FFCP PHASE1:Mm9::chr19:54120078..54120093,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11551|HGNC=|MCL_coexpression_id=3205|UniProt=Q1HL33|association_with_transcript=328bp_to_uc008hxi.1_5end|description=CAGE_peak_6_at_Adra2a_5end|id=chr19:54120078..54120093,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000708,1.35e-25,2;CL:0000151,1.93e-17,3;CL:0000499,1.93e-17,3;CL:0000327,1.93e-17,3;CL:0002250,2.82e-17,3;CL:0002603,9.82e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.37e-08!52;UBERON:0005068!4.37e-08!52;UBERON:0006241!4.37e-08!52;UBERON:0007135!4.37e-08!52;UBERON:0002020!1.52e-07!34;UBERON:0001017!2.63e-07!73;UBERON:0005743!2.63e-07!73;UBERON:0000073!6.49e-07!75;UBERON:0001016!6.49e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.35e-25,2;UBERON:0001153,4.85e-14,1;UBERON:0001045,4.85e-14,1;UBERON:0001155,1.14e-07,2;UBERON:0000059,1.14e-07,2|phase1_expression=0,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,9.38869613217647,0,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,0,0,0,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,5.59175283654366,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,5.05498395837992,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p6@Adra2a}} | ||
|EntrezGene=11551 | |||
|HGNC= | |||
|MCL_coexpression_id=3205 | |||
|UniProt=Q1HL33 | |||
|association_with_transcript=328bp_to_uc008hxi.1_5end | |||
|description=CAGE_peak_6_at_Adra2a_5end | |||
|id=chr19:54120078..54120093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.35e-25,2;CL:0000151,1.93e-17,3;CL:0000499,1.93e-17,3;CL:0000327,1.93e-17,3;CL:0002250,2.82e-17,3;CL:0002603,9.82e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.37e-08!52;UBERON:0005068!4.37e-08!52;UBERON:0006241!4.37e-08!52;UBERON:0007135!4.37e-08!52;UBERON:0002020!1.52e-07!34;UBERON:0001017!2.63e-07!73;UBERON:0005743!2.63e-07!73;UBERON:0000073!6.49e-07!75;UBERON:0001016!6.49e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.35e-25,2;UBERON:0001153,4.85e-14,1;UBERON:0001045,4.85e-14,1;UBERON:0001155,1.14e-07,2;UBERON:0000059,1.14e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,9.38869613217647,0,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,0,0,0,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,5.59175283654366,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,5.05498395837992,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Adra2a | |||
}} |
Revision as of 18:04, 13 September 2013
Short description: | p6@Adra2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Adra2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3205 |
Association with transcript: | 328bp_to_uc008hxi.1_5end |
EntrezGene: | Adra2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.35e-25 | 2 |
secretory cell | 1.93e-17 | 3 |
stromal cell | 1.93e-17 | 3 |
extracellular matrix secreting cell | 1.93e-17 | 3 |
intestinal crypt stem cell | 2.82e-17 | 3 |
astrocyte of the cerebellum | 9.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.35e-25 | 2 |
caecum | 4.85e-14 | 1 |
midgut | 4.85e-14 | 1 |
colon | 1.14e-07 | 2 |
large intestine | 1.14e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.