FFCP PHASE1:Mm9::chr19:25102480..25102493,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:25102480..25102493,+|id=chr19:25102480..25102493,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.39e-14!48;UBERON:0000065!1.10e-13!41;UBERON:0001004!3.14e-13!42;UBERON:0002390!5.33e-12!45;UBERON:0003061!5.33e-12!45;UBERON:0002405!6.31e-12!70;UBERON:0004177!2.07e-11!29;UBERON:0000077!8.95e-11!97;UBERON:0001041!9.43e-11!92;UBERON:0005911!7.97e-10!69;UBERON:0001007!2.98e-09!128;UBERON:0001555!2.98e-09!128;UBERON:0007026!2.98e-09!128;UBERON:0004119!5.61e-09!130;UBERON:0000925!5.61e-09!130;UBERON:0006595!5.61e-09!130;UBERON:0002048!6.93e-09!14;UBERON:0000117!6.93e-09!14;UBERON:0000171!6.93e-09!14;UBERON:0000170!6.93e-09!14;UBERON:0005597!6.93e-09!14;UBERON:0000118!6.93e-09!14;UBERON:0005057!8.31e-09!51;UBERON:0004921!1.01e-08!126;UBERON:0004185!1.01e-08!126;UBERON:0005153!1.12e-08!17;UBERON:0002370!3.27e-08!23;UBERON:0000974!3.27e-08!23;UBERON:0004807!3.27e-08!23;UBERON:0005058!3.27e-08!23;UBERON:0003351!3.27e-08!23;UBERON:0009113!3.27e-08!23;UBERON:0003295!3.27e-08!23;UBERON:0009722!3.27e-08!23;UBERON:0005562!3.27e-08!23;UBERON:0007690!3.27e-08!23;UBERON:0006562!9.23e-08!24;UBERON:0003408!9.23e-08!24;UBERON:0001557!9.23e-08!24;UBERON:0001042!9.23e-08!24;UBERON:0008814!9.23e-08!24;UBERON:0009145!9.23e-08!24;UBERON:0005178!5.30e-07!17;UBERON:0005181!5.30e-07!17;UBERON:0002224!5.30e-07!17;UBERON:0000915!5.30e-07!17;UBERON:0008947!5.30e-07!17;UBERON:0003258!5.30e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48;UBERON:0002370,4.48e-08,23;UBERON:0000974,4.48e-08,23;UBERON:0004807,4.48e-08,23;UBERON:0005058,4.48e-08,23;UBERON:0003351,4.48e-08,23;UBERON:0009113,4.48e-08,23;UBERON:0003295,4.48e-08,23;UBERON:0009722,4.48e-08,23;UBERON:0005562,4.48e-08,23;UBERON:0007690,4.48e-08,23;UBERON:0006562,9.41e-08,24;UBERON:0003408,9.41e-08,24;UBERON:0001557,9.41e-08,24;UBERON:0001042,9.41e-08,24;UBERON:0008814,9.41e-08,24;UBERON:0009145,9.41e-08,24;UBERON:0000072,6.29e-07,27;UBERON:0000065,7.05e-07,41|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0.84877930359606,0.17008658030214,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,16.3130866697718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0.476087281772027,0,0.157635144106191,1.10732344824387,0.318909537314974,0.163863314715738,0.690739927463582,0.578596234326046,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.202725215290164,0,0,0.179026695667481,0,0.841368146639782,0.738447635872886,0.605798699688886,0.914481679859998,1.10908803650525,1.26695244961678,1.44317762460494,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr19:25102480..25102493,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:25102480..25102493,+ | |||
|id=chr19:25102480..25102493,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.39e-14!48;UBERON:0000065!1.10e-13!41;UBERON:0001004!3.14e-13!42;UBERON:0002390!5.33e-12!45;UBERON:0003061!5.33e-12!45;UBERON:0002405!6.31e-12!70;UBERON:0004177!2.07e-11!29;UBERON:0000077!8.95e-11!97;UBERON:0001041!9.43e-11!92;UBERON:0005911!7.97e-10!69;UBERON:0001007!2.98e-09!128;UBERON:0001555!2.98e-09!128;UBERON:0007026!2.98e-09!128;UBERON:0004119!5.61e-09!130;UBERON:0000925!5.61e-09!130;UBERON:0006595!5.61e-09!130;UBERON:0002048!6.93e-09!14;UBERON:0000117!6.93e-09!14;UBERON:0000171!6.93e-09!14;UBERON:0000170!6.93e-09!14;UBERON:0005597!6.93e-09!14;UBERON:0000118!6.93e-09!14;UBERON:0005057!8.31e-09!51;UBERON:0004921!1.01e-08!126;UBERON:0004185!1.01e-08!126;UBERON:0005153!1.12e-08!17;UBERON:0002370!3.27e-08!23;UBERON:0000974!3.27e-08!23;UBERON:0004807!3.27e-08!23;UBERON:0005058!3.27e-08!23;UBERON:0003351!3.27e-08!23;UBERON:0009113!3.27e-08!23;UBERON:0003295!3.27e-08!23;UBERON:0009722!3.27e-08!23;UBERON:0005562!3.27e-08!23;UBERON:0007690!3.27e-08!23;UBERON:0006562!9.23e-08!24;UBERON:0003408!9.23e-08!24;UBERON:0001557!9.23e-08!24;UBERON:0001042!9.23e-08!24;UBERON:0008814!9.23e-08!24;UBERON:0009145!9.23e-08!24;UBERON:0005178!5.30e-07!17;UBERON:0005181!5.30e-07!17;UBERON:0002224!5.30e-07!17;UBERON:0000915!5.30e-07!17;UBERON:0008947!5.30e-07!17;UBERON:0003258!5.30e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48;UBERON:0002370,4.48e-08,23;UBERON:0000974,4.48e-08,23;UBERON:0004807,4.48e-08,23;UBERON:0005058,4.48e-08,23;UBERON:0003351,4.48e-08,23;UBERON:0009113,4.48e-08,23;UBERON:0003295,4.48e-08,23;UBERON:0009722,4.48e-08,23;UBERON:0005562,4.48e-08,23;UBERON:0007690,4.48e-08,23;UBERON:0006562,9.41e-08,24;UBERON:0003408,9.41e-08,24;UBERON:0001557,9.41e-08,24;UBERON:0001042,9.41e-08,24;UBERON:0008814,9.41e-08,24;UBERON:0009145,9.41e-08,24;UBERON:0000072,6.29e-07,27;UBERON:0000065,7.05e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0.84877930359606,0.17008658030214,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,16.3130866697718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0.476087281772027,0,0.157635144106191,1.10732344824387,0.318909537314974,0.163863314715738,0.690739927463582,0.578596234326046,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0.202725215290164,0,0,0.179026695667481,0,0.841368146639782,0.738447635872886,0.605798699688886,0.914481679859998,1.10908803650525,1.26695244961678,1.44317762460494,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr19:25102480..25102493,+ | |||
}} |
Revision as of 17:15, 13 September 2013
Short description: | p@chr19:25102480..25102493, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:25102480..25102493, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.20e-12 | 1 |
axillary lymph node | 1.20e-12 | 1 |
peripheral lymph node | 1.20e-12 | 1 |
shoulder | 1.20e-12 | 1 |
hemolymphoid system | 2.57e-08 | 48 |
immune system | 2.57e-08 | 48 |
thymus | 4.48e-08 | 23 |
neck | 4.48e-08 | 23 |
respiratory system epithelium | 4.48e-08 | 23 |
hemolymphoid system gland | 4.48e-08 | 23 |
pharyngeal epithelium | 4.48e-08 | 23 |
thymic region | 4.48e-08 | 23 |
pharyngeal gland | 4.48e-08 | 23 |
entire pharyngeal arch endoderm | 4.48e-08 | 23 |
thymus primordium | 4.48e-08 | 23 |
early pharyngeal endoderm | 4.48e-08 | 23 |
pharynx | 9.41e-08 | 24 |
gland of gut | 9.41e-08 | 24 |
upper respiratory tract | 9.41e-08 | 24 |
chordate pharynx | 9.41e-08 | 24 |
pharyngeal arch system | 9.41e-08 | 24 |
pharyngeal region of foregut | 9.41e-08 | 24 |
segment of respiratory tract | 6.29e-07 | 27 |
respiratory tract | 7.05e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.