FFCP PHASE1:Mm9::chr18:65183465..65183506,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83814|HGNC=|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0|association_with_transcript=284bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end|description=CAGE_peak_4_at_Nedd4l_5end|id=chr18:65183465..65183506,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!3.19e-12!122;UBERON:0000025!1.92e-10!114;UBERON:0002365!3.91e-10!25;UBERON:0002330!3.91e-10!25;UBERON:0009854!5.51e-10!23;UBERON:0009856!5.51e-10!23;UBERON:0002107!1.42e-09!22;UBERON:0007499!1.42e-09!22;UBERON:0006925!1.42e-09!22;UBERON:0009497!1.42e-09!22;UBERON:0000015!1.42e-09!22;UBERON:0002423!1.42e-09!22;UBERON:0006235!1.42e-09!22;UBERON:0008835!1.42e-09!22;UBERON:0003894!1.42e-09!22;UBERON:0004161!1.42e-09!22;UBERON:0008836!1.42e-09!22;UBERON:0005177!6.85e-09!85;UBERON:0002021!8.55e-08!10;UBERON:0000411!8.55e-08!10;UBERON:0001950!8.55e-08!10;UBERON:0003080!9.23e-08!40;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002780!2.54e-07!39;UBERON:0001890!2.54e-07!39;UBERON:0006240!2.54e-07!39;UBERON:0002616!3.34e-07!49;UBERON:0009569!6.53e-07!66;UBERON:0000468!8.08e-07!333;UBERON:0000475!8.61e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.12e-12,122;UBERON:0000025,3.05e-10,114;UBERON:0009854,8.02e-10,23;UBERON:0009856,8.02e-10,23;UBERON:0002365,1.31e-09,25;UBERON:0002330,1.31e-09,25;UBERON:0002107,2.39e-09,22;UBERON:0007499,2.39e-09,22;UBERON:0006925,2.39e-09,22;UBERON:0009497,2.39e-09,22;UBERON:0000015,2.39e-09,22;UBERON:0002423,2.39e-09,22;UBERON:0006235,2.39e-09,22;UBERON:0008835,2.39e-09,22;UBERON:0003894,2.39e-09,22;UBERON:0004161,2.39e-09,22;UBERON:0008836,2.39e-09,22;UBERON:0002021,6.54e-09,10;UBERON:0000411,6.54e-09,10;UBERON:0001950,6.54e-09,10;UBERON:0005177,7.70e-09,79;UBERON:0003080,3.87e-08,40;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0002616,4.64e-07,46|phase1_expression=2.24208385946712,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,1.5923803897944,0.383381884072945,1.83843757322004,0,9.3211756802187,4.6081959976873,0.263772575460388,0.548925861614458,0.52091337055676,2.51264699101243,6.75315132038016,4.43114918552749,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.0755715601067855,9.27566363845369,7.74381489283248,8.83962733820076,7.55584468292944,13.6453047664011,11.2006721774334,1.82577746171277,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,2.52762222507392,3.9964357901671,0,0,0,0,0,0,0.470354828542819,0,8.89901883843746,0,0,0,0.662524555381181,0.484875253135222,5.59175283654366,0.585561594023094,0.83778682725382,0,0,0,0,9.8861822007183,34.312545211397,8.92145900001337,20.3374454624963,19.6900902144355,9.55825004973976,21.5780879880118,0.81471491080253,1.8661045591514,8.08712826987759,1.68353484709179,0.130120442962704,0,0.360124259610698,1.35634336052144,0.340182495756639,0.384341160854549,0.655912071918102,1.55222022443409,0,0,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0,0,0,0,13.24826675954,0.308713837137853,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,3.02525286935014,1.77902435075896,1.71203063501303,0.474529061544512,1.97638745668813,2.76468729680296,3.18330355265841,3.31438948102504,0.898819408654221,3.45820879799511,0.995706366271836,0.189667900953082,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,1.47285221769669,1.96033265085198,2.95220295959204,1.8839847340965,2.34454611451421,16.3048944897932,0.83422552858047,0.786235980452812,0.674586337154561,1.21716072833102,4.3411888755435,3.31013607315846,10.9324532231308,15.7271169971784,5.21666685057355,30.1913233707445,11.5363693777236,9.98520553966594,16.6702059445094,10.9432422248366,17.3679667690812,5.91210208533135,0,0.814824882210129,3.22515662972857,4.69380496577004,15.2430694272052,14.9967493758189,8.78101415360095,6.30540576424764,3.32197034473162,5.58091690301205,3.4411296090305,5.00786447411097,4.48412081602686,0,0,6.39293554924747,6.34654516500885,3.21101179975584,4.21962071731931,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,6.10510501201433,0.99358059645788,0.178065603667255,0.651547837414304,1.15479086080775,5.30980553359851,2.18502572539483,1.209294227859,2.82907619633847,2.06711325016541,2.76691633149535,2.06742634534577,1.45413491791002,2.49548164869305,2.52829406348653,2.10837217149998,1.03135543248187,39.4909942674394,0.540183282093931,0.646793418913773,1.92903331528433,5.32020700926821,5.70780216326626,5.43011767986999,3.04464949114599,1.64270195644597,4.02480934641258,1.98475558249466,2.80306630000516,2.74489525383039,1.80938774784468,1.90995750405018,2.1338316966858,2.91480836629851,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,5.72802370809068,0.474503990371703,2.84647253977588,2.05210147561422,2.50905955217362,2.18362563746178,2.42755823492677,2.31429676030941,0.523511883968059,5.83267379813068,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0.665957860122194,0,1.00730769818447,11.204996453867,0.375364950902364,0.915758121336325,3.85863082342319,8.02515366456581,12.4245405375755,15.651058041244,17.7597609166213,15.9823459579629,13.7016503954128,10.5755145634558,17.550585006027,22.0657389579868,20.8445508132734,22.2636934053283,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.919217542250071,2.44471400581777,2.26638562962784,2.24643446714271,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.24088033417042,2.69946704091382,1.42888107384922,2.78122382267653,2.50781986602817,1.64834360321323,3.38557516309114,3.08582327146874,3.01708870470874,3.33810665926249,3.34296758254356,2.1645157495526,2.5384382367503,2.0122077016005,1.57841826862706,2.8518863907631,1.68342681497322,2.60997039873183,1.97008964751127,5.32000356120596,2.01417893541756,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,0.956441660344217,0.661774257358546,0.231867835620421|short_description=p4@Nedd4l}} | ||
|EntrezGene=83814 | |||
|HGNC= | |||
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0 | |||
|association_with_transcript=284bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end | |||
|description=CAGE_peak_4_at_Nedd4l_5end | |||
|id=chr18:65183465..65183506,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.19e-12!122;UBERON:0000025!1.92e-10!114;UBERON:0002365!3.91e-10!25;UBERON:0002330!3.91e-10!25;UBERON:0009854!5.51e-10!23;UBERON:0009856!5.51e-10!23;UBERON:0002107!1.42e-09!22;UBERON:0007499!1.42e-09!22;UBERON:0006925!1.42e-09!22;UBERON:0009497!1.42e-09!22;UBERON:0000015!1.42e-09!22;UBERON:0002423!1.42e-09!22;UBERON:0006235!1.42e-09!22;UBERON:0008835!1.42e-09!22;UBERON:0003894!1.42e-09!22;UBERON:0004161!1.42e-09!22;UBERON:0008836!1.42e-09!22;UBERON:0005177!6.85e-09!85;UBERON:0002021!8.55e-08!10;UBERON:0000411!8.55e-08!10;UBERON:0001950!8.55e-08!10;UBERON:0003080!9.23e-08!40;UBERON:0000955!1.46e-07!50;UBERON:0006238!1.46e-07!50;UBERON:0002780!2.54e-07!39;UBERON:0001890!2.54e-07!39;UBERON:0006240!2.54e-07!39;UBERON:0002616!3.34e-07!49;UBERON:0009569!6.53e-07!66;UBERON:0000468!8.08e-07!333;UBERON:0000475!8.61e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.12e-12,122;UBERON:0000025,3.05e-10,114;UBERON:0009854,8.02e-10,23;UBERON:0009856,8.02e-10,23;UBERON:0002365,1.31e-09,25;UBERON:0002330,1.31e-09,25;UBERON:0002107,2.39e-09,22;UBERON:0007499,2.39e-09,22;UBERON:0006925,2.39e-09,22;UBERON:0009497,2.39e-09,22;UBERON:0000015,2.39e-09,22;UBERON:0002423,2.39e-09,22;UBERON:0006235,2.39e-09,22;UBERON:0008835,2.39e-09,22;UBERON:0003894,2.39e-09,22;UBERON:0004161,2.39e-09,22;UBERON:0008836,2.39e-09,22;UBERON:0002021,6.54e-09,10;UBERON:0000411,6.54e-09,10;UBERON:0001950,6.54e-09,10;UBERON:0005177,7.70e-09,79;UBERON:0003080,3.87e-08,40;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0002616,4.64e-07,46 | |||
|phase1_expression=2.24208385946712,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0.159992422793407,0.68822784320151,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,1.5923803897944,0.383381884072945,1.83843757322004,0,9.3211756802187,4.6081959976873,0.263772575460388,0.548925861614458,0.52091337055676,2.51264699101243,6.75315132038016,4.43114918552749,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.0755715601067855,9.27566363845369,7.74381489283248,8.83962733820076,7.55584468292944,13.6453047664011,11.2006721774334,1.82577746171277,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,2.52762222507392,3.9964357901671,0,0,0,0,0,0,0.470354828542819,0,8.89901883843746,0,0,0,0.662524555381181,0.484875253135222,5.59175283654366,0.585561594023094,0.83778682725382,0,0,0,0,9.8861822007183,34.312545211397,8.92145900001337,20.3374454624963,19.6900902144355,9.55825004973976,21.5780879880118,0.81471491080253,1.8661045591514,8.08712826987759,1.68353484709179,0.130120442962704,0,0.360124259610698,1.35634336052144,0.340182495756639,0.384341160854549,0.655912071918102,1.55222022443409,0,0,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0,0.164167464079095,0,0,0,0,13.24826675954,0.308713837137853,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,1.67527699718721,3.02525286935014,1.77902435075896,1.71203063501303,0.474529061544512,1.97638745668813,2.76468729680296,3.18330355265841,3.31438948102504,0.898819408654221,3.45820879799511,0.995706366271836,0.189667900953082,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,1.47285221769669,1.96033265085198,2.95220295959204,1.8839847340965,2.34454611451421,16.3048944897932,0.83422552858047,0.786235980452812,0.674586337154561,1.21716072833102,4.3411888755435,3.31013607315846,10.9324532231308,15.7271169971784,5.21666685057355,30.1913233707445,11.5363693777236,9.98520553966594,16.6702059445094,10.9432422248366,17.3679667690812,5.91210208533135,0,0.814824882210129,3.22515662972857,4.69380496577004,15.2430694272052,14.9967493758189,8.78101415360095,6.30540576424764,3.32197034473162,5.58091690301205,3.4411296090305,5.00786447411097,4.48412081602686,0,0,6.39293554924747,6.34654516500885,3.21101179975584,4.21962071731931,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,6.10510501201433,0.99358059645788,0.178065603667255,0.651547837414304,1.15479086080775,5.30980553359851,2.18502572539483,1.209294227859,2.82907619633847,2.06711325016541,2.76691633149535,2.06742634534577,1.45413491791002,2.49548164869305,2.52829406348653,2.10837217149998,1.03135543248187,39.4909942674394,0.540183282093931,0.646793418913773,1.92903331528433,5.32020700926821,5.70780216326626,5.43011767986999,3.04464949114599,1.64270195644597,4.02480934641258,1.98475558249466,2.80306630000516,2.74489525383039,1.80938774784468,1.90995750405018,2.1338316966858,2.91480836629851,2.59595422814714,0,0.412773735926445,0,0,0,0,0,0,0,5.72802370809068,0.474503990371703,2.84647253977588,2.05210147561422,2.50905955217362,2.18362563746178,2.42755823492677,2.31429676030941,0.523511883968059,5.83267379813068,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,2.0405734525369,0.665957860122194,0,1.00730769818447,11.204996453867,0.375364950902364,0.915758121336325,3.85863082342319,8.02515366456581,12.4245405375755,15.651058041244,17.7597609166213,15.9823459579629,13.7016503954128,10.5755145634558,17.550585006027,22.0657389579868,20.8445508132734,22.2636934053283,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.919217542250071,2.44471400581777,2.26638562962784,2.24643446714271,2.27427490587418,1.77435509923168,2.45214243801899,1.96647165686753,2.24088033417042,2.69946704091382,1.42888107384922,2.78122382267653,2.50781986602817,1.64834360321323,3.38557516309114,3.08582327146874,3.01708870470874,3.33810665926249,3.34296758254356,2.1645157495526,2.5384382367503,2.0122077016005,1.57841826862706,2.8518863907631,1.68342681497322,2.60997039873183,1.97008964751127,5.32000356120596,2.01417893541756,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,0.956441660344217,0.661774257358546,0.231867835620421 | |||
|short_description=p4@Nedd4l | |||
}} |
Revision as of 16:34, 13 September 2013
Short description: | p4@Nedd4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nedd4l_5end |
Coexpression cluster: | NA |
Association with transcript: | 284bp_to_ENSMUST00000080418, ENSMUST00000163809, ENSMUST00000170658, NM_031881, uc008fep.2, uc008feq.2, uc008fer.2_5end |
EntrezGene: | Nedd4l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 6.12e-12 | 122 |
tube | 3.05e-10 | 114 |
digestive tract diverticulum | 8.02e-10 | 23 |
sac | 8.02e-10 | 23 |
exocrine gland | 1.31e-09 | 25 |
exocrine system | 1.31e-09 | 25 |
liver | 2.39e-09 | 22 |
epithelial sac | 2.39e-09 | 22 |
digestive gland | 2.39e-09 | 22 |
epithelium of foregut-midgut junction | 2.39e-09 | 22 |
anatomical boundary | 2.39e-09 | 22 |
hepatobiliary system | 2.39e-09 | 22 |
foregut-midgut junction | 2.39e-09 | 22 |
hepatic diverticulum | 2.39e-09 | 22 |
liver primordium | 2.39e-09 | 22 |
septum transversum | 2.39e-09 | 22 |
liver bud | 2.39e-09 | 22 |
occipital lobe | 6.54e-09 | 10 |
visual cortex | 6.54e-09 | 10 |
neocortex | 6.54e-09 | 10 |
trunk region element | 7.70e-09 | 79 |
anterior neural tube | 3.87e-08 | 40 |
regional part of forebrain | 1.22e-07 | 39 |
forebrain | 1.22e-07 | 39 |
future forebrain | 1.22e-07 | 39 |
brain | 1.84e-07 | 47 |
future brain | 1.84e-07 | 47 |
regional part of brain | 4.64e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.