FFCP PHASE1:Mm9::chr17:89191347..89191362,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16867|HGNC=|MCL_coexpression_id=357|UniProt=P30730|association_with_transcript=-31bp_to_ENSMUST00000024916,NM_013582,uc008dvu.1,uc008dvv.1,uc008dvw.1_5end|description=CAGE_peak_2_at_Lhcgr_5end|id=chr17:89191347..89191362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.11e-13!18;UBERON:0005564!1.11e-13!18;UBERON:0004176!7.11e-13!17;UBERON:0009196!7.11e-13!17;UBERON:0009117!7.11e-13!17;UBERON:0005156!3.89e-12!26;UBERON:0000990!3.89e-12!26;UBERON:0003133!4.47e-11!24;UBERON:0000473!1.29e-10!14;UBERON:0003101!9.28e-10!16;UBERON:0000079!9.28e-10!16;UBERON:0003135!1.52e-09!15|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.13e-32,18;UBERON:0005564,9.13e-32,18;UBERON:0000473,1.33e-29,14;UBERON:0004176,6.64e-29,17;UBERON:0009196,6.64e-29,17;UBERON:0009117,6.64e-29,17;UBERON:0005156,1.90e-28,26;UBERON:0000990,1.90e-28,26;UBERON:0003135,1.71e-27,15;UBERON:0003133,6.16e-27,24;UBERON:0003101,1.20e-25,16;UBERON:0000079,1.20e-25,16;UBERON:0002323,3.74e-14,37;UBERON:0004458,3.74e-14,37;UBERON:0003886,1.03e-13,38;UBERON:0002553,2.69e-13,39|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.287536413054709,1.83843757322004,0,0.127687338085188,1.0752457327937,0,0,0,0,0,0.763991238884051,0.883885756421003,0.142371680799103,0,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.149790639404823,1.83000241127451,1.7591609295801,0.347648640384553,0,0.62336413367868,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.390361328888111,0,0,0,0,0.12811372028485,0,0,0.431135985865684,0.567318240503458,0,0.219195732427575,0,0,0,1.79130840136644,0,0,0,0.621377317606506,1.17263029990548,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,0,0.193952487167626,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.472905432318573,0,0.318909537314974,0.81931657357869,0.172684981865896,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,52.8017116974759,0.712262414669021,0.651547837414304,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.532020700926821,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0,3.73952545986482,2.79902904647316,2.07299960706636,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,1.12738587736838,9.27002585472668,17.8695169693665,20.6118259644691,21.0530512268702,22.9780330667458,6.10257640957921,1.95306577265925,4.08951443260272,1.93267296660805,4.89651010638371,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,1.87682475451182,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.34461281373368,0.952587382566147,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.771626443924566,0.749431733813838,0,0,0,0,0|short_description=p2@Lhcgr}} | ||
|EntrezGene=16867 | |||
|HGNC= | |||
|MCL_coexpression_id=357 | |||
|UniProt=P30730 | |||
|association_with_transcript=-31bp_to_ENSMUST00000024916,NM_013582,uc008dvu.1,uc008dvv.1,uc008dvw.1_5end | |||
|description=CAGE_peak_2_at_Lhcgr_5end | |||
|id=chr17:89191347..89191362,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.11e-13!18;UBERON:0005564!1.11e-13!18;UBERON:0004176!7.11e-13!17;UBERON:0009196!7.11e-13!17;UBERON:0009117!7.11e-13!17;UBERON:0005156!3.89e-12!26;UBERON:0000990!3.89e-12!26;UBERON:0003133!4.47e-11!24;UBERON:0000473!1.29e-10!14;UBERON:0003101!9.28e-10!16;UBERON:0000079!9.28e-10!16;UBERON:0003135!1.52e-09!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.13e-32,18;UBERON:0005564,9.13e-32,18;UBERON:0000473,1.33e-29,14;UBERON:0004176,6.64e-29,17;UBERON:0009196,6.64e-29,17;UBERON:0009117,6.64e-29,17;UBERON:0005156,1.90e-28,26;UBERON:0000990,1.90e-28,26;UBERON:0003135,1.71e-27,15;UBERON:0003133,6.16e-27,24;UBERON:0003101,1.20e-25,16;UBERON:0000079,1.20e-25,16;UBERON:0002323,3.74e-14,37;UBERON:0004458,3.74e-14,37;UBERON:0003886,1.03e-13,38;UBERON:0002553,2.69e-13,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.489963196859816,0.287536413054709,1.83843757322004,0,0.127687338085188,1.0752457327937,0,0,0,0,0,0.763991238884051,0.883885756421003,0.142371680799103,0,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.149790639404823,1.83000241127451,1.7591609295801,0.347648640384553,0,0.62336413367868,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.390361328888111,0,0,0,0,0.12811372028485,0,0,0.431135985865684,0.567318240503458,0,0.219195732427575,0,0,0,1.79130840136644,0,0,0,0.621377317606506,1.17263029990548,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,1.1270773567308,0,0.193952487167626,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.472905432318573,0,0.318909537314974,0.81931657357869,0.172684981865896,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,52.8017116974759,0.712262414669021,0.651547837414304,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.532020700926821,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0,3.73952545986482,2.79902904647316,2.07299960706636,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,1.12738587736838,9.27002585472668,17.8695169693665,20.6118259644691,21.0530512268702,22.9780330667458,6.10257640957921,1.95306577265925,4.08951443260272,1.93267296660805,4.89651010638371,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,1.87682475451182,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.34461281373368,0.952587382566147,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.771626443924566,0.749431733813838,0,0,0,0,0 | |||
|short_description=p2@Lhcgr | |||
}} |
Revision as of 15:37, 13 September 2013
Short description: | p2@Lhcgr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lhcgr_5end |
Coexpression cluster: | MCL_coexpression_mm9:357 |
Association with transcript: | -31bp_to_ENSMUST00000024916, NM_013582, uc008dvu.1, uc008dvv.1, uc008dvw.1_5end |
EntrezGene: | Lhcgr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 9.13e-32 | 18 |
gonad primordium | 9.13e-32 | 18 |
testis | 1.33e-29 | 14 |
external genitalia | 6.64e-29 | 17 |
indifferent external genitalia | 6.64e-29 | 17 |
indifferent gonad | 6.64e-29 | 17 |
reproductive structure | 1.90e-28 | 26 |
reproductive system | 1.90e-28 | 26 |
male reproductive organ | 1.71e-27 | 15 |
reproductive organ | 6.16e-27 | 24 |
male organism | 1.20e-25 | 16 |
male reproductive system | 1.20e-25 | 16 |
body cavity | 3.74e-14 | 37 |
body cavity or lining | 3.74e-14 | 37 |
body cavity precursor | 1.03e-13 | 38 |
anatomical cavity | 2.69e-13 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.