FFCP PHASE1:Mm9::chr1:156906816..156906840,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:156906816..156906840,+|id=chr1:156906816..156906840,+|ontology_enrichment_celltype=CL:0000988!3.39e-11!32;CL:0002032!3.39e-11!32;CL:0000037!3.39e-11!32;CL:0000566!3.39e-11!32;CL:0000837!3.39e-11!32;CL:0002031!2.82e-09!25;CL:0000838!7.98e-08!12;CL:0000084!5.45e-07!11;CL:0000827!5.45e-07!11;CL:0000542!5.62e-07!13;CL:0000051!5.62e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,2.33e-09,25;CL:0000839,6.23e-08,13;CL:0000050,1.02e-07,9;CL:0000988,4.47e-07,32;CL:0002032,4.47e-07,32;CL:0000037,4.47e-07,32;CL:0000837,4.47e-07,32;CL:0000553,7.12e-07,6;CL:0000556,7.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,9.79e-07,6|ontology_enrichment_uberon=UBERON:0002193!1.66e-07!48|ontology_enrichment_uberon_v019_2=|phase1_expression=0,1.39590163055744,0,0,0.500895729946347,1.00727563147134,1.16806320297763,0.129123323441576,0.84473233291,1.17032263160997,0.34243593645101,0.478632953972018,0.342401459862411,0.0874204024189974,0.666219523631325,0.404950534779652,0,1.57731082679119,2.19383093769182,1.69755860719212,0,0.595745707205312,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,1.7230479846363,1.29282739611533,0,0,0.886922042621219,1.90509202037889,0,0,0,0,0,0.418531630736908,2.3440060335714,1.0470474879476,14.7057872007754,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,3.5384422077995,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.820165366326151,0.228778173206523,0,0,0.276399947608848,0,0,0,0,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,1.35004500046361,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr1:156906816..156906840,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:156906816..156906840,+ | |||
|id=chr1:156906816..156906840,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.39e-11!32;CL:0002032!3.39e-11!32;CL:0000037!3.39e-11!32;CL:0000566!3.39e-11!32;CL:0000837!3.39e-11!32;CL:0002031!2.82e-09!25;CL:0000838!7.98e-08!12;CL:0000084!5.45e-07!11;CL:0000827!5.45e-07!11;CL:0000542!5.62e-07!13;CL:0000051!5.62e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.33e-09,25;CL:0000839,6.23e-08,13;CL:0000050,1.02e-07,9;CL:0000988,4.47e-07,32;CL:0002032,4.47e-07,32;CL:0000037,4.47e-07,32;CL:0000837,4.47e-07,32;CL:0000553,7.12e-07,6;CL:0000556,7.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,9.79e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.66e-07!48 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,1.39590163055744,0,0,0.500895729946347,1.00727563147134,1.16806320297763,0.129123323441576,0.84473233291,1.17032263160997,0.34243593645101,0.478632953972018,0.342401459862411,0.0874204024189974,0.666219523631325,0.404950534779652,0,1.57731082679119,2.19383093769182,1.69755860719212,0,0.595745707205312,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,1.7230479846363,1.29282739611533,0,0,0.886922042621219,1.90509202037889,0,0,0,0,0,0.418531630736908,2.3440060335714,1.0470474879476,14.7057872007754,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,3.5384422077995,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.820165366326151,0.228778173206523,0,0,0.276399947608848,0,0,0,0,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,1.35004500046361,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr1:156906816..156906840,+ | |||
}} |
Revision as of 19:18, 13 September 2013
Short description: | p@chr1:156906816..156906840, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156906816..156906840, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.33e-09 | 25 |
myeloid lineage restricted progenitor cell | 6.23e-08 | 13 |
megakaryocyte-erythroid progenitor cell | 1.02e-07 | 9 |
hematopoietic cell | 4.47e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.47e-07 | 32 |
hematopoietic stem cell | 4.47e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.47e-07 | 32 |
megakaryocyte progenitor cell | 7.12e-07 | 6 |
megakaryocyte | 7.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 9.79e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.