FFCP PHASE1:Mm9::chr17:85082424..85082429,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67470|HGNC=|MCL_coexpression_id=24|UniProt=Q9DBM0|association_with_transcript=-31bp_to_ENSMUST00000045714_5end|description=CAGE_peak_7_at_Abcg8_5end|id=chr17:85082424..85082429,+|ontology_enrichment_celltype=CL:0000239!3.72e-09!6;CL:0000677!3.72e-09!6;CL:0000212!3.72e-09!6;CL:0000584!3.72e-09!6;CL:0002563!5.95e-08!9;CL:0002251!5.95e-08!9;CL:0000075!9.13e-08!7;CL:0000066!1.11e-07!25;CL:0000473!6.47e-07!3;CL:0000627!6.47e-07!3;CL:0000682!6.47e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,3.86e-11,3;CL:0000239,7.74e-11,6;CL:0000677,7.74e-11,6;CL:0000584,7.74e-11,6;CL:0000075,2.71e-09,7;CL:0002563,3.15e-07,9;CL:0002251,3.15e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.38e-20!43;UBERON:0000344!8.53e-18!15;UBERON:0005409!1.68e-15!59;UBERON:0001242!1.34e-14!13;UBERON:0000060!1.34e-14!13;UBERON:0001262!1.34e-14!13;UBERON:0004786!1.34e-14!13;UBERON:0001007!5.20e-13!128;UBERON:0001555!5.20e-13!128;UBERON:0007026!5.20e-13!128;UBERON:0004119!1.13e-12!130;UBERON:0000925!1.13e-12!130;UBERON:0006595!1.13e-12!130;UBERON:0004921!2.42e-11!126;UBERON:0004185!2.42e-11!126;UBERON:0004923!5.19e-10!24;UBERON:0003350!5.95e-08!9;UBERON:0004808!5.95e-08!9;UBERON:0001277!5.95e-08!9;UBERON:0000331!6.77e-07!3;UBERON:0002116!6.77e-07!3;UBERON:0001204!6.77e-07!3;UBERON:0001168!6.77e-07!3;UBERON:0002107!8.82e-07!22;UBERON:0007499!8.82e-07!22;UBERON:0006925!8.82e-07!22;UBERON:0009497!8.82e-07!22;UBERON:0000015!8.82e-07!22;UBERON:0002423!8.82e-07!22;UBERON:0006235!8.82e-07!22;UBERON:0008835!8.82e-07!22;UBERON:0003894!8.82e-07!22;UBERON:0004161!8.82e-07!22;UBERON:0008836!8.82e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-31,31;UBERON:0005409,1.63e-19,47;UBERON:0000344,3.05e-15,15;UBERON:0001242,6.87e-14,13;UBERON:0001262,6.87e-14,13;UBERON:0004786,6.87e-14,13;UBERON:0001007,2.35e-11,116;UBERON:0001555,2.35e-11,116;UBERON:0007026,2.35e-11,116;UBERON:0004119,4.28e-11,118;UBERON:0000925,4.28e-11,118;UBERON:0006595,4.28e-11,118;UBERON:0004921,2.26e-10,114;UBERON:0004923,4.53e-09,24;UBERON:0002108,5.64e-09,4;UBERON:0003350,3.15e-07,9;UBERON:0004808,3.15e-07,9;UBERON:0001277,3.15e-07,9|phase1_expression=0,7.32848356042658,4.09499315450582,9.0739263392049,8.01433167914156,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,3.44539178469012,1.29228598847722,1.939241094173,4.75058548640935,2.52030129759931,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,2.11560453330835,0,0,0,0,0,0.380451252225118,1.89811624617805,1.15289268306808,2.01068167040216,1.59165177632921,0.974820435595601,2.69645822596266,3.6743468478698,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,2.60498663367952,0.624075346229121,1.26289438973556,1.07638448113147,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p7@Abcg8}} | ||
|EntrezGene=67470 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q9DBM0 | |||
|association_with_transcript=-31bp_to_ENSMUST00000045714_5end | |||
|description=CAGE_peak_7_at_Abcg8_5end | |||
|id=chr17:85082424..85082429,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.72e-09!6;CL:0000677!3.72e-09!6;CL:0000212!3.72e-09!6;CL:0000584!3.72e-09!6;CL:0002563!5.95e-08!9;CL:0002251!5.95e-08!9;CL:0000075!9.13e-08!7;CL:0000066!1.11e-07!25;CL:0000473!6.47e-07!3;CL:0000627!6.47e-07!3;CL:0000682!6.47e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.86e-11,3;CL:0000239,7.74e-11,6;CL:0000677,7.74e-11,6;CL:0000584,7.74e-11,6;CL:0000075,2.71e-09,7;CL:0002563,3.15e-07,9;CL:0002251,3.15e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.38e-20!43;UBERON:0000344!8.53e-18!15;UBERON:0005409!1.68e-15!59;UBERON:0001242!1.34e-14!13;UBERON:0000060!1.34e-14!13;UBERON:0001262!1.34e-14!13;UBERON:0004786!1.34e-14!13;UBERON:0001007!5.20e-13!128;UBERON:0001555!5.20e-13!128;UBERON:0007026!5.20e-13!128;UBERON:0004119!1.13e-12!130;UBERON:0000925!1.13e-12!130;UBERON:0006595!1.13e-12!130;UBERON:0004921!2.42e-11!126;UBERON:0004185!2.42e-11!126;UBERON:0004923!5.19e-10!24;UBERON:0003350!5.95e-08!9;UBERON:0004808!5.95e-08!9;UBERON:0001277!5.95e-08!9;UBERON:0000331!6.77e-07!3;UBERON:0002116!6.77e-07!3;UBERON:0001204!6.77e-07!3;UBERON:0001168!6.77e-07!3;UBERON:0002107!8.82e-07!22;UBERON:0007499!8.82e-07!22;UBERON:0006925!8.82e-07!22;UBERON:0009497!8.82e-07!22;UBERON:0000015!8.82e-07!22;UBERON:0002423!8.82e-07!22;UBERON:0006235!8.82e-07!22;UBERON:0008835!8.82e-07!22;UBERON:0003894!8.82e-07!22;UBERON:0004161!8.82e-07!22;UBERON:0008836!8.82e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.07e-31,31;UBERON:0005409,1.63e-19,47;UBERON:0000344,3.05e-15,15;UBERON:0001242,6.87e-14,13;UBERON:0001262,6.87e-14,13;UBERON:0004786,6.87e-14,13;UBERON:0001007,2.35e-11,116;UBERON:0001555,2.35e-11,116;UBERON:0007026,2.35e-11,116;UBERON:0004119,4.28e-11,118;UBERON:0000925,4.28e-11,118;UBERON:0006595,4.28e-11,118;UBERON:0004921,2.26e-10,114;UBERON:0004923,4.53e-09,24;UBERON:0002108,5.64e-09,4;UBERON:0003350,3.15e-07,9;UBERON:0004808,3.15e-07,9;UBERON:0001277,3.15e-07,9 | |||
|phase1_expression=0,7.32848356042658,4.09499315450582,9.0739263392049,8.01433167914156,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,3.44539178469012,1.29228598847722,1.939241094173,4.75058548640935,2.52030129759931,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,2.11560453330835,0,0,0,0,0,0.380451252225118,1.89811624617805,1.15289268306808,2.01068167040216,1.59165177632921,0.974820435595601,2.69645822596266,3.6743468478698,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,2.60498663367952,0.624075346229121,1.26289438973556,1.07638448113147,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p7@Abcg8 | |||
}} |
Revision as of 15:30, 13 September 2013
Short description: | p7@Abcg8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Abcg8_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -31bp_to_ENSMUST00000045714_5end |
EntrezGene: | Abcg8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.86e-11 | 3 |
brush border epithelial cell | 7.74e-11 | 6 |
gut absorptive cell | 7.74e-11 | 6 |
enterocyte | 7.74e-11 | 6 |
columnar/cuboidal epithelial cell | 2.71e-09 | 7 |
intestinal epithelial cell | 3.15e-07 | 9 |
epithelial cell of alimentary canal | 3.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.07e-31 | 31 |
gastrointestinal system | 1.63e-19 | 47 |
mucosa | 3.05e-15 | 15 |
intestinal mucosa | 6.87e-14 | 13 |
wall of intestine | 6.87e-14 | 13 |
gastrointestinal system mucosa | 6.87e-14 | 13 |
digestive system | 2.35e-11 | 116 |
digestive tract | 2.35e-11 | 116 |
primitive gut | 2.35e-11 | 116 |
endoderm-derived structure | 4.28e-11 | 118 |
endoderm | 4.28e-11 | 118 |
presumptive endoderm | 4.28e-11 | 118 |
subdivision of digestive tract | 2.26e-10 | 114 |
organ component layer | 4.53e-09 | 24 |
small intestine | 5.64e-09 | 4 |
epithelium of mucosa | 3.15e-07 | 9 |
gastrointestinal system epithelium | 3.15e-07 | 9 |
intestinal epithelium | 3.15e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.