FFCP PHASE1:Mm9::chr19:43954262..43954292,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71972|HGNC=|MCL_coexpression_id=2261|UniProt=Q6TXD4|association_with_transcript=-4bp_to_uc008hox.1_5end|description=CAGE_peak_1_at_Dnmbp_5end|id=chr19:43954262..43954292,-|ontology_enrichment_celltype=CL:0000055!1.56e-10!50;CL:0000221!5.05e-10!44;CL:0000133!5.05e-10!44;CL:0002319!1.01e-09!43;CL:0000393!5.61e-07!39;CL:0000211!5.61e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,6.08e-10,44;CL:0000133,6.08e-10,44;CL:0002319,1.56e-09,43;CL:0002321,5.72e-08,70;CL:0000333,1.19e-07,10;CL:0000095,1.19e-07,10;CL:0000243,1.19e-07,10;CL:0000123,1.19e-07,10;CL:0000125,1.19e-07,10;CL:0000030,1.19e-07,10;CL:0000339,1.19e-07,10;CL:0000107,1.84e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!5.39e-07!11;UBERON:0000073!9.54e-07!75;UBERON:0001016!9.54e-07!75;UBERON:0000922!9.62e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.99e-09,11;UBERON:0002410,1.84e-07,9|phase1_expression=1.12104192973356,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.93993100536592,3.12029478674859,0.782391344348039,3.2703773457067,5.93152693383074,4.86074747685709,3.91961980551015,1.43752564364972,0,0,0,0.257259436035947,1.71920063963254,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,2.68952813725088,1.03689612308478,0.810035629990144,0.841299845405528,0.571301968807607,0.662605622854841,1.10241719293459,1.82106394934649,0.919218786610021,0,0.510749352340751,0.614426133024974,1.05509030184155,1.18933936683133,1.04182674111352,0,0,0.30559649555362,1.17851434189467,0.711858403995515,0.745597783301202,1.96888102666279,2.04043212288321,0.289864488701678,0,0,0,0,0,0.140444420131752,3.2381761289831,1.81850203222008,1.06001872353102,1.26759077799012,3.84979432242953,5.09610479413291,7.11066703153331,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0.148442139064825,1.38788261412909,0.913396434936424,0.230615497256059,0.452167921657868,0.352766121407114,0.753999547978053,0.741584903203122,0.433798070759735,0,0.808834249737046,0.441683036920787,0,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,2.13862664085664,0.248813941220186,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.62055916824814,0.60281927134286,1.08858398642125,1.15302348256365,1.59292931751539,0.517406741478031,1.72454394346274,2.08016688184601,1.93546236580344,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0,0.210289948564127,0.617427674275707,0,0,2.13288250535234,3.25131340604614,2.19074684247559,1.21010114774006,1.11189021922435,1.52180500890047,0.949058123089023,0.164698954724011,1.00534083520108,0.397912944082302,0.974820435595601,0,0.216138049874694,0.199141273254367,2.65535061334314,1.37098215131675,0,1.4255592949172,2.32742984601151,0.911765658574141,0.569128834118316,0,0.156998727841375,0.123397163921801,0,0.667380422864376,0.786235980452812,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,1.70542270593436,2.93336957595647,2.37643120085263,2.11221223459652,2.51259386162724,0.238043640886014,0.780534591431195,0.788175720530955,0.44292937929755,1.2756381492599,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,3.27869890753351,0.252470927204373,2.52406575533005,3.51394869866975,2.15423397732799,3.82350076724083,1.78238939265915,3.39691836946599,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0.99358059645788,1.78065603667255,2.11753047159649,2.8044920905331,0,1.21390318077491,1.51161778482376,0.188605079755898,0.590603785761546,1.53717573971964,0.775284879504663,1.45413491791002,0.712994756769443,0.948110273807448,0,1.03135543248187,0.340439605753788,1.44048875225048,1.03486947026204,0.857348140126369,1.24138163549592,1.60531935841864,0.987294123612726,1.522324745573,0.469343416127421,0.63549621259146,0.220528398054962,0,0.645857706783622,0.784068024066026,0.238744688006273,0,0.582961673259701,0,0.170870880797853,1.65109494370578,0.185194527369712,0,0,0,0,0,0,0,2.37251995185852,1.62655573701479,1.40406943068342,0.627264888043406,1.31017538247707,1.07891477107857,0.661227645802687,0.523511883968059,0.388844919875379,0,0,1.79419855252775,0.992750942742586,2.52786544847262,2.19571699912143,1.351649003926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| ||
|EntrezGene=71972 | |||
|HGNC= | |||
|MCL_coexpression_id=2261 | |||
|UniProt=Q6TXD4 | |||
|association_with_transcript=-4bp_to_uc008hox.1_5end | |||
|description=CAGE_peak_1_at_Dnmbp_5end | |||
|id=chr19:43954262..43954292,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-10!50;CL:0000221!5.05e-10!44;CL:0000133!5.05e-10!44;CL:0002319!1.01e-09!43;CL:0000393!5.61e-07!39;CL:0000211!5.61e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.08e-10,44;CL:0000133,6.08e-10,44;CL:0002319,1.56e-09,43;CL:0002321,5.72e-08,70;CL:0000333,1.19e-07,10;CL:0000095,1.19e-07,10;CL:0000243,1.19e-07,10;CL:0000123,1.19e-07,10;CL:0000125,1.19e-07,10;CL:0000030,1.19e-07,10;CL:0000339,1.19e-07,10;CL:0000107,1.84e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!5.39e-07!11;UBERON:0000073!9.54e-07!75;UBERON:0001016!9.54e-07!75;UBERON:0000922!9.62e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.99e-09,11;UBERON:0002410,1.84e-07,9 | |||
|phase1_expression=1.12104192973356,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.93993100536592,3.12029478674859,0.782391344348039,3.2703773457067,5.93152693383074,4.86074747685709,3.91961980551015,1.43752564364972,0,0,0,0.257259436035947,1.71920063963254,0.515672092277442,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,2.68952813725088,1.03689612308478,0.810035629990144,0.841299845405528,0.571301968807607,0.662605622854841,1.10241719293459,1.82106394934649,0.919218786610021,0,0.510749352340751,0.614426133024974,1.05509030184155,1.18933936683133,1.04182674111352,0,0,0.30559649555362,1.17851434189467,0.711858403995515,0.745597783301202,1.96888102666279,2.04043212288321,0.289864488701678,0,0,0,0,0,0.140444420131752,3.2381761289831,1.81850203222008,1.06001872353102,1.26759077799012,3.84979432242953,5.09610479413291,7.11066703153331,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0.148442139064825,1.38788261412909,0.913396434936424,0.230615497256059,0.452167921657868,0.352766121407114,0.753999547978053,0.741584903203122,0.433798070759735,0,0.808834249737046,0.441683036920787,0,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,2.13862664085664,0.248813941220186,0.252722758433675,0.420883711772948,1.04096354370163,1.37941262660084,1.62055916824814,0.60281927134286,1.08858398642125,1.15302348256365,1.59292931751539,0.517406741478031,1.72454394346274,2.08016688184601,1.93546236580344,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0,0.210289948564127,0.617427674275707,0,0,2.13288250535234,3.25131340604614,2.19074684247559,1.21010114774006,1.11189021922435,1.52180500890047,0.949058123089023,0.164698954724011,1.00534083520108,0.397912944082302,0.974820435595601,0,0.216138049874694,0.199141273254367,2.65535061334314,1.37098215131675,0,1.4255592949172,2.32742984601151,0.911765658574141,0.569128834118316,0,0.156998727841375,0.123397163921801,0,0.667380422864376,0.786235980452812,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,1.70542270593436,2.93336957595647,2.37643120085263,2.11221223459652,2.51259386162724,0.238043640886014,0.780534591431195,0.788175720530955,0.44292937929755,1.2756381492599,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0,0.481651769963376,0.468846746368813,3.27869890753351,0.252470927204373,2.52406575533005,3.51394869866975,2.15423397732799,3.82350076724083,1.78238939265915,3.39691836946599,4.04810701674894,2.92255857911312,0.790575555893047,0.642642632843614,0.99358059645788,1.78065603667255,2.11753047159649,2.8044920905331,0,1.21390318077491,1.51161778482376,0.188605079755898,0.590603785761546,1.53717573971964,0.775284879504663,1.45413491791002,0.712994756769443,0.948110273807448,0,1.03135543248187,0.340439605753788,1.44048875225048,1.03486947026204,0.857348140126369,1.24138163549592,1.60531935841864,0.987294123612726,1.522324745573,0.469343416127421,0.63549621259146,0.220528398054962,0,0.645857706783622,0.784068024066026,0.238744688006273,0,0.582961673259701,0,0.170870880797853,1.65109494370578,0.185194527369712,0,0,0,0,0,0,0,2.37251995185852,1.62655573701479,1.40406943068342,0.627264888043406,1.31017538247707,1.07891477107857,0.661227645802687,0.523511883968059,0.388844919875379,0,0,1.79419855252775,0.992750942742586,2.52786544847262,2.19571699912143,1.35164900392623,1.5256441023948,1.0416350787516,0.419437377702843,0.241584120826006,0.288030006257865,0,1.01362607645082,0.308132871494482,0.389762468933385,0.537080087002444,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0,0,0,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,0.36630324853453,0.428736758158132,1.00314420807073,0.564751842617067,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0,0,1.24544817101012,2.39414924040619,0.853668028770671,0.486213434136588,1.25767897576789,0.919217542250071,0.666740183404846,1.23621034343337,0.320919209591815,1.01078884705519,2.28131369901216,0.377252682772152,0.936415074698824,0.640251524048693,0.516919220600519,0.952587382566147,0.811190281613988,0.964546102318525,1.64834360321323,0.735994600671987,0,1.59728225543404,0.476872379894642,0.436039249896986,0.846984423737976,0.592302255241736,0.73171189149109,0,1.08643291076689,0.561142271657738,0.949080144993393,1.0835493061312,0.409231043169689,1.23949472948773,0.385813221962283,1.49886346762768,0.467863216890817,0,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Dnmbp | |||
}} |
Revision as of 17:42, 13 September 2013
Short description: | p1@Dnmbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnmbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2261 |
Association with transcript: | -4bp_to_uc008hox.1_5end |
EntrezGene: | Dnmbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.08e-10 | 44 |
neurectodermal cell | 6.08e-10 | 44 |
neural cell | 1.56e-09 | 43 |
embryonic cell | 5.72e-08 | 70 |
migratory neural crest cell | 1.19e-07 | 10 |
neuron associated cell | 1.19e-07 | 10 |
glial cell (sensu Vertebrata) | 1.19e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.19e-07 | 10 |
glial cell | 1.19e-07 | 10 |
glioblast | 1.19e-07 | 10 |
glioblast (sensu Vertebrata) | 1.19e-07 | 10 |
autonomic neuron | 1.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.99e-09 | 11 |
autonomic nervous system | 1.84e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.