FFCP PHASE1:Mm9::chr17:37383876..37383891,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000172477_5end|description=CAGE_peak_1_at_ENSMUST00000172477_5end|id=chr17:37383876..37383891,+|ontology_enrichment_celltype=CL:0000553!1.46e-08!6;CL:0000556!1.46e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000815,8.42e-10,1;CL:0000792,8.42e-10,1;CL:0000050,1.20e-09,9;CL:0002031,5.60e-09,25;CL:0000988,5.10e-07,32;CL:0002032,5.10e-07,32;CL:0000037,5.10e-07,32;CL:0000837,5.10e-07,32;CL:0000839,7.57e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.23e-09!51;UBERON:0002193!3.62e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001044,5.62e-10,1;UBERON:0001736,5.62e-10,1;UBERON:0003293,5.62e-10,1;UBERON:0003294,5.62e-10,1;UBERON:0001829,5.62e-10,1;UBERON:0010047,5.62e-10,1;UBERON:0000167,5.62e-10,1;UBERON:0006298,5.62e-10,1|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,5.99378114180652,5.62169177783529,5.94145512517242,0,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,21.7507822263624,0.29688427812965,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,1.47529281905711,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0,3.75915937755276,0,0,0,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.577271049841977,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000172477}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENSMUST00000172477_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000172477_5end | |||
|id=chr17:37383876..37383891,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.46e-08!6;CL:0000556!1.46e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000815,8.42e-10,1;CL:0000792,8.42e-10,1;CL:0000050,1.20e-09,9;CL:0002031,5.60e-09,25;CL:0000988,5.10e-07,32;CL:0002032,5.10e-07,32;CL:0000037,5.10e-07,32;CL:0000837,5.10e-07,32;CL:0000839,7.57e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.23e-09!51;UBERON:0002193!3.62e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001044,5.62e-10,1;UBERON:0001736,5.62e-10,1;UBERON:0003293,5.62e-10,1;UBERON:0003294,5.62e-10,1;UBERON:0001829,5.62e-10,1;UBERON:0010047,5.62e-10,1;UBERON:0000167,5.62e-10,1;UBERON:0006298,5.62e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,5.99378114180652,5.62169177783529,5.94145512517242,0,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,21.7507822263624,0.29688427812965,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,1.47529281905711,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0,3.75915937755276,0,0,0,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.577271049841977,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000172477 | |||
}} |
Revision as of 14:31, 13 September 2013
Short description: | p1@ENSMUST00000172477 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000172477_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -14bp_to_ENSMUST00000172477_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.68e-14 | 6 |
megakaryocyte | 3.68e-14 | 6 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
regulatory T cell | 8.42e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.42e-10 | 1 |
megakaryocyte-erythroid progenitor cell | 1.20e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 5.60e-09 | 25 |
hematopoietic cell | 5.10e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.10e-07 | 32 |
hematopoietic stem cell | 5.10e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.10e-07 | 32 |
myeloid lineage restricted progenitor cell | 7.57e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
saliva-secreting gland | 5.62e-10 | 1 |
submandibular gland | 5.62e-10 | 1 |
gland of oral region | 5.62e-10 | 1 |
gland of foregut | 5.62e-10 | 1 |
major salivary gland | 5.62e-10 | 1 |
oral gland | 5.62e-10 | 1 |
oral cavity | 5.62e-10 | 1 |
submandibular gland primordium | 5.62e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.