057123192139,8.82347232046521,4.78131839470912,8.73918635456076,3.52511090331616,5.06884656097573,6.24058957349717,19.559783608701,8.50298109883741,8.12838876117546,8.74934545834275,5.45947044338914,12.9377307928474,5.20126078778983,6.5282592781021,6.38578218370682,10.2903774414379,6.87680255853016,9.7977697532714,10.1158230429799,9.52183762689659,5.07065122804943,14.2314703469035,9.78224275722253,22.0475430733943,21.7550599764734,23.4458437932213,17.3768064100675,20.3635701820424,6.42875596312561,5.94026128659439,5.46844899513593,18.2816630018434,9.27647871996777,6.00204916153275,5.07980996396653,7.35375029288017,7.70811166995721,14.5563565417114,13.2101618600369,7.38563211289086,9.5147149346506,5.73004707612436,16.1926139420801,7.87867654044352,11.1542720877071,7.07108605136802,7.68807076315156,7.64237727883732,11.0560242266449,12.9227367782603,4.63783181922684,6.0229671388697,1.3599426674155,1.61910957491345,1.29955283489534,1.79210754838934,5.89866564553358,8.69194645148094,9.35229616570328,7.42013106471715,6.90132756905734,5.13305909657271,0,28.4426681261332,3.46385665617943,6.33399663687746,4.04419556011827,4.33898742932428,3.36619248741323,6.53145411885229,3.29622120855658,4.87144765299426,6.91846491768175,5.12456977878917,4.11560474974967,6.78599593180248,10.3821886448437,7.08536848907567,7.07688441559899,3.88240439873782,3.3126227769059,3.39412677194655,11.1835056730873,6.14839673724249,5.86450779077674,10.7291963187608,1.07833612055328,2.99951365496704,1.27070227073065,10.6351353977424,18.3000241127451,6.40837195775608,11.6462294528825,11.5071955798649,13.0906468072523,11.6813709408785,1.83310854930569,4.72746488318353,10.6143558542143,5.6819301089348,1.95180664444056,3.67843367093557,3.78130472591233,3.31550599238573,2.51735046859913,1.7935920839879,5.34099829990454,3.10444044886819,4.095791865724,3.40390944302075,2.99116911078713,3.94552318369635,1.11218899690239,5.2237824978325,1.85203922767149,2.58744546864041,2.1066395619397,1.54408744268829,1.98914449576915,4.55676699578104,2.11073453982987,2.88099298337624,2.84093682702252,5.50939848892731,4.78228049950873,4.88321283975857,6.70683503499048,3.61972561338225,4.77223564749093,2.29834449710733,6.16122952548504,5.55559952216263,5.04965265169416,6.84452735677896,10.9350773253346,5.55684906848136,12.5559137533843,6.87571473325215,1.91959425481711,0.928946687441754,4.51036114627327,4.03367049246685,6.0042071838115,7.22857379227725,6.64340686162316,6.58795818896044,6.28338022000674,6.76452004939913,5.45899443933536,8.98819408654222,6.05186539649144,8.36393347668342,3.22435431620239,1.82797620175566,3.38123207019241,3.66572390121566,2.32742984601151,2.38461787627083,3.92066530170395,8.11855813887812,7.84993639206874,4.31890073726302,0.889357881261447,4.50481785433454,7.07612382407531,4.04751802292737,4.05720242777006,3.85883455603867,3.56476192493988,5.4662266115654,0.972811360650212,0.823684239564244,7.18841032636773,1.48856379067401,1.5601883655728,0.757736633841335,0.896987067609561,2.41221760681684,4.80358294433172,2.4633883530163,3.09633455239849,2.54617628662782,2.81628297946203,5.52770649557992,4.99891645860629,4.68320754858717,4.72905432318573,3.5434350343804,4.46473352240964,4.09658286789345,4.48980952851328,5.35201516751593,7.53956419696361,2.17562273527484,6.88469982226651,6.34654516500885,14.1284519189257,10.4318401067061,6.39346286969034,9.59389523376617,2.52406575533005,3.90438744296638,4.95473814785438,2.86762557543062,4.01037613348309,5.66153061577665,5.66734982344852,4.67609372658099,1.18586333383957,11.5675673911851,4.82596289708113,3.91744328067962,2.44330439030364,6.92874516484649,11.9470624505967,2.6705869977048,2.41858845571801,5.46954731292105,5.90603785761546,8.9156192903739,3.87642439752332,3.63533729477506,6.41695281092498,11.6933600436252,10.5418608574999,10.3135543248187,10.5536277783674,2.70091641046965,4.01011919726539,3.64372959553707,6.0295679438373,4.63758925765383,5.43011767986999,5.78483403317739,11.2642419870581,7.62595455109753,9.2621927183084,4.61681508236144,1.77610869365496,3.25689794612042,3.81991500810037,5.9090723908222,7.86998258900597,12.9797711407357,4.61351378154202,2.68302928352189,2.40752885580625,1.88368457004691,3.41735569302563,4.11800711771741,2.54967644990783,1.95932033253121,1.52019971184866,6.68269432610579,3.16335993581135,2.23651413839534,3.45617090629764,2.29997125615916,1.9652630737156,3.50647300600534,2.72756403893609,5.49687478166462,7.2584385043404,9.94142900939081,33.2578833823672,3.13984746692355,2.97825282822776,1.94451188344048,2.71235629303235,3.54807863530634,1.64300134104056,2.8644964665669,1.78260885523708,7.00593950395418,16.1296803504405,4.4241556887945,2.63542779877213,2.77319584345034,2.46849563657811,1.79026695667481,2.38417625737518,2.28371354087941,3.39685912501528,2.52416124870369,2.51482461961499,3.42809029465258,4.19068887180935,3.94468550725351,1.75315353272353,5.21479882314986,5.99362074109975,3.13998498133165,5.03653849092235,6.95482538515886,8.25802891985201,5.86085197655248,3.64426244434412,13.0408747049194,11.2950368523413,10.5874804396651,10.8850147553485,9.45192502890282,10.2762377965596,11.3309084608455,16.2005400055633,14.8605997063993,16.3131267234314,20.7104124700728,1.764384908931,2.79317411380722,2.90247129782028,4.37592090722929,3.98265008993166,3.67687016900028,5.33392146723877,2.88449080134452,5.13470735346904,4.80124702351215,4.56262739802432,3.9611531691076,3.37109426891577,4.22566005872137,5.11175673704958,4.76293691283074,7.18482820858104,4.62982129112892,4.53294490883637,5.2991611248383,3.42869252385415,4.61437096014278,3.09967046931517,3.77900683244054,3.85848459702856,4.39995961036718,3.65855945745545,2.63069711437843,3.93831930152999,3.92799590160417,5.10130577933949,6.30428687203606,4.09231043169689,4.95797891795091,5.40138510747196,8.74337022782811,3.74290573512653,5.58664740525576,4.97349663378993,4.85301122062934,3.94175320554716
|short_description=p2@Agpat1
}}

Revision as of 14:15, 13 September 2013

Short description:p2@Agpat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Agpat1_5end
Coexpression cluster:NA
Association with transcript: 3bp_to_ENSMUST00000037489, ENSMUST00000169278, ENSMUST00000173973, NM_001163379, uc008ccz.2_5end
EntrezGene:Agpat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Agpat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B913.87
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C817.38
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D911.06
Mouse Schwann, donor2.CNhs12573.11746-123F912.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I36.79
amnion, adult pregnant day17.5.CNhs10488.583-22A810.38
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F213.09
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G15.56
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.92
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G533.26
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E216.13
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A24.19
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.70e-1375
regional part of nervous system3.51e-1354
central nervous system1.32e-1273
neural tube2.15e-1252
neural rod2.15e-1252
future spinal cord2.15e-1252
neural keel2.15e-1252
adult organism4.06e-1151
brain7.58e-1147
future brain7.58e-1147
gray matter1.87e-1034
regional part of brain2.07e-1046
ectoderm-derived structure6.38e-1095
ectoderm6.38e-1095
presumptive ectoderm6.38e-1095
brain grey matter5.13e-0929
regional part of telencephalon5.13e-0929
telencephalon5.13e-0929
anterior neural tube1.04e-0840
regional part of forebrain2.42e-0839
forebrain2.42e-0839
future forebrain2.42e-0839
neurectoderm1.08e-0764
neural plate1.08e-0764
presumptive neural plate1.08e-0764
cerebral cortex8.34e-0721
cerebral hemisphere8.34e-0721
pallium8.34e-0721







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