FFCP PHASE1:Mm9::chr1:33871319..33871333,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=98403|HGNC=|UniProt=|association_with_transcript=45bp_to_ENSMUST00000125723_5end|description=CAGE_peak_3_at_Zfp451_5end|id=chr1:33871319..33871333,-|ontology_enrichment_celltype=CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39;CL:0000540!5.88e-07!33;CL:0000047!5.88e-07!33;CL:0000031!5.88e-07!33;CL:0000404!5.88e-07!33|ontology_enrichment_celltype_v019_2=CL:0000393,1.08e-07,39;CL:0000211,1.08e-07,39;CL:0000540,3.02e-07,33;CL:0000047,3.02e-07,33;CL:0000031,3.02e-07,33;CL:0000404,3.02e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.52e-12!71;UBERON:0003075!4.52e-12!71;UBERON:0007284!4.52e-12!71;UBERON:0000073!4.77e-11!75;UBERON:0001016!4.77e-11!75;UBERON:0000033!4.99e-11!63;UBERON:0003056!6.26e-11!49;UBERON:0001017!7.18e-11!73;UBERON:0005743!7.18e-11!73;UBERON:0004121!5.07e-10!102;UBERON:0000924!5.07e-10!102;UBERON:0006601!5.07e-10!102;UBERON:0001049!1.33e-09!52;UBERON:0005068!1.33e-09!52;UBERON:0006241!1.33e-09!52;UBERON:0007135!1.33e-09!52;UBERON:0000955!1.64e-09!50;UBERON:0006238!1.64e-09!50;UBERON:0002616!1.66e-09!49;UBERON:0000153!3.06e-09!94;UBERON:0003080!1.80e-08!40;UBERON:0002780!3.38e-08!39;UBERON:0001890!3.38e-08!39;UBERON:0006240!3.38e-08!39;UBERON:0007811!1.40e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.32e-13,64;UBERON:0003075,1.32e-13,64;UBERON:0007284,1.32e-13,64;UBERON:0001016,4.40e-12,75;UBERON:0001017,6.78e-12,73;UBERON:0010371,2.50e-11,73;UBERON:0004121,2.86e-11,95;UBERON:0000924,2.86e-11,95;UBERON:0006601,2.86e-11,95;UBERON:0010314,3.10e-11,92;UBERON:0003056,4.16e-11,49;UBERON:0000073,5.91e-11,54;UBERON:0001049,4.07e-10,52;UBERON:0005068,4.07e-10,52;UBERON:0006241,4.07e-10,52;UBERON:0007135,4.07e-10,52;UBERON:0000955,2.90e-09,47;UBERON:0006238,2.90e-09,47;UBERON:0002616,2.93e-09,46;UBERON:0003080,1.02e-08,40;UBERON:0002780,1.99e-08,39;UBERON:0001890,1.99e-08,39;UBERON:0006240,1.99e-08,39|phase1_expression=1.60148847104794,0,0.454999239389536,0.60492842261366,0,0.16787927191189,0.700837921786577,1.03298658753261,1.68946466582,1.87251621057595,1.02730780935303,1.03703806693937,0.856003649656029,0.786783621770977,0.333109761815663,0.404950534779652,0.699561878128147,0,1.09691546884591,0,2.04103896362567,0.992909512008853,0.783599367416806,0.639969691173627,0,0,0.86152399231815,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.866554859253824,0.166234645358492,0,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0,1.6366586336825,1.52065396829272,1.46837401729345,2.34717403304412,0,0.219686182734472,0.972149495371417,0.55994568650145,0,0.335565212115473,1.45072428402269,1.68046899571232,1.02903774414379,2.57880095944881,4.12537673821954,4.24864567805155,3.1739458756322,3.80298842103708,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0,2.17748185847803,1.21505344498522,1.68259969081106,0.571301968807607,1.98781686856452,3.1847607795888,2.1086003624012,1.83843757322004,2.20231761998777,1.65993539510744,3.37934373163736,3.95658863190582,2.56165402086747,4.68822033501084,1.3959149950069,1.12552522006336,1.22238598221448,2.65165726926301,3.13217697758026,4.10078780815661,1.96888102666279,1.5870027622425,1.15945795480671,0.860423876981386,0.679971333707751,1.61910957491345,0,0,1.12355536105401,0.340860645156116,1.29893002301434,1.06001872353102,1.83096445709685,3.84979432242953,5.09610479413291,0,0.216491041011214,0.506719730950197,0,0.68510327831436,1.55362730188303,1.03909497345377,0.867426633830679,1.82679286987285,1.38369298353635,1.65794904607885,1.52865319276416,0.753999547978053,0.247194967734374,0.722996784599558,0.884610551949874,1.45590164952668,0.883366073841574,0.969750506270444,0,2.92780797011547,2.09446706813455,0.510914110417183,0.838705871541442,2.39961092397363,0.889491589511453,2.39665023047716,5.03250663100489,2.89005009859588,1.21677024134594,3.58001640262463,3.32460871295296,2.27137768294861,2.24046600470696,0.995255764880744,0.758168275301024,0.841767423545896,2.99277018814219,2.29902104433473,3.06105620669094,3.31550599238573,2.58538696775046,3.97152532883034,2.34254311399322,2.06962696591213,2.58681591519411,3.21480336285293,4.39877810409872,2.6303487891309,2.50242524303038,0.696504333044333,2.46938563689532,1.99034266818493,0,1.02939162845886,0.852490498186778,1.65700618028402,1.64168241986767,1.44049649168812,1.65721314909647,1.96764231747404,2.1597395804233,2.09280550275367,0.804820204198858,1.28441876603886,0.987359099480883,1.64167464079095,0.486412857275134,1.02339991197733,0.658650345873152,1.8788898626452,2.10289948564127,3.91037527041281,0.660837565967596,0.528901133327089,2.55945900642281,2.55460339046482,1.67527699718721,1.21010114774006,1.11189021922435,1.33157938278791,0,1.15289268306808,0,0.596869416123452,0.779856348476481,0,0.216138049874694,0.796565093017469,1.51734320762465,1.5994791765362,0,3.46207257337034,0.969762435838129,1.19230893813542,0.822074982615345,1.18088118383682,0.941992367048249,0.616985819609003,0.2964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| ||
|EntrezGene=98403 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENSMUST00000125723_5end | |||
|description=CAGE_peak_3_at_Zfp451_5end | |||
|id=chr1:33871319..33871333,- | |||
|ontology_enrichment_celltype=CL:0000393!2.22e-07!39;CL:0000211!2.22e-07!39;CL:0000540!5.88e-07!33;CL:0000047!5.88e-07!33;CL:0000031!5.88e-07!33;CL:0000404!5.88e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.08e-07,39;CL:0000211,1.08e-07,39;CL:0000540,3.02e-07,33;CL:0000047,3.02e-07,33;CL:0000031,3.02e-07,33;CL:0000404,3.02e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.52e-12!71;UBERON:0003075!4.52e-12!71;UBERON:0007284!4.52e-12!71;UBERON:0000073!4.77e-11!75;UBERON:0001016!4.77e-11!75;UBERON:0000033!4.99e-11!63;UBERON:0003056!6.26e-11!49;UBERON:0001017!7.18e-11!73;UBERON:0005743!7.18e-11!73;UBERON:0004121!5.07e-10!102;UBERON:0000924!5.07e-10!102;UBERON:0006601!5.07e-10!102;UBERON:0001049!1.33e-09!52;UBERON:0005068!1.33e-09!52;UBERON:0006241!1.33e-09!52;UBERON:0007135!1.33e-09!52;UBERON:0000955!1.64e-09!50;UBERON:0006238!1.64e-09!50;UBERON:0002616!1.66e-09!49;UBERON:0000153!3.06e-09!94;UBERON:0003080!1.80e-08!40;UBERON:0002780!3.38e-08!39;UBERON:0001890!3.38e-08!39;UBERON:0006240!3.38e-08!39;UBERON:0007811!1.40e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.32e-13,64;UBERON:0003075,1.32e-13,64;UBERON:0007284,1.32e-13,64;UBERON:0001016,4.40e-12,75;UBERON:0001017,6.78e-12,73;UBERON:0010371,2.50e-11,73;UBERON:0004121,2.86e-11,95;UBERON:0000924,2.86e-11,95;UBERON:0006601,2.86e-11,95;UBERON:0010314,3.10e-11,92;UBERON:0003056,4.16e-11,49;UBERON:0000073,5.91e-11,54;UBERON:0001049,4.07e-10,52;UBERON:0005068,4.07e-10,52;UBERON:0006241,4.07e-10,52;UBERON:0007135,4.07e-10,52;UBERON:0000955,2.90e-09,47;UBERON:0006238,2.90e-09,47;UBERON:0002616,2.93e-09,46;UBERON:0003080,1.02e-08,40;UBERON:0002780,1.99e-08,39;UBERON:0001890,1.99e-08,39;UBERON:0006240,1.99e-08,39 | |||
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| |||
|short_description=p3@Zfp451 | |||
}} |
Revision as of 20:14, 13 September 2013
Short description: | p3@Zfp451 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zfp451_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENSMUST00000125723_5end |
EntrezGene: | Zfp451 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.08e-07 | 39 |
electrically active cell | 1.08e-07 | 39 |
neuron | 3.02e-07 | 33 |
neuronal stem cell | 3.02e-07 | 33 |
neuroblast | 3.02e-07 | 33 |
electrically signaling cell | 3.02e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.32e-13 | 64 |
neural plate | 1.32e-13 | 64 |
presumptive neural plate | 1.32e-13 | 64 |
nervous system | 4.40e-12 | 75 |
central nervous system | 6.78e-12 | 73 |
ecto-epithelium | 2.50e-11 | 73 |
ectoderm-derived structure | 2.86e-11 | 95 |
ectoderm | 2.86e-11 | 95 |
presumptive ectoderm | 2.86e-11 | 95 |
structure with developmental contribution from neural crest | 3.10e-11 | 92 |
pre-chordal neural plate | 4.16e-11 | 49 |
regional part of nervous system | 5.91e-11 | 54 |
neural tube | 4.07e-10 | 52 |
neural rod | 4.07e-10 | 52 |
future spinal cord | 4.07e-10 | 52 |
neural keel | 4.07e-10 | 52 |
brain | 2.90e-09 | 47 |
future brain | 2.90e-09 | 47 |
regional part of brain | 2.93e-09 | 46 |
anterior neural tube | 1.02e-08 | 40 |
regional part of forebrain | 1.99e-08 | 39 |
forebrain | 1.99e-08 | 39 |
future forebrain | 1.99e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.