FFCP PHASE1:Mm9::chr1:162836503..162836591,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381305|HGNC=|UniProt=Q4VGL6|association_with_transcript=0bp_to_ENSMUST00000161609,NM_001024952,uc007del.2_5end|description=CAGE_peak_1_at_Rc3h1_5end|id=chr1:162836503..162836591,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=19.5381593467849,37.3403686174116,29.1199513209303,51.4189159221611,48.0859900748493,24.8461322429597,15.8856595604957,16.5277854005218,30.832730151215,30.8965174745031,15.7520530767465,21.4587107697455,19.5168832121575,17.3092396789615,15.6561588053361,18.4252493324742,18.88817070946,19.2431920868525,17.6877619351403,16.9755860719212,22.7916017604867,10.8227136808965,8.097193463307,15.0392877425802,12.6175104586944,29.285830169866,26.2764817657036,18.5305260109865,18.4322716872683,25.455043105753,14.4124831925948,10.1604907753541,13.5314253268605,0,15.0202842270663,16.1247605997738,16.1293791447272,23.4377713212668,23.440060335714,36.6466620781659,27.0586484494267,32.1031377930469,26.7030694167134,10.4494358919729,11.9624778839027,15.4179271815813,3.9119567217402,3.48840250208714,5.93152693383074,6.41618666945135,4.05960622713551,1.43752564364972,25.3351735147182,26.1130371124084,24.1987535382574,11.0621557495457,13.4670716771216,15.9858348606007,14.7691016427506,11.6378015439847,9.50747105259269,4.06613438482959,1.77858959222228,3.5995988691256,2.96659908770092,5.6838409195688,4.19440154725767,3.45796474789399,17.4198548678242,11.0704869431986,11.7781978356774,10.5690864229407,8.61387309711293,9.18680994112155,13.1308295294984,12.8690630125403,9.91042928994498,19.5361627270337,18.1255709242367,12.1335384711778,14.5465353327831,15.6274011167028,12.0048689570594,18.0084035210138,19.0997809721013,14.142172102736,14.0947963991112,13.6071595452469,14.9937862799704,15.3410267016775,28.6965843814661,7.74381489283248,14.2793980078628,7.55584468292944,7.14754059192436,12.5447528387254,13.3422199125164,8.862376774059,4.93593408745451,6.00677276667578,19.2955485094052,20.5322363862909,28.028576367731,7.11066703153331,8.22665955842614,9.62767488805375,13.6491600153991,17.9268691158924,16.8309624370662,16.4770774361956,9.36820764537134,6.08930956624282,10.6083128737787,10.8520301197888,18.4614270203057,14.325991411583,29.9105910958592,16.33972733195,15.0383793831479,15.8531512948461,20.5382612168166,18.9101348722737,13.0474232852686,21.3729981818429,19.6879904404648,18.13745091981,24.5621005237137,16.7972764678154,19.568814969252,10.6351353977424,11.4375150704657,18.0942267042525,10.4294592115366,12.7857728665165,12.6750707181332,14.4394724130304,17.2108524907035,17.5413828560231,6.57079171927554,17.4666740385773,12.6216829673823,11.4951052216736,12.0641626969584,18.8381022294644,18.7780737657665,15.373646434182,20.8954845768195,11.1242449417777,12.9340795759705,16.6413350547681,13.0203831881322,10.302199424096,15.0145514581823,21.9398864908965,10.906453229621,12.7381930763836,10.5331978096985,14.6688307055388,14.2081749697796,16.9843133479112,8.67746421930056,12.604344302271,13.9679393995274,14.7573173810553,16.1980468531747,13.4869687955237,17.4377710909752,20.2004042295203,14.8103864922132,19.2075932972541,19.9429271482805,18.8597983778679,11.4166059951346,23.0835040267839,13.6688466566683,13.1717903845484,28.0855965536228,14.0158800331678,13.8637362847902,15.3276203427889,16.3661675879059,15.7313149206207,14.4545728499166,12.5548913234289,18.506633400236,10.5407331023367,16.5881237808178,12.9321706826748,17.9366960149591,19.7740269903929,21.18152888772,23.1003876975066,9.48339504765408,11.3106027483632,7.88954149711563,12.8300336542548,13.1887691273986,19.0068071902763,17.2635746349222,18.0084380535115,14.1298855057237,11.5993334086492,13.6368208460088,14.5155241973002,15.528160613943,14.6160373050155,18.8659912891308,20.0177042594506,17.3145579211365,12.6586300478357,18.9698215326791,10.158772287959,12.9391385874619,9.67566463938109,12.793544597697,11.36604950762,9.50806291666135,14.9557491622644,20.3228509183265,12.885416000393,15.4816727619925,12.2216461758135,14.7854856421756,18.9282070909252,19.5195785526531,27.123577052234,14.9753386900881,21.0391455166336,24.874943910568,19.99132439532,19.1680329871144,24.1563927831124,16.5870412333199,7.61467957346193,12.2941068254759,14.0727740615414,11.2385412991454,16.8784828692773,12.622990794004,27.0143892108679,11.6738041184015,9.37052986311932,15.2950612390287,11.4705023017225,16.0415045339324,17.2676683781188,12.1443210502468,15.7818163272108,13.0444966722353,13.8168166061377,15.329529202493,10.5058706163681,24.9217047810971,17.8167732810338,11.9470624505967,8.98288353773431,11.1859716076958,12.2593301841334,8.26845300066164,15.6791925451403,16.5394107627662,13.8142817201452,16.3988794056972,18.3301319602773,15.8127912862498,15.470331487228,19.4050575279659,12.4242154881604,5.6917820864412,10.502514716548,15.4286003268778,13.1992925025532,14.6448628335888,9.1339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| ||
|EntrezGene=381305 | |||
|HGNC= | |||
|UniProt=Q4VGL6 | |||
|association_with_transcript=0bp_to_ENSMUST00000161609,NM_001024952,uc007del.2_5end | |||
|description=CAGE_peak_1_at_Rc3h1_5end | |||
|id=chr1:162836503..162836591,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=19.5381593467849,37.3403686174116,29.1199513209303,51.4189159221611,48.0859900748493,24.8461322429597,15.8856595604957,16.5277854005218,30.832730151215,30.8965174745031,15.7520530767465,21.4587107697455,19.5168832121575,17.3092396789615,15.6561588053361,18.4252493324742,18.88817070946,19.2431920868525,17.6877619351403,16.9755860719212,22.7916017604867,10.8227136808965,8.097193463307,15.0392877425802,12.6175104586944,29.285830169866,26.2764817657036,18.5305260109865,18.4322716872683,25.455043105753,14.4124831925948,10.1604907753541,13.5314253268605,0,15.0202842270663,16.1247605997738,16.1293791447272,23.4377713212668,23.440060335714,36.6466620781659,27.0586484494267,32.1031377930469,26.7030694167134,10.4494358919729,11.9624778839027,15.4179271815813,3.9119567217402,3.48840250208714,5.93152693383074,6.41618666945135,4.05960622713551,1.43752564364972,25.3351735147182,26.1130371124084,24.1987535382574,11.0621557495457,13.4670716771216,15.9858348606007,14.7691016427506,11.6378015439847,9.50747105259269,4.06613438482959,1.77858959222228,3.5995988691256,2.96659908770092,5.6838409195688,4.19440154725767,3.45796474789399,17.4198548678242,11.0704869431986,11.7781978356774,10.5690864229407,8.61387309711293,9.18680994112155,13.1308295294984,12.8690630125403,9.91042928994498,19.5361627270337,18.1255709242367,12.1335384711778,14.5465353327831,15.6274011167028,12.0048689570594,18.0084035210138,19.0997809721013,14.142172102736,14.0947963991112,13.6071595452469,14.9937862799704,15.3410267016775,28.6965843814661,7.74381489283248,14.2793980078628,7.55584468292944,7.14754059192436,12.5447528387254,13.3422199125164,8.862376774059,4.93593408745451,6.00677276667578,19.2955485094052,20.5322363862909,28.028576367731,7.11066703153331,8.22665955842614,9.62767488805375,13.6491600153991,17.9268691158924,16.8309624370662,16.4770774361956,9.36820764537134,6.08930956624282,10.6083128737787,10.8520301197888,18.4614270203057,14.325991411583,29.9105910958592,16.33972733195,15.0383793831479,15.8531512948461,20.5382612168166,18.9101348722737,13.0474232852686,21.3729981818429,19.6879904404648,18.13745091981,24.5621005237137,16.7972764678154,19.568814969252,10.6351353977424,11.4375150704657,18.0942267042525,10.4294592115366,12.7857728665165,12.6750707181332,14.4394724130304,17.2108524907035,17.5413828560231,6.57079171927554,17.4666740385773,12.6216829673823,11.4951052216736,12.0641626969584,18.8381022294644,18.7780737657665,15.373646434182,20.8954845768195,11.1242449417777,12.9340795759705,16.6413350547681,13.0203831881322,10.302199424096,15.0145514581823,21.9398864908965,10.906453229621,12.7381930763836,10.5331978096985,14.6688307055388,14.2081749697796,16.9843133479112,8.67746421930056,12.604344302271,13.9679393995274,14.7573173810553,16.1980468531747,13.4869687955237,17.4377710909752,20.2004042295203,14.8103864922132,19.2075932972541,19.9429271482805,18.8597983778679,11.4166059951346,23.0835040267839,13.6688466566683,13.1717903845484,28.0855965536228,14.0158800331678,13.8637362847902,15.3276203427889,16.3661675879059,15.7313149206207,14.4545728499166,12.5548913234289,18.506633400236,10.5407331023367,16.5881237808178,12.9321706826748,17.9366960149591,19.7740269903929,21.18152888772,23.1003876975066,9.48339504765408,11.3106027483632,7.88954149711563,12.8300336542548,13.1887691273986,19.0068071902763,17.2635746349222,18.0084380535115,14.1298855057237,11.5993334086492,13.6368208460088,14.5155241973002,15.528160613943,14.6160373050155,18.8659912891308,20.0177042594506,17.3145579211365,12.6586300478357,18.9698215326791,10.158772287959,12.9391385874619,9.67566463938109,12.793544597697,11.36604950762,9.50806291666135,14.9557491622644,20.3228509183265,12.885416000393,15.4816727619925,12.2216461758135,14.7854856421756,18.9282070909252,19.5195785526531,27.123577052234,14.9753386900881,21.0391455166336,24.874943910568,19.99132439532,19.1680329871144,24.1563927831124,16.5870412333199,7.61467957346193,12.2941068254759,14.0727740615414,11.2385412991454,16.8784828692773,12.622990794004,27.0143892108679,11.6738041184015,9.37052986311932,15.2950612390287,11.4705023017225,16.0415045339324,17.2676683781188,12.1443210502468,15.7818163272108,13.0444966722353,13.8168166061377,15.329529202493,10.5058706163681,24.9217047810971,17.8167732810338,11.9470624505967,8.98288353773431,11.1859716076958,12.2593301841334,8.26845300066164,15.6791925451403,16.5394107627662,13.8142817201452,16.3988794056972,18.3301319602773,15.8127912862498,15.470331487228,19.4050575279659,12.4242154881604,5.6917820864412,10.502514716548,15.4286003268778,13.1992925025532,14.6448628335888,9.13394847343798,16.6616912725234,24.5725202202031,18.9654422327267,15.6641940294406,17.5996225098537,17.7319999288778,22.0838836405802,20.8458942676228,18.6547735443104,15.2048747648618,16.7453463181896,13.8279201535359,14.6303676622072,18.271740329455,18.5904149700594,19.6749228957609,26.0066997890599,31.908931129794,29.98939431556,12.4107180341965,14.2351197111511,15.4522795016405,15.01274237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| |||
|short_description=p1@Rc3h1 | |||
}} | |||
Revision as of 19:25, 13 September 2013
| Short description: | p1@Rc3h1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rc3h1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000161609, NM_001024952, uc007del.2_5end |
| EntrezGene: | Rc3h1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
