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FFCP PHASE1:Mm9::chr1:129765361..129765384,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=226407|HGNC=|MCL_coexpression_id=614|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142662_5end|description=CAGE_peak_1_at_Rab3gap1_5end|id=chr1:129765361..129765384,+|ontology_enrichment_celltype=CL:0000838!2.30e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!5.44e-09!154;UBERON:0003408!5.25e-08!24;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0002370!1.55e-07!23;UBERON:0000974!1.55e-07!23;UBERON:0004807!1.55e-07!23;UBERON:0005058!1.55e-07!23;UBERON:0003351!1.55e-07!23;UBERON:0009113!1.55e-07!23;UBERON:0003295!1.55e-07!23;UBERON:0009722!1.55e-07!23;UBERON:0005562!1.55e-07!23;UBERON:0007690!1.55e-07!23;UBERON:0007023!2.36e-07!51;UBERON:0000153!4.77e-07!94;UBERON:0007811!5.49e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.25e-08,24;UBERON:0006562,7.43e-08,24;UBERON:0001557,7.43e-08,24;UBERON:0001042,7.43e-08,24;UBERON:0008814,7.43e-08,24;UBERON:0009145,7.43e-08,24;UBERON:0002370,1.55e-07,23;UBERON:0000974,1.55e-07,23;UBERON:0004807,1.55e-07,23;UBERON:0005058,1.55e-07,23;UBERON:0003351,1.55e-07,23;UBERON:0009113,1.55e-07,23;UBERON:0003295,1.55e-07,23;UBERON:0009722,1.55e-07,23;UBERON:0005562,1.55e-07,23;UBERON:0007690,1.55e-07,23;UBERON:0007023,2.36e-07,51;UBERON:0000077,2.74e-07,35|phase1_expression=15.2141404749554,16.0528687514106,15.4699741392442,16.9379958331825,19.5349334679075,8.89760141133016,12.8486952327539,48.4212462905911,57.864164804335,46.1107116854327,41.4347483105722,34.3020283679947,58.5506496364724,56.2113187554153,18.9872564234928,23.8920815519995,17.4890469532037,43.2183166540786,50.5952260005176,36.0731204028326,23.6420346619974,26.9078477754399,29.7767759618386,21.4389846543165,20.188016733911,12.6331032105304,11.630573896295,14.8675150553263,22.4227634958521,14.1136872665561,13.7472916606289,19.6859508772486,22.7573971406291,0,11.8429164098023,7.97926297720763,10.0042984568561,21.7636447983192,15.626706890476,20.4174260149781,16.4704816648684,15.7100461540443,23.3044969454954,27.8231967726026,27.574525291708,35.6080699193662,3.9119567217402,5.01457859675027,9.44650585758229,13.026803237977,13.5786828976602,1.43752564364972,61.9117816353047,63.8318684969983,64.1939156362106,17.2363822144084,22.9226751951005,23.2052441524849,13.3528864167335,15.869729378161,10.1413024560989,7.45457970552091,12.450127145556,7.19919773825119,3.9554654502679,4.9733608046227,4.49400165777607,5.76327457982332,13.894408049336,11.340498819862,10.9368979902719,11.4260393761521,13.4729809980484,13.229006315215,13.6100568845896,10.1114066527102,14.3150645299205,36.6462660304489,45.1603207773356,15.6944682398931,17.4741399280602,21.3574481928272,29.5933978941464,42.207195752376,42.9363076252836,12.9636577608414,27.7624777558251,18.4535451367048,14.9937862799704,17.3058872644539,35.3634676216047,17.2084775396277,20.3991400112325,15.6513925574967,31.8390444549358,42.1145273871495,23.1733293217391,20.1107780642108,26.2383864648897,16.9602995764963,12.3942209403479,34.6481489018658,17.8363667794652,7.11066703153331,17.3192832808971,17.4818307177818,20.2209778005913,23.7502469815645,79.2349923960345,32.0635020380021,12.6644288539279,12.7875500891099,21.2166257475574,23.6634545667617,34.4534911907615,22.6199864393416,44.0007042567185,39.0418263683761,19.4614321428972,20.544389943321,25.6176161414057,24.2437626567611,14.9113408974498,39.5254075965589,43.1460216035717,21.2029355823131,21.8063526600775,17.3971791988088,23.1267813272978,46.1355169366854,26.0775343606617,22.8690920845413,42.4131341269155,46.7959286914505,39.0641523771973,50.4570328140726,24.0340898686746,33.3410681235049,42.710146175291,34.9333480771547,17.3060189140396,13.104419952708,17.2859644613135,23.9620660358787,27.6228186554391,23.9572656932669,23.2380276908127,33.8901415668111,13.5807835547691,20.9907748986279,23.0495972654773,17.9740500590611,25.580346928755,27.163668988729,32.719359688863,23.8841120182192,14.0442637462647,17.4996576838006,19.0389544595047,17.8128164380532,21.8109235782419,22.1476335597048,23.2009840873506,25.7761143589099,27.1510118681786,28.3691412595498,20.9253253091703,39.4666857201033,32.0891707331287,34.6393349206891,31.7789733419754,29.6785974473425,28.9806152184187,33.1489854338118,46.6843685812362,17.9054025539955,26.7639214216876,17.7181879664575,15.1434657880016,21.3657738111603,19.5878541209582,16.5380490191141,18.2349995952794,21.6857213768317,20.8792787079585,23.5519505255336,24.3795152536261,19.6966907320739,25.3453313254856,33.2563181202062,27.0172562343368,21.9055400579804,13.2767530667157,16.7945313536301,22.5415471346161,15.2738495883986,22.1105835371093,27.8439204964565,27.2549475005549,28.6363687080428,35.4817124921507,39.7338867828198,24.0126627940591,15.8502850430289,18.0834275504147,15.9652099793246,17.6488305607998,17.1235783424216,18.5876871800436,21.577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|EntrezGene=226407
|HGNC=
|MCL_coexpression_id=614
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000142662_5end
|description=CAGE_peak_1_at_Rab3gap1_5end
|id=chr1:129765361..129765384,+
|ontology_enrichment_celltype=CL:0000838!2.30e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000477!5.44e-09!154;UBERON:0003408!5.25e-08!24;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0002370!1.55e-07!23;UBERON:0000974!1.55e-07!23;UBERON:0004807!1.55e-07!23;UBERON:0005058!1.55e-07!23;UBERON:0003351!1.55e-07!23;UBERON:0009113!1.55e-07!23;UBERON:0003295!1.55e-07!23;UBERON:0009722!1.55e-07!23;UBERON:0005562!1.55e-07!23;UBERON:0007690!1.55e-07!23;UBERON:0007023!2.36e-07!51;UBERON:0000153!4.77e-07!94;UBERON:0007811!5.49e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.25e-08,24;UBERON:0006562,7.43e-08,24;UBERON:0001557,7.43e-08,24;UBERON:0001042,7.43e-08,24;UBERON:0008814,7.43e-08,24;UBERON:0009145,7.43e-08,24;UBERON:0002370,1.55e-07,23;UBERON:0000974,1.55e-07,23;UBERON:0004807,1.55e-07,23;UBERON:0005058,1.55e-07,23;UBERON:0003351,1.55e-07,23;UBERON:0009113,1.55e-07,23;UBERON:0003295,1.55e-07,23;UBERON:0009722,1.55e-07,23;UBERON:0005562,1.55e-07,23;UBERON:0007690,1.55e-07,23;UBERON:0007023,2.36e-07,51;UBERON:0000077,2.74e-07,35
|phase1_expression=15.2141404749554,16.0528687514106,15.4699741392442,16.9379958331825,19.5349334679075,8.89760141133016,12.8486952327539,48.4212462905911,57.864164804335,46.1107116854327,41.4347483105722,34.3020283679947,58.5506496364724,56.2113187554153,18.9872564234928,23.8920815519995,17.4890469532037,43.2183166540786,50.5952260005176,36.0731204028326,23.6420346619974,26.9078477754399,29.7767759618386,21.4389846543165,20.188016733911,12.6331032105304,11.630573896295,14.8675150553263,22.4227634958521,14.1136872665561,13.7472916606289,19.6859508772486,22.7573971406291,0,11.8429164098023,7.97926297720763,10.0042984568561,21.7636447983192,15.626706890476,20.4174260149781,16.4704816648684,15.7100461540443,23.3044969454954,27.8231967726026,27.574525291708,35.6080699193662,3.9119567217402,5.01457859675027,9.44650585758229,13.026803237977,13.5786828976602,1.43752564364972,61.9117816353047,63.8318684969983,64.1939156362106,17.2363822144084,22.9226751951005,23.2052441524849,13.3528864167335,15.869729378161,10.1413024560989,7.45457970552091,12.450127145556,7.19919773825119,3.9554654502679,4.9733608046227,4.49400165777607,5.76327457982332,13.894408049336,11.340498819862,10.9368979902719,11.4260393761521,13.4729809980484,13.229006315215,13.6100568845896,10.1114066527102,14.3150645299205,36.6462660304489,45.1603207773356,15.6944682398931,17.4741399280602,21.3574481928272,29.5933978941464,42.207195752376,42.9363076252836,12.9636577608414,27.7624777558251,18.4535451367048,14.9937862799704,17.3058872644539,35.3634676216047,17.2084775396277,20.3991400112325,15.6513925574967,31.8390444549358,42.1145273871495,23.1733293217391,20.1107780642108,26.2383864648897,16.9602995764963,12.3942209403479,34.6481489018658,17.8363667794652,7.11066703153331,17.3192832808971,17.4818307177818,20.2209778005913,23.7502469815645,79.2349923960345,32.0635020380021,12.6644288539279,12.7875500891099,21.2166257475574,23.6634545667617,34.4534911907615,22.6199864393416,44.0007042567185,39.0418263683761,19.4614321428972,20.544389943321,25.6176161414057,24.2437626567611,14.9113408974498,39.5254075965589,43.1460216035717,21.2029355823131,21.8063526600775,17.3971791988088,23.1267813272978,46.1355169366854,26.0775343606617,22.8690920845413,42.4131341269155,46.7959286914505,39.0641523771973,50.4570328140726,24.0340898686746,33.3410681235049,42.710146175291,34.9333480771547,17.3060189140396,13.104419952708,17.2859644613135,23.9620660358787,27.6228186554391,23.9572656932669,23.2380276908127,33.8901415668111,13.5807835547691,20.9907748986279,23.0495972654773,17.9740500590611,25.580346928755,27.163668988729,32.719359688863,23.8841120182192,14.0442637462647,17.4996576838006,19.0389544595047,17.8128164380532,21.8109235782419,22.1476335597048,23.2009840873506,25.7761143589099,27.1510118681786,28.3691412595498,20.9253253091703,39.4666857201033,32.0891707331287,34.6393349206891,31.7789733419754,29.6785974473425,28.9806152184187,33.1489854338118,46.6843685812362,17.9054025539955,26.7639214216876,17.7181879664575,15.1434657880016,21.3657738111603,19.5878541209582,16.5380490191141,18.2349995952794,21.6857213768317,20.8792787079585,23.5519505255336,24.3795152536261,19.6966907320739,25.3453313254856,33.2563181202062,27.0172562343368,21.9055400579804,13.2767530667157,16.7945313536301,22.5415471346161,15.2738495883986,22.1105835371093,27.8439204964565,27.2549475005549,28.6363687080428,35.4817124921507,39.7338867828198,24.0126627940591,15.8502850430289,18.0834275504147,15.9652099793246,17.6488305607998,17.1235783424216,18.5876871800436,21.5772103088108,31.1299635408068,21.6903516418584,18.6898668485561,33.4926852901653,20.9065240986756,24.5001511608698,26.1920223741992,29.9114983245288,30.853782757823,15.5382957651798,19.066902243717,20.708900464573,20.4180516010997,26.8010011906905,28.0891496245496,28.099245291523,25.0639879128844,22.589398344175,29.0207678956627,27.2013102428125,28.8383919716046,31.8227928879325,21.1107797514981,21.7562273527484,42.2917274796371,51.0482980663755,43.3486592967038,44.6576525916294,20.8197380628378,29.0341566285029,17.9839685067266,18.7410597262386,19.8189525914175,20.3123478259669,19.6062833192507,18.9661275628518,17.4068601720205,16.9508397588561,19.7643888973262,47.2342335140056,28.2460769564455,15.1355763117167,30.4598613991187,28.044920905331,25.2215762845929,17.4802058031587,19.0463840887793,21.8781892516842,14.7650946440386,19.0609791725235,25.5844010236539,25.8108947929029,26.0243086220847,24.6508671189936,9.48767477174989,20.6271086496374,53.1085784975909,12.2441543941291,15.264324686365,20.1476812929697,29.2611385509751,24.6148968290857,30.1124707701881,28.0107753185431,31.2113371724735,20.9713750155182,34.622958494629,21.4352128823924,32.1314209124852,31.4230338875692,27.5750114647245,28.7246574553857,19.5292160542,39.4955893282386,20.3336348149445,18.9875918526165,22.9641213938442,24.6762678676145,23.5114071680163,24.4792645330979,35.5254918687158,31.489076772823,36.0701931629546,19.0934123603023,14.5514557047322,26.838169660744,23.3291536175091,20.2815647134035,19.4342681734098,28.4563770871972,27.4409473008115,20.6787194167383,31.3668235366139,42.8724126029979,14.0923234671048,18.8390848015413,17.8695169693665,17.1117045742762,20.1489324625261,19.0920421804579,31.9211689116451,20.1816796508123,24.5370865956163,21.2594026326885,28.5149706195287,40.4494234404068,20.8806971748869,23.0072544049213,27.6731352942703,30.4345382634718,33.5771489580338,44.7127072214284,40.7623095001833,48.8677617749034,46.1051180262749,50.1106140130097,39.762815341819,49.2604629198487,61.2434967431421,34.0095575422817,17.5368903165511,19.1987653144278,19.4746154982331,27.432922352571,24.3987218086537,27.2895920158225,30.0115730710692,43.1352009470412,33.885110557024,38.6673198666029,29.7905666988486,35.9173151098307,31.5137959094495,42.3020582538232,45.9015300157628,37.3766598676103,50.7519498062309,37.278742446131,10.4825221060018,22.7444177838588,20.1465654789878,22.6089246873513,15.0921477092147,10.8467669985508,24.6693867859793,16.8948746935893,20.5388294138762,19.96307972934,19.5179060915485,22.8237873077152,21.2566221956633,19.7837720931046,20.5618978861096,25.2435656380029,20.9750629960188,21.4129234714713,23.4888963457885,24.7294185825788,17.8292011240416,17.9250564220931,21.6976932852062,19.476419828732,23.621454484248,17.515223833577,21.0367168803688,23.413204317968,19.4199882799582,22.4456908663095,27.2860541685601,20.6859412988683,21.6892452879935,18.127610418758,19.8693809310576,20.7342779688495,23.8610240614317,23.6358159453128,29.6496914706707,22.9415075884296,20.6362373702175
|short_description=p1@Rab3gap1
}}

Revision as of 18:42, 13 September 2013

Short description:p1@Rab3gap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab3gap1_5end
Coexpression cluster:MCL_coexpression_mm9:614
Association with transcript: 0bp_to_ENSMUST00000142662_5end
EntrezGene:Rab3gap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab3gap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E948.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E757.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F246.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E458.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E856.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.89
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A243.22
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A450.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A636.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I929.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D220.19
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B922.42
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A261.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I963.83
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A164.19
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.16
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.94
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D914.99
Mouse Schwann, donor2.CNhs12573.11746-123F917.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H134.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.75
accessory axillary lymph node, adult.CNhs10475.1063-29H979.23
adrenal gland, adult.CNhs10508.49-24D732.06
adrenal gland, embryo E14.CNhs11038.406-44C512.66
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F523.66
adrenal gland, neonate N00.CNhs11191.1311-23C134.45
adrenal gland, neonate N25.CNhs11223.1377-27I322.62
amnion, adult pregnant day17.5.CNhs10488.583-22A844.00
aorta, adult.CNhs10498.46-23H139.04
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F520.54
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B239.53
cerebellum, neonate N30.CNhs11135.1395-42I243.15
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.13
corpora quadrigemina, adult.CNhs10501.16-22A446.14
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F122.87
cortex, adult.CNhs10473.12-14D542.41
cortex, neonate N30.CNhs11107.1392-42F246.80
diencephalon, adult.CNhs10482.20-12F239.06
diencephalon, neonate N30.CNhs11201.1388-42B250.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.03
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.34
epididymis, adult.CNhs10490.58-23B242.71
eyeball, adult.CNhs10484.31-12G434.93
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D423.96
eyeball, neonate N00.CNhs11207.633-15C627.62
eyeball, neonate N01.CNhs11140.1532-43E723.96
eyeball, neonate N02.CNhs11205.1551-44G823.24
eyeball, neonate N16.CNhs11188.777-19A233.89
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H220.99
forelimb, embryo E13.CNhs10589.384-1E223.05
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E725.58
forelimb, embryo E17.CNhs10598.1517-43C427.16
forelimb, embryo E18.CNhs11008.1520-43B532.72
gonad, embryo E13.CNhs11044.1564-45I623.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.04
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.50
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.04
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I922.15
heart, embryo E14.CNhs10597.403-26D423.20
heart, embryo E15.CNhs11017.431-16C825.78
heart, embryo E16.CNhs11021.457-17C627.15
heart, embryo E17.CNhs11025.479-18E528.37
heart, embryo E18.CNhs11030.1283-20G320.93
heart, neonate N00.CNhs11213.639-21E339.47
heart, neonate N03.CNhs11221.1349-25I232.09
heart, neonate N10.CNhs11118.749-24G134.64
heart, neonate N16.CNhs11209.782-15G131.78
heart, neonate N20.CNhs11127.821-26I629.68
heart, neonate N25.CNhs11196.1351-25D328.98
heart, neonate N30.CNhs11202.1390-42D233.15
hippocampus, adult.CNhs10478.13-16E846.68
hippocampus, neonate N00.CNhs11228.627-43G117.91
intestinal mucosa, adult.CNhs10506.860-29I326.76
intestine, adult.CNhs10496.178-9A317.72
intestine, embryo E12.CNhs11019.1251-16I515.14
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D819.59
intestine, embryo E16.CNhs10585.463-22H416.54
intestine, embryo E17.CNhs10582.482-18D318.23
intestine, embryo E18.CNhs10526.1289-20F721.69
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B824.38
intestine, neonate N07.CNhs11095.720-20F219.70
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E327.02
intestine, neonate N30.CNhs11131.1384-42G121.91
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F816.79
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I215.27
kidney, embryo E18.CNhs11001.1288-20C722.11
kidney, neonate N00.CNhs11214.646-21G727.84
kidney, neonate N10.CNhs11206.758-6D527.25
kidney, neonate N20.CNhs11113.832-19I128.64
kidney, neonate N25.CNhs11122.1353-25F335.48
kidney, neonate N30.CNhs11203.1385-42H139.73
liver, adult pregnant day01.CNhs10466.508-5B224.01
liver, embryo E12.CNhs10601.355-15F815.85
liver, embryo E13.CNhs10524.378-3H618.08
liver, embryo E14.CNhs10594.409-16E115.97
liver, embryo E15.CNhs10520.433-16D717.65
liver, embryo E16.CNhs10523.462-17F517.12
liver, embryo E17.CNhs10510.481-18A318.59
liver, embryo E18.CNhs10579.499-43G421.58
liver, neonate N00.CNhs11117.641-24F431.13
liver, neonate N03.CNhs11123.1345-25G221.69
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H233.49
liver, neonate N10.CNhs11115.751-24B920.91
liver, neonate N20.CNhs11220.823-25A324.50
liver, neonate N25.CNhs11198.1368-26H126.19
liver, neonate N30.CNhs11106.1382-42D129.91
lung, adult.CNhs10474.28-22B130.85
lung, embryo E12.CNhs10522.354-16G215.54
lung, embryo E14.CNhs10604.404-26F819.07
lung, embryo E15.CNhs11020.432-17C520.71
lung, embryo E16.CNhs10998.458-17B620.42
lung, embryo E17.CNhs10605.480-44A626.80
lung, embryo E18.CNhs10583.1287-20I628.09
lung, neonate N00.CNhs11224.640-42C628.10
lung, neonate N06.CNhs11212.683-20E525.06
lung, neonate N07.CNhs11111.715-19A322.59
lung, neonate N10.CNhs11219.750-23E629.02
lung, neonate N20.CNhs11109.822-18A427.20
lung, neonate N25.CNhs11119.1359-25C728.84
lung, neonate N30.CNhs11133.1394-42H231.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B642.29
mammary gland, adult pregnant day19.CNhs10476.588-5H251.05
medulla oblongata, adult.CNhs10477.17-12C243.35
medulla oblongata, neonate N30.CNhs11200.1396-42A344.66
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.97
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I947.23
ovary, adult.CNhs10507.91-2I728.25
ovary, embryo E18.CNhs11040.505-44H715.14
ovary, neonate N00.CNhs11217.1299-22I430.46
oviduct, adult pregnant day01.CNhs10500.988-6G628.04
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F417.48
pancreas, embryo E15.CNhs11042.1556-45F219.05
pancreas, embryo E16.CNhs11003.460-26E521.88
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D725.81
pancreas, neonate N02.CNhs11139.1539-43D826.02
pancreas, neonate N16.CNhs11136.787-43B624.65
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G853.11
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C715.26
pituitary gland, embryo E14.CNhs11037.398-44A520.15
pituitary gland, embryo E15.CNhs10592.427-16B929.26
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F530.11
pituitary gland, neonate N00.CNhs11190.1308-22E928.01
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G320.97
prostate, adult.CNhs10470.859-1F834.62
skin, adult.CNhs10492.30-1C321.44
skin, neonate N00.CNhs11124.650-25G432.13
skin, neonate N03.CNhs11215.662-22H331.42
skin, neonate N06.CNhs11097.693-20I527.58
skin, neonate N10.CNhs11108.762-6C428.72
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C939.50
spleen, adult.CNhs10465.25-2G220.33
spleen, embryo E16.CNhs11035.461-43C118.99
spleen, embryo E18.CNhs11011.1271-21F222.96
spleen, neonate N10.CNhs11116.752-24D124.68
spleen, neonate N20.CNhs11112.824-19H123.51
spleen, neonate N25.CNhs11099.1354-25G324.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.07
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E314.55
stomach, embryo E15.CNhs10603.1252-16G826.84
stomach, embryo E16.CNhs11022.459-17D423.33
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C619.43
stomach, neonate N03.CNhs11193.1340-24B828.46
stomach, neonate N07.CNhs11210.718-18A927.44
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I131.37
submandibular gland, adult.CNhs10469.59-29C142.87
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F518.84
testis, embryo E15.CNhs11034.443-27C517.87
testis, embryo E16.CNhs11033.470-26G517.11
testis, embryo E17.CNhs11029.486-18I520.15
testis, embryo E18.CNhs11027.503-18G519.09
testis, neonate N00.CNhs11189.1300-22B731.92
testis, neonate N07.CNhs11222.726-26I420.18
testis, neonate N10.CNhs11204.763-44D924.54
testis, neonate N20.CNhs11110.839-18H321.26
testis, neonate N30.CNhs11130.1391-42E228.51
thymus, adult.CNhs10471.38-12B540.45
thymus, embryo E14.CNhs11041.402-44I420.88
thymus, embryo E15.CNhs11005.430-45I223.01
thymus, embryo E16.CNhs11002.456-26C527.67
thymus, embryo E17.CNhs10581.478-18C130.43
thymus, embryo E18.CNhs10595.1273-19G433.58
thymus, neonate N02.CNhs11181.1541-43F844.71
thymus, neonate N03.CNhs11137.2104-43C740.76
thymus, neonate N06.CNhs11197.681-26C448.87
thymus, neonate N07.CNhs11211.713-19D346.11
thymus, neonate N10.CNhs11194.748-24E450.11
thymus, neonate N20.CNhs11186.820-7A239.76
thymus, neonate N25.CNhs11125.1362-25G749.26
thymus, neonate N30.CNhs11132.1393-42G261.24
tongue, adult.CNhs10499.32-1B434.01
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E427.43
uterus, adult pregnant day19.CNhs10497.590-15F524.40
uterus, adult.CNhs10509.92-27E527.29
vagina, adult.CNhs10502.89-27D530.01
vesicular gland, adult.CNhs10491.51-27F843.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I810.48
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H220.15
whole body, embryo E14.5.CNhs10578.420-27D222.61
whole body, embryo E14.CNhs10519.395-14B115.09
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.13
whole body, embryo E17.5.CNhs10513.490-9F919.87
whole body, embryo E17.CNhs10517.475-3I520.73
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C223.64
whole body, neonate N01.CNhs10576.659-23C629.65
whole body, neonate N06.CNhs10515.692-21D122.94
whole body, neonate N10.CNhs10518.761-6B420.64





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.30e-0712







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