FFCP PHASE1:Hg19::chr6:10415645..10415675,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7020|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11742|TSSclassifier=S|UniProt=P05549|association_with_transcript=-164bp_to_ENST00000379613_5end|description=CAGE_peak_19_at_TFAP2A_5end|id=chr6:10415645..10415675,-|ontology_enrichment_celltype=CL:0000066!1.22e-29!254;CL:0002077!3.16e-15!33;CL:0000148!1.34e-13!10;CL:0000541!1.34e-13!10;CL:0000710!7.37e-10!20;CL:0002076!3.86e-09!43;CL:0000147!4.90e-09!14;CL:0000075!5.66e-09!27;CL:0000076!1.48e-08!62;CL:0002251!2.79e-07!21;CL:0002159!7.57e-07!13;CL:0000240!7.77e-07!6;CL:0000311!7.77e-07!6;CL:0000079!7.77e-07!6;CL:0000237!7.77e-07!6;CL:0000036!7.77e-07!6;CL:0000357!7.77e-07!6;CL:0000114!7.77e-07!6|ontology_enrichment_celltype_v019=CL:0000148;1.32e-36;10!CL:0000147;6.07e-26;14!CL:0002567;5.76e-24;3!CL:0002077;9.66e-19;34!CL:0000710;6.25e-18;20!CL:0000622;5.21e-14;5!CL:0000150;1.19e-13;9!CL:0000075;4.50e-13;27!CL:0000154;9.15e-12;6!CL:0002623;5.40e-11;3!CL:0002174;1.13e-08;1!CL:0002566;1.13e-08;1!CL:0000501;1.13e-08;1|ontology_enrichment_celltype_v019_2=CL:0000148,4.86e-37,10;CL:0000541,4.86e-37,10;CL:0000147,3.00e-26,14;CL:0002567,5.79e-24,3;CL:0002077,1.31e-20,34;CL:0000710,3.85e-18,20;CL:0000622,8.14e-14,5;CL:0000150,1.65e-13,9;CL:0000075,3.16e-13,27;CL:0000066,8.29e-13,253;CL:0000154,1.32e-11,6;CL:0002623,8.90e-11,3;CL:0002566,5.70e-09,1;CL:0002174,9.74e-09,1;CL:0000501,9.74e-09,1;CL:0000221,1.41e-08,72;CL:0000333,5.44e-08,41|ontology_enrichment_development_v019=UBERON:0000358;4.51e-09;1|ontology_enrichment_disease=DOID:0050687!4.05e-17!143;DOID:305!5.20e-15!106;DOID:1749!4.33e-10!14;DOID:162!8.45e-09!235;DOID:14566!2.61e-08!239|ontology_enrichment_disease_v019=DOID:1749;4.44e-13;14|ontology_enrichment_disease_v019_2=DOID:1749,4.23e-13,14|ontology_enrichment_uberon=UBERON:0001737!5.12e-14!9;UBERON:0001004!2.05e-10!72;UBERON:0004119!3.76e-09!169;UBERON:0000925!3.76e-09!169;UBERON:0006595!3.76e-09!169;UBERON:0000077!7.08e-08!130;UBERON:0001007!1.68e-07!155;UBERON:0001555!1.68e-07!155;UBERON:0007026!1.68e-07!155;UBERON:0001557!6.08e-07!19;UBERON:0008947!8.43e-07!38;UBERON:0003258!8.43e-07!38|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.591534000199219,1.01150814046861,1.44606617930089,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0.201057944823262,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0,1.96843472305724,3.05590740446622,2.34434894420094,3.4214489204541,2.77634230298973,1.8020583470635,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0.131124414959424,0,0.616122696835318,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.61221999997337,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0,0,0,0.179515288819544,0.54323685961004,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.293977192243133,1.13176968554523,0,0,1.06431964417994,1.31560770755134,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0,0.586654148204409,0.400794101257669,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0.713987523454252,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.1049091762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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=S | |||
|UniProt=P05549 | |||
|association_with_transcript=-164bp_to_ENST00000379613_5end | |||
|description=CAGE_peak_19_at_TFAP2A_5end | |||
|id=chr6:10415645..10415675,- | |||
|ontology_enrichment_celltype=CL:0000066!1.22e-29!254;CL:0002077!3.16e-15!33;CL:0000148!1.34e-13!10;CL:0000541!1.34e-13!10;CL:0000710!7.37e-10!20;CL:0002076!3.86e-09!43;CL:0000147!4.90e-09!14;CL:0000075!5.66e-09!27;CL:0000076!1.48e-08!62;CL:0002251!2.79e-07!21;CL:0002159!7.57e-07!13;CL:0000240!7.77e-07!6;CL:0000311!7.77e-07!6;CL:0000079!7.77e-07!6;CL:0000237!7.77e-07!6;CL:0000036!7.77e-07!6;CL:0000357!7.77e-07!6;CL:0000114!7.77e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.32e-36;10!CL:0000147;6.07e-26;14!CL:0002567;5.76e-24;3!CL:0002077;9.66e-19;34!CL:0000710;6.25e-18;20!CL:0000622;5.21e-14;5!CL:0000150;1.19e-13;9!CL:0000075;4.50e-13;27!CL:0000154;9.15e-12;6!CL:0002623;5.40e-11;3!CL:0002174;1.13e-08;1!CL:0002566;1.13e-08;1!CL:0000501;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.86e-37,10;CL:0000541,4.86e-37,10;CL:0000147,3.00e-26,14;CL:0002567,5.79e-24,3;CL:0002077,1.31e-20,34;CL:0000710,3.85e-18,20;CL:0000622,8.14e-14,5;CL:0000150,1.65e-13,9;CL:0000075,3.16e-13,27;CL:0000066,8.29e-13,253;CL:0000154,1.32e-11,6;CL:0002623,8.90e-11,3;CL:0002566,5.70e-09,1;CL:0002174,9.74e-09,1;CL:0000501,9.74e-09,1;CL:0000221,1.41e-08,72;CL:0000333,5.44e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.51e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.05e-17!143;DOID:305!5.20e-15!106;DOID:1749!4.33e-10!14;DOID:162!8.45e-09!235;DOID:14566!2.61e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.44e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.23e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.12e-14!9;UBERON:0001004!2.05e-10!72;UBERON:0004119!3.76e-09!169;UBERON:0000925!3.76e-09!169;UBERON:0006595!3.76e-09!169;UBERON:0000077!7.08e-08!130;UBERON:0001007!1.68e-07!155;UBERON:0001555!1.68e-07!155;UBERON:0007026!1.68e-07!155;UBERON:0001557!6.08e-07!19;UBERON:0008947!8.43e-07!38;UBERON:0003258!8.43e-07!38 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.591534000199219,1.01150814046861,1.44606617930089,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0.201057944823262,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0,1.96843472305724,3.05590740446622,2.34434894420094,3.4214489204541,2.77634230298973,1.8020583470635,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0.131124414959424,0,0.616122696835318,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.61221999997337,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0,0,0,0.179515288819544,0.54323685961004,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.293977192243133,1.13176968554523,0,0,1.06431964417994,1.31560770755134,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0,0.586654148204409,0.400794101257669,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0.713987523454252,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0.694567422971502,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0.607719912354764,0,0.194860308839388,0,0.490696182767533,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,1.48802444071178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,1.10057159113007,0.693153996902029,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,1.07214816264985,0,0.348724276104376,0,0,1.03608082081518,0.3414369541879,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,1.07028081699812,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0.788857810965923,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p19@TFAP2A | |||
}} |
Revision as of 17:08, 13 September 2013
Short description: | p19@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_ENST00000379613_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | P05549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.86e-37 | 10 |
melanoblast | 4.86e-37 | 10 |
pigment cell | 3.00e-26 | 14 |
light melanocyte | 5.79e-24 | 3 |
ecto-epithelial cell | 1.31e-20 | 34 |
neurecto-epithelial cell | 3.85e-18 | 20 |
acinar cell | 8.14e-14 | 5 |
glandular epithelial cell | 1.65e-13 | 9 |
columnar/cuboidal epithelial cell | 3.16e-13 | 27 |
epithelial cell | 8.29e-13 | 253 |
protein secreting cell | 1.32e-11 | 6 |
acinar cell of salivary gland | 8.90e-11 | 3 |
dark melanocyte | 5.70e-09 | 1 |
follicular cell of ovary | 9.74e-09 | 1 |
granulosa cell | 9.74e-09 | 1 |
ectodermal cell | 1.41e-08 | 72 |
migratory neural crest cell | 5.44e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.23e-13 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.