FFCP PHASE1:Mm9::chr1:122498955..122498968,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13798|HGNC=|MCL_coexpression_id=224|UniProt=P09065|association_with_transcript=-26bp_to_ENSMUST00000079721_5end|description=CAGE_peak_1_at_En1_5end|id=chr1:122498955..122498968,+|ontology_enrichment_celltype=CL:0000055!4.09e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!2.21e-09!13;UBERON:0004708!2.21e-09!13;UBERON:0002101!2.21e-09!13;UBERON:0004357!2.21e-09!13;UBERON:0009872!2.21e-09!13;UBERON:0004347!2.21e-09!13;UBERON:0005732!2.21e-09!13;UBERON:0005733!2.21e-09!13;UBERON:0003102!2.87e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.14e-13,12;UBERON:0004708,3.14e-13,12;UBERON:0002101,3.14e-13,12;UBERON:0004357,3.14e-13,12;UBERON:0004347,3.14e-13,12;UBERON:0005732,3.14e-13,12;UBERON:0005733,3.14e-13,12;UBERON:0010707,5.60e-12,13;UBERON:0003102,2.64e-11,22;UBERON:0002102,1.78e-09,7;UBERON:0004710,1.78e-09,7;UBERON:0005419,1.78e-09,7;UBERON:0005417,1.78e-09,7;UBERON:0005729,1.78e-09,7;UBERON:0010708,4.09e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,5.87986201073184,2.38610777810186,0,0.218025156380447,0,0,1.25987779462826,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,12.7459370341547,16.9277113367051,10.775133859605,0.677689064138264,0,0,0,0,2.39680088414724,1.92109152660777,0,0,0,1.14260393761521,0.662605622854841,0,0,0,7.70811166995721,2.042997409363,5.68344173048101,0.527545150920775,0.274462930807229,0,11.1673199600552,1.12552522006336,3.97275444219706,0.883885756421003,0.854230084794618,0.931997229126503,0,0.377857800533928,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0.884610551949874,3.23533699894818,3.3126227769059,2.90925151881133,0,0.878342391034642,1.25668024088073,0,0,0,0,4.49371918214468,0.457500602818626,0,0,0,2.70124457927428,1.29793010454206,0,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,2.37124792226126,1.70195472151037,2.11141348996739,1.31517439456545,5.56094498451196,4.179025998266,5.96768195583036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,8.0328123234571,7.06918596172244,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,1.15420377059036,2.74489525383039,1.74907482291652,2.02932984805332,0.820704498725306,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.358855426437903,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32119512269365,1.99512436700516,2.39027048055788,0.486213434136588,1.67690530102386,0,1.55572709461131,0.824140228955577,2.24643446714271,0.758091635291392,1.2673964994512,1.69763707247469,1.49826411951812,1.15245274328765,1.43588672389033,0,1.39061191133827,0.964546102318525,1.23625770240992,2.20798380201596,2.40008476669791,1.4198064492747,1.90748951957857,0.436039249896986,0.752875043322645,0.930760686808441,1.28049581010941,1.31534855718921,1.62964936615034,0,1.18635018124174,0.886540341380071,3.27384834535751,1.08455788830176,1.92906610981141,2.49810577937946,0.935726433781634,1.07435527024149,2.48674831689496,2.20591419119516,2.78241402744506|short_description=p1@En1}} | ||
|EntrezGene=13798 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=P09065 | |||
|association_with_transcript=-26bp_to_ENSMUST00000079721_5end | |||
|description=CAGE_peak_1_at_En1_5end | |||
|id=chr1:122498955..122498968,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!2.21e-09!13;UBERON:0004708!2.21e-09!13;UBERON:0002101!2.21e-09!13;UBERON:0004357!2.21e-09!13;UBERON:0009872!2.21e-09!13;UBERON:0004347!2.21e-09!13;UBERON:0005732!2.21e-09!13;UBERON:0005733!2.21e-09!13;UBERON:0003102!2.87e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.14e-13,12;UBERON:0004708,3.14e-13,12;UBERON:0002101,3.14e-13,12;UBERON:0004357,3.14e-13,12;UBERON:0004347,3.14e-13,12;UBERON:0005732,3.14e-13,12;UBERON:0005733,3.14e-13,12;UBERON:0010707,5.60e-12,13;UBERON:0003102,2.64e-11,22;UBERON:0002102,1.78e-09,7;UBERON:0004710,1.78e-09,7;UBERON:0005419,1.78e-09,7;UBERON:0005417,1.78e-09,7;UBERON:0005729,1.78e-09,7;UBERON:0010708,4.09e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,5.87986201073184,2.38610777810186,0,0.218025156380447,0,0,1.25987779462826,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,12.7459370341547,16.9277113367051,10.775133859605,0.677689064138264,0,0,0,0,2.39680088414724,1.92109152660777,0,0,0,1.14260393761521,0.662605622854841,0,0,0,7.70811166995721,2.042997409363,5.68344173048101,0.527545150920775,0.274462930807229,0,11.1673199600552,1.12552522006336,3.97275444219706,0.883885756421003,0.854230084794618,0.931997229126503,0,0.377857800533928,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0.884610551949874,3.23533699894818,3.3126227769059,2.90925151881133,0,0.878342391034642,1.25668024088073,0,0,0,0,4.49371918214468,0.457500602818626,0,0,0,2.70124457927428,1.29793010454206,0,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,2.37124792226126,1.70195472151037,2.11141348996739,1.31517439456545,5.56094498451196,4.179025998266,5.96768195583036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,8.0328123234571,7.06918596172244,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,1.15420377059036,2.74489525383039,1.74907482291652,2.02932984805332,0.820704498725306,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.358855426437903,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32119512269365,1.99512436700516,2.39027048055788,0.486213434136588,1.67690530102386,0,1.55572709461131,0.824140228955577,2.24643446714271,0.758091635291392,1.2673964994512,1.69763707247469,1.49826411951812,1.15245274328765,1.43588672389033,0,1.39061191133827,0.964546102318525,1.23625770240992,2.20798380201596,2.40008476669791,1.4198064492747,1.90748951957857,0.436039249896986,0.752875043322645,0.930760686808441,1.28049581010941,1.31534855718921,1.62964936615034,0,1.18635018124174,0.886540341380071,3.27384834535751,1.08455788830176,1.92906610981141,2.49810577937946,0.935726433781634,1.07435527024149,2.48674831689496,2.20591419119516,2.78241402744506 | |||
|short_description=p1@En1 | |||
}} |
Revision as of 18:36, 13 September 2013
Short description: | p1@En1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_En1_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -26bp_to_ENSMUST00000079721_5end |
EntrezGene: | En1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 3.14e-13 | 12 |
paired limb/fin | 3.14e-13 | 12 |
limb | 3.14e-13 | 12 |
paired limb/fin bud | 3.14e-13 | 12 |
limb bud | 3.14e-13 | 12 |
limb/fin field | 3.14e-13 | 12 |
limb field | 3.14e-13 | 12 |
appendage girdle complex | 5.60e-12 | 13 |
surface structure | 2.64e-11 | 22 |
forelimb | 1.78e-09 | 7 |
pectoral appendage | 1.78e-09 | 7 |
pectoral appendage bud | 1.78e-09 | 7 |
forelimb bud | 1.78e-09 | 7 |
forelimb/pectoral fin field | 1.78e-09 | 7 |
pectoral complex | 4.09e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.