FFCP PHASE1:Mm9::chr19:3907087..3907117,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27060|HGNC=|MCL_coexpression_id=316|UniProt=D6RFN1|association_with_transcript=0bp_to_ENSMUST00000135070_5end|description=CAGE_peak_2_at_Tcirg1_5end|id=chr19:3907087..3907117,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.24e-12!48;UBERON:0002390!4.24e-11!45;UBERON:0003061!4.24e-11!45;UBERON:0002204!2.10e-08!32;UBERON:0003081!8.98e-08!88;UBERON:0001474!5.27e-07!22;UBERON:0004765!5.27e-07!22;UBERON:0001434!5.27e-07!22;UBERON:0002405!9.27e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.22e-12,48;UBERON:0002405,9.22e-12,48;UBERON:0002390,4.24e-11,45;UBERON:0003061,4.24e-11,45;UBERON:0002204,2.10e-08,32;UBERON:0003081,1.74e-07,87;UBERON:0001474,5.26e-07,22;UBERON:0004765,5.26e-07,22;UBERON:0001434,5.26e-07,22|phase1_expression=6.24580503708696,3.14077866875425,1.81999695755814,2.41971369045464,7.51343594919521,6.71517087647559,4.20502753071946,16.9151553708465,3.37892933164,2.80877431586392,4.62288514208863,6.1424562426409,12.1552518251156,13.4627419725256,3.33109761815663,4.04950534779652,2.09868563438444,11.5143690355757,12.066070157305,10.6097412949508,3.82694805679814,4.96454756004426,3.91799683708403,6.55968933452967,5.96464130774642,4.59385571292016,4.30761996159075,4.95583835177545,2.28028103347649,4.53654233567875,4.8780712344167,1.90509202037889,4.30545351309199,0,5.77703239502549,4.65457007003779,6.12508068787107,11.3003540298965,6.2506827561904,8.89990364755457,12.9410927366823,9.56263678941824,11.1667381197165,6.04304726282771,6.18399280439039,5.32285581268876,10.9534788208725,5.23260375313072,5.27246838562732,5.63846707315422,4.75953833526233,2.87505128729943,14.5970867270231,16.6833292662609,19.4934403502629,6.17422646486273,7.73640287834643,5.67239301505187,0.606949382578793,1.5869729378161,0,9.4876468979357,5.33576877666684,33.2962895394118,39.554654502679,44.7602472416043,10.4860038681442,14.9845139075406,1.65903379693564,1.21505344498522,1.47227472945967,3.42781181284564,3.09215957332259,1.71487118900936,1.82106394934649,0,5.50579404996943,3.83062014255563,5.83704826373725,0.923204014111357,0.548925861614458,2.08365348222704,6.14202597803038,5.06486349028512,6.87592114995646,2.35702868378934,4.6982654663704,1.4911955666024,5.98236927332154,9.14415877292105,14.2033599463822,2.58127163094416,2.03991400112325,4.85732872474035,3.89865850468601,2.24013443548668,3.5111105032938,6.81721290312231,5.45550609666024,4.24007489412408,4.78867627240714,1.28326477414318,2.54805239706646,7.11066703153331,3.24736561516821,2.28023878927589,2.52762222507392,3.88225191044804,7.76813650941515,7.27366481417641,3.29622120855658,3.04465478312141,4.15107895060905,4.82312449768392,5.29149182110672,5.90632979249475,3.46072954828123,5.20557684911682,10.6153266233985,5.3383060482645,9.49618529379692,9.69750506270444,7.45567044872489,0.292780797011547,0.83778682725382,7.91916871146633,8.02761334189666,4.79922184794726,8.25956475974921,6.44099749440738,5.49000723382352,1.7591609295801,1.39059456153821,3.06858548796397,4.77912502486988,3.40706652442291,3.66621709861139,9.33052279575698,3.28539585963777,1.26265113531884,2.47228841629137,2.75882525320168,1.98068342785884,2.71268672104287,3.06164246180975,2.43416068541215,1.78033276663485,4.13925393182425,1.72454394346274,5.48407632486676,5.63043597324636,7.01426343768239,6.11703948296315,5.2237824978325,4.52720700097476,4.97585667046233,6.31991868581911,10.0365683774739,7.95657798307659,3.52113813310353,3.98694301967864,2.16074473753218,4.49814997611899,2.55793501271625,4.78228049950873,0.930135779001631,2.95100741539581,2.80236821681207,2.30383789878873,2.13417703302824,2.83740833410495,4.38599962275997,3.51280184465681,3.75777972529041,3.36463917702604,1.74937841044784,7.59963200862735,4.23120906661671,2.77274725695804,4.18026009348789,3.8660238396628,6.45387278794696,7.11609740303585,11.6037631928661,5.21981967698963,8.07024878147653,9.0480675168097,14.3248659869629,7.99352757188393,6.29173586057955,5.61958929674205,3.98282546508734,2.27601481143698,3.19895835307241,5.63538678365402,2.8511185898344,2.90928730751439,3.64706263429657,3.28829993046138,3.39503340353085,3.767969468193,3.94870924549762,3.55743152504579,2.66952169145751,2.75182593158484,2.9232074610031,2.84004169943904,4.82354319504834,2.80088436959562,2.5892652370573,6.64754429777645,3.29473695825698,7.18841032636773,7.81495990103857,4.05648975048929,3.28352541331245,5.20252499213545,5.30687873499704,9.05290631816363,3.03186258832776,4.72598431681875,4.58311731593008,3.98973422090454,5.69521275302174,6.66522194480839,4.09780660501378,6.14777062014145,6.42247599981447,6.69710028361446,8.35702905050264,11.2245238212832,7.5217510462386,22.6186925908908,24.4757557718419,12.7858710984949,6.89841865761831,4.49541651965817,3.98519734413491,0.983609672260053,4.29200576247434,11.042787679569,6.24701990874622,6.03185513651837,6.21318874676635,11.1399337041197,6.79383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| ||
|EntrezGene=27060 | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|UniProt=D6RFN1 | |||
|association_with_transcript=0bp_to_ENSMUST00000135070_5end | |||
|description=CAGE_peak_2_at_Tcirg1_5end | |||
|id=chr19:3907087..3907117,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.24e-12!48;UBERON:0002390!4.24e-11!45;UBERON:0003061!4.24e-11!45;UBERON:0002204!2.10e-08!32;UBERON:0003081!8.98e-08!88;UBERON:0001474!5.27e-07!22;UBERON:0004765!5.27e-07!22;UBERON:0001434!5.27e-07!22;UBERON:0002405!9.27e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.22e-12,48;UBERON:0002405,9.22e-12,48;UBERON:0002390,4.24e-11,45;UBERON:0003061,4.24e-11,45;UBERON:0002204,2.10e-08,32;UBERON:0003081,1.74e-07,87;UBERON:0001474,5.26e-07,22;UBERON:0004765,5.26e-07,22;UBERON:0001434,5.26e-07,22 | |||
|phase1_expression=6.24580503708696,3.14077866875425,1.81999695755814,2.41971369045464,7.51343594919521,6.71517087647559,4.20502753071946,16.9151553708465,3.37892933164,2.80877431586392,4.62288514208863,6.1424562426409,12.1552518251156,13.4627419725256,3.33109761815663,4.04950534779652,2.09868563438444,11.5143690355757,12.066070157305,10.6097412949508,3.82694805679814,4.96454756004426,3.91799683708403,6.55968933452967,5.96464130774642,4.59385571292016,4.30761996159075,4.95583835177545,2.28028103347649,4.53654233567875,4.8780712344167,1.90509202037889,4.30545351309199,0,5.77703239502549,4.65457007003779,6.12508068787107,11.3003540298965,6.2506827561904,8.89990364755457,12.9410927366823,9.56263678941824,11.1667381197165,6.04304726282771,6.18399280439039,5.32285581268876,10.9534788208725,5.23260375313072,5.27246838562732,5.63846707315422,4.75953833526233,2.87505128729943,14.5970867270231,16.6833292662609,19.4934403502629,6.17422646486273,7.73640287834643,5.67239301505187,0.606949382578793,1.5869729378161,0,9.4876468979357,5.33576877666684,33.2962895394118,39.554654502679,44.7602472416043,10.4860038681442,14.9845139075406,1.65903379693564,1.21505344498522,1.47227472945967,3.42781181284564,3.09215957332259,1.71487118900936,1.82106394934649,0,5.50579404996943,3.83062014255563,5.83704826373725,0.923204014111357,0.548925861614458,2.08365348222704,6.14202597803038,5.06486349028512,6.87592114995646,2.35702868378934,4.6982654663704,1.4911955666024,5.98236927332154,9.14415877292105,14.2033599463822,2.58127163094416,2.03991400112325,4.85732872474035,3.89865850468601,2.24013443548668,3.5111105032938,6.81721290312231,5.45550609666024,4.24007489412408,4.78867627240714,1.28326477414318,2.54805239706646,7.11066703153331,3.24736561516821,2.28023878927589,2.52762222507392,3.88225191044804,7.76813650941515,7.27366481417641,3.29622120855658,3.04465478312141,4.15107895060905,4.82312449768392,5.29149182110672,5.90632979249475,3.46072954828123,5.20557684911682,10.6153266233985,5.3383060482645,9.49618529379692,9.69750506270444,7.45567044872489,0.292780797011547,0.83778682725382,7.91916871146633,8.02761334189666,4.79922184794726,8.25956475974921,6.44099749440738,5.49000723382352,1.7591609295801,1.39059456153821,3.06858548796397,4.77912502486988,3.40706652442291,3.66621709861139,9.33052279575698,3.28539585963777,1.26265113531884,2.47228841629137,2.75882525320168,1.98068342785884,2.71268672104287,3.06164246180975,2.43416068541215,1.78033276663485,4.13925393182425,1.72454394346274,5.48407632486676,5.63043597324636,7.01426343768239,6.11703948296315,5.2237824978325,4.52720700097476,4.97585667046233,6.31991868581911,10.0365683774739,7.95657798307659,3.52113813310353,3.98694301967864,2.16074473753218,4.49814997611899,2.55793501271625,4.78228049950873,0.930135779001631,2.95100741539581,2.80236821681207,2.30383789878873,2.13417703302824,2.83740833410495,4.38599962275997,3.51280184465681,3.75777972529041,3.36463917702604,1.74937841044784,7.59963200862735,4.23120906661671,2.77274725695804,4.18026009348789,3.8660238396628,6.45387278794696,7.11609740303585,11.6037631928661,5.21981967698963,8.07024878147653,9.0480675168097,14.3248659869629,7.99352757188393,6.29173586057955,5.61958929674205,3.98282546508734,2.27601481143698,3.19895835307241,5.63538678365402,2.8511185898344,2.90928730751439,3.64706263429657,3.28829993046138,3.39503340353085,3.767969468193,3.94870924549762,3.55743152504579,2.66952169145751,2.75182593158484,2.9232074610031,2.84004169943904,4.82354319504834,2.80088436959562,2.5892652370573,6.64754429777645,3.29473695825698,7.18841032636773,7.81495990103857,4.05648975048929,3.28352541331245,5.20252499213545,5.30687873499704,9.05290631816363,3.03186258832776,4.72598431681875,4.58311731593008,3.98973422090454,5.69521275302174,6.66522194480839,4.09780660501378,6.14777062014145,6.42247599981447,6.69710028361446,8.35702905050264,11.2245238212832,7.5217510462386,22.6186925908908,24.4757557718419,12.7858710984949,6.89841865761831,4.49541651965817,3.98519734413491,0.983609672260053,4.29200576247434,11.042787679569,6.24701990874622,6.03185513651837,6.21318874676635,11.1399337041197,6.79383673893198,6.07216052512342,8.47541987942804,7.11518000303742,0.642642632843614,4.68402281187286,3.20518086601059,3.4206261464251,6.59880491890142,11.9470624505967,3.15614827001476,2.72091201268276,3.39489143560617,4.72483028609236,6.14870295887855,5.68542244970086,6.18007340111759,3.92147116223193,5.68866164284469,9.48767477174989,5.15677716240934,6.46835250932197,2.52085531643834,4.52755393239641,4.92975180572662,4.07882537377229,3.38900753443934,4.27827453565514,1.8267896946876,7.50949465803873,4.66030555900404,2.20528398054962,5.11147384118588,7.42736362801165,4.46315644468353,4.65552141612232,3.61109979439135,4.66369338607761,5.7481843623258,8.20180227829693,5.57244543500701,5.00025223898222,5.08594833912666,6.01454601972511,7.0921233694022,7.64902934972349,6.85762116385924,11.0559979043539,10.5013767981662,3.63786392618306,3.25311147402958,4.64422965533745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| |||
|short_description=p2@Tcirg1 | |||
}} |
Revision as of 17:31, 13 September 2013
Short description: | p2@Tcirg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tcirg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_ENSMUST00000135070_5end |
EntrezGene: | Tcirg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.22e-12 | 48 |
immune system | 9.22e-12 | 48 |
hematopoietic system | 4.24e-11 | 45 |
blood island | 4.24e-11 | 45 |
musculoskeletal system | 2.10e-08 | 32 |
lateral plate mesoderm | 1.74e-07 | 87 |
bone element | 5.26e-07 | 22 |
skeletal element | 5.26e-07 | 22 |
skeletal system | 5.26e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.