FFCP PHASE1:Mm9::chr1:88995134..88995174,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:88995134..88995174,-|id=chr1:88995134..88995174,-|ontology_enrichment_celltype=CL:0000239!5.09e-07!6;CL:0000677!5.09e-07!6;CL:0000212!5.09e-07!6;CL:0000584!5.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,5.82e-08,6;CL:0000677,5.82e-08,6;CL:0000584,5.82e-08,6;CL:0000075,7.76e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.49e-19!43;UBERON:0005409!8.52e-19!59;UBERON:0000344!4.66e-10!15;UBERON:0001242!2.04e-07!13;UBERON:0000060!2.04e-07!13;UBERON:0001262!2.04e-07!13;UBERON:0004786!2.04e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.04e-41,31;UBERON:0005409,4.55e-26,47;UBERON:0000344,5.29e-12,15;UBERON:0001007,3.64e-10,116;UBERON:0001555,3.64e-10,116;UBERON:0007026,3.64e-10,116;UBERON:0004119,6.49e-10,118;UBERON:0000925,6.49e-10,118;UBERON:0006595,6.49e-10,118;UBERON:0004921,3.30e-08,114;UBERON:0001242,6.34e-08,13;UBERON:0001262,6.34e-08,13;UBERON:0004786,6.34e-08,13;UBERON:0001155,1.45e-07,2;UBERON:0000059,1.45e-07,2;UBERON:0001962,2.60e-07,2;UBERON:0001961,2.60e-07,2;UBERON:0001744,2.60e-07,2;UBERON:0004923,4.71e-07,24|phase1_expression=0,1.04692622291808,2.27499619694768,2.11724947914781,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,3.21172993494038,0.57423196411502,1.7230479846363,1.29282739611533,2.47030445293286,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,15.8383374229327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8757489284563,12.164726066523,0,0,0,2.01683524623343,1.33426826306922,2.85338439168839,35.1151505542939,13.6700132420929,11.3100843960121,11.7384318504279,7.60359939764569,29.6610404855893,11.0230405436094,13.9398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,35.2691812322119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.87345025498471,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,1.22769312950907,0.154936841185966,0.192906610981141,0,0.467863216890817,2.14871054048298,0,0,0|short_description=p@chr1:88995134..88995174,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:88995134..88995174,- | |||
|id=chr1:88995134..88995174,- | |||
|ontology_enrichment_celltype=CL:0000239!5.09e-07!6;CL:0000677!5.09e-07!6;CL:0000212!5.09e-07!6;CL:0000584!5.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.82e-08,6;CL:0000677,5.82e-08,6;CL:0000584,5.82e-08,6;CL:0000075,7.76e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.49e-19!43;UBERON:0005409!8.52e-19!59;UBERON:0000344!4.66e-10!15;UBERON:0001242!2.04e-07!13;UBERON:0000060!2.04e-07!13;UBERON:0001262!2.04e-07!13;UBERON:0004786!2.04e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.04e-41,31;UBERON:0005409,4.55e-26,47;UBERON:0000344,5.29e-12,15;UBERON:0001007,3.64e-10,116;UBERON:0001555,3.64e-10,116;UBERON:0007026,3.64e-10,116;UBERON:0004119,6.49e-10,118;UBERON:0000925,6.49e-10,118;UBERON:0006595,6.49e-10,118;UBERON:0004921,3.30e-08,114;UBERON:0001242,6.34e-08,13;UBERON:0001262,6.34e-08,13;UBERON:0004786,6.34e-08,13;UBERON:0001155,1.45e-07,2;UBERON:0000059,1.45e-07,2;UBERON:0001962,2.60e-07,2;UBERON:0001961,2.60e-07,2;UBERON:0001744,2.60e-07,2;UBERON:0004923,4.71e-07,24 | |||
|phase1_expression=0,1.04692622291808,2.27499619694768,2.11724947914781,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,3.21172993494038,0.57423196411502,1.7230479846363,1.29282739611533,2.47030445293286,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,15.8383374229327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8757489284563,12.164726066523,0,0,0,2.01683524623343,1.33426826306922,2.85338439168839,35.1151505542939,13.6700132420929,11.3100843960121,11.7384318504279,7.60359939764569,29.6610404855893,11.0230405436094,13.9398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,35.2691812322119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.87345025498471,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,1.22769312950907,0.154936841185966,0.192906610981141,0,0.467863216890817,2.14871054048298,0,0,0 | |||
|short_description=p@chr1:88995134..88995174,- | |||
}} |
Revision as of 21:09, 13 September 2013
Short description: | p@chr1:88995134..88995174, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88995134..88995174, - |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.82e-08 | 6 |
gut absorptive cell | 5.82e-08 | 6 |
enterocyte | 5.82e-08 | 6 |
columnar/cuboidal epithelial cell | 7.76e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.04e-41 | 31 |
gastrointestinal system | 4.55e-26 | 47 |
mucosa | 5.29e-12 | 15 |
digestive system | 3.64e-10 | 116 |
digestive tract | 3.64e-10 | 116 |
primitive gut | 3.64e-10 | 116 |
endoderm-derived structure | 6.49e-10 | 118 |
endoderm | 6.49e-10 | 118 |
presumptive endoderm | 6.49e-10 | 118 |
subdivision of digestive tract | 3.30e-08 | 114 |
intestinal mucosa | 6.34e-08 | 13 |
wall of intestine | 6.34e-08 | 13 |
gastrointestinal system mucosa | 6.34e-08 | 13 |
colon | 1.45e-07 | 2 |
large intestine | 1.45e-07 | 2 |
gut-associated lymphoid tissue | 2.60e-07 | 2 |
mucosa-associated lymphoid tissue | 2.60e-07 | 2 |
lymphoid tissue | 2.60e-07 | 2 |
organ component layer | 4.71e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.