FFCP PHASE1:Mm9::chr19:8788690..8788697,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17254|HGNC=|MCL_coexpression_id=310|UniProt=P10852|association_with_transcript=-303bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end|description=CAGE_peak_17_at_Slc3a2_5end|id=chr19:8788690..8788697,-|ontology_enrichment_celltype=CL:0002453!1.10e-13!8;CL:0000333!1.13e-10!10;CL:0000095!1.13e-10!10;CL:0000243!1.13e-10!10;CL:0000123!1.13e-10!10;CL:0000125!1.13e-10!10;CL:0000030!1.13e-10!10;CL:0000339!1.13e-10!10;CL:0000128!7.52e-10!6;CL:0000126!7.52e-10!6;CL:0000127!7.52e-10!6;CL:0000219!1.67e-07!54|ontology_enrichment_celltype_v019_2=CL:0002453,2.62e-49,8;CL:0000128,4.13e-46,6;CL:0000126,4.13e-46,6;CL:0000127,4.13e-46,6;CL:0000333,1.59e-39,10;CL:0000095,1.59e-39,10;CL:0000243,1.59e-39,10;CL:0000123,1.59e-39,10;CL:0000125,1.59e-39,10;CL:0000030,1.59e-39,10;CL:0000339,1.59e-39,10;CL:0002605,3.95e-23,2;CL:0002604,3.95e-23,2;CL:0000219,6.13e-10,54;CL:0002319,2.60e-09,43;CL:0000221,4.22e-09,44;CL:0000133,4.22e-09,44;CL:0002603,5.87e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.35e-07,73;UBERON:0001954,2.64e-07,7;UBERON:0003022,2.64e-07,7;UBERON:0002421,2.64e-07,7;UBERON:0000349,2.64e-07,7;UBERON:0002600,2.64e-07,7;UBERON:0001016,3.72e-07,75|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,3.70642765846759,2.63623419281366,3.11087838518853,1.53985063787899,2.87505128729943,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,1.19980546198682,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,2.13125464380219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p17@Slc3a2}} | ||
|EntrezGene=17254 | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|UniProt=P10852 | |||
|association_with_transcript=-303bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end | |||
|description=CAGE_peak_17_at_Slc3a2_5end | |||
|id=chr19:8788690..8788697,- | |||
|ontology_enrichment_celltype=CL:0002453!1.10e-13!8;CL:0000333!1.13e-10!10;CL:0000095!1.13e-10!10;CL:0000243!1.13e-10!10;CL:0000123!1.13e-10!10;CL:0000125!1.13e-10!10;CL:0000030!1.13e-10!10;CL:0000339!1.13e-10!10;CL:0000128!7.52e-10!6;CL:0000126!7.52e-10!6;CL:0000127!7.52e-10!6;CL:0000219!1.67e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.62e-49,8;CL:0000128,4.13e-46,6;CL:0000126,4.13e-46,6;CL:0000127,4.13e-46,6;CL:0000333,1.59e-39,10;CL:0000095,1.59e-39,10;CL:0000243,1.59e-39,10;CL:0000123,1.59e-39,10;CL:0000125,1.59e-39,10;CL:0000030,1.59e-39,10;CL:0000339,1.59e-39,10;CL:0002605,3.95e-23,2;CL:0002604,3.95e-23,2;CL:0000219,6.13e-10,54;CL:0002319,2.60e-09,43;CL:0000221,4.22e-09,44;CL:0000133,4.22e-09,44;CL:0002603,5.87e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.35e-07,73;UBERON:0001954,2.64e-07,7;UBERON:0003022,2.64e-07,7;UBERON:0002421,2.64e-07,7;UBERON:0000349,2.64e-07,7;UBERON:0002600,2.64e-07,7;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,3.70642765846759,2.63623419281366,3.11087838518853,1.53985063787899,2.87505128729943,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,1.19980546198682,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,2.13125464380219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p17@Slc3a2 | |||
}} |
Revision as of 18:27, 13 September 2013
Short description: | p17@Slc3a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Slc3a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | -303bp_to_ENSMUST00000010239, NM_008577, uc012bib.1_5end |
EntrezGene: | Slc3a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.62e-49 | 8 |
oligodendrocyte | 4.13e-46 | 6 |
macroglial cell | 4.13e-46 | 6 |
astrocyte | 4.13e-46 | 6 |
migratory neural crest cell | 1.59e-39 | 10 |
neuron associated cell | 1.59e-39 | 10 |
glial cell (sensu Vertebrata) | 1.59e-39 | 10 |
neuron associated cell (sensu Vertebrata) | 1.59e-39 | 10 |
glial cell | 1.59e-39 | 10 |
glioblast | 1.59e-39 | 10 |
glioblast (sensu Vertebrata) | 1.59e-39 | 10 |
astrocyte of the cerebral cortex | 3.95e-23 | 2 |
astrocyte of the hippocampus | 3.95e-23 | 2 |
motile cell | 6.13e-10 | 54 |
neural cell | 2.60e-09 | 43 |
ectodermal cell | 4.22e-09 | 44 |
neurectodermal cell | 4.22e-09 | 44 |
astrocyte of the cerebellum | 5.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.35e-07 | 73 |
Ammon's horn | 2.64e-07 | 7 |
lobe parts of cerebral cortex | 2.64e-07 | 7 |
hippocampal formation | 2.64e-07 | 7 |
limbic system | 2.64e-07 | 7 |
limbic lobe | 2.64e-07 | 7 |
nervous system | 3.72e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.